From d8a851f47783d9f524fe3ddb831a80b98e0c3cfb Mon Sep 17 00:00:00 2001 From: Daniel Lundin Date: Wed, 24 Jul 2024 11:23:09 +0200 Subject: [PATCH] Move table name --- modules/local/qiime2_ancom_tax.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/local/qiime2_ancom_tax.nf b/modules/local/qiime2_ancom_tax.nf index e49cfb3a..686a5bac 100644 --- a/modules/local/qiime2_ancom_tax.nf +++ b/modules/local/qiime2_ancom_tax.nf @@ -43,7 +43,7 @@ process QIIME2_ANCOM_TAX { --to-tsv if [ \$(grep -v '^#' -c ${table.baseName}-level-${taxlevel}.feature-table.tsv) -lt 2 ]; then - echo ${taxlevel} > ancom/"${table.baseName}_WARNING_Summing_your_data_at_taxonomic_level_${taxlevel}_produced_less_than_two_rows_(taxa)_ANCOM_cant_proceed_--_did_you_specify_a_bad_reference_taxonomy.txt" + echo ${taxlevel} > ancom/"WARNING_${table.baseName}_Summing_your_data_at_taxonomic_level_${taxlevel}_produced_less_than_two_rows_(taxa)_ANCOM_cant_proceed_--_did_you_specify_a_bad_reference_taxonomy.txt" else qiime composition add-pseudocount \\ --i-table lvl${taxlevel}-${table} \\