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UMI support in WGTS mode #73

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SPPearce opened this issue Jul 31, 2024 · 1 comment
Open

UMI support in WGTS mode #73

SPPearce opened this issue Jul 31, 2024 · 1 comment
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enhancement New feature or request

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@SPPearce
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Description of feature

I have WGS data generated with a library prep that includes UMIs (Claret Biosciences SRSLY for FFPE.
The current pipeline code does not allow for umis in the wgts mode, only in the targeted mode.
@SPPearce SPPearce added the enhancement New feature or request label Jul 31, 2024
@scwatts
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scwatts commented Jul 31, 2024

Hi @SPPearce thanks for opening the issue. We'll have support for this functionality in an official nf-core release soon - stay tuned!

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@scwatts @SPPearce