Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Create ploidy and cnv models for GATK's germline cnv calling pipeline #2

Closed
ramprasadn opened this issue Jul 6, 2023 · 1 comment
Closed
Labels
enhancement New feature or request

Comments

@ramprasadn
Copy link
Collaborator

Description of feature

Running GATK's germline calling pipeline requires a ploidy model (created using GATK DetermineGermlineContigPloidy) and a cnv model (created using GATK GermlineCNVCaller). More details on how to create these models can be found here.

@ramprasadn ramprasadn added the enhancement New feature or request label Jul 6, 2023
@ramprasadn
Copy link
Collaborator Author

Done! #19

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

1 participant