diff --git a/CHANGES.md b/CHANGES.md index 147292c51..2f7a8f867 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -14,11 +14,14 @@ ### Bug fixes +* Certain strain names would be silently renamed by `augur tree [--method iqtree]`. We now avoid such renaming wherever possible and in cases where there are backslashes or single quotes we now raise a fatal error. +Note that names with spaces in the FASTA header (description line) continue to be modified such that everything after the first space is not used in the resulting tree. [#1750][] (@jameshadfield) * Fixed the error that occurred when running `augur curate --help`. [#1755][] (@joverlee521) [#1744]: https://github.com/nextstrain/augur/pull/1744 [#1745]: https://github.com/nextstrain/augur/pull/1745 [#1755]: https://github.com/nextstrain/augur/pull/1755 +[#1750]: https://github.com/nextstrain/augur/pull/1750 ## 28.0.1 (10 February 2025)