From 2dcee004a8b5dd295b8f9ee7d65ab3301252478f Mon Sep 17 00:00:00 2001
From: Christopher Hakkaart <chris.hakkaart@seqera.io>
Date: Thu, 12 Sep 2024 08:46:37 +0200
Subject: [PATCH 1/2] Create devcontainer.json

---
 .devcontainer/devcontainer.json | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)
 create mode 100644 .devcontainer/devcontainer.json

diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json
new file mode 100644
index 00000000..ea27a584
--- /dev/null
+++ b/.devcontainer/devcontainer.json
@@ -0,0 +1,27 @@
+{
+    "name": "nfcore",
+    "image": "nfcore/gitpod:latest",
+    "remoteUser": "gitpod",
+
+    // Configure tool-specific properties.
+    "customizations": {
+        // Configure properties specific to VS Code.
+        "vscode": {
+            // Set *default* container specific settings.json values on container create.
+            "settings": {
+                "python.defaultInterpreterPath": "/opt/conda/bin/python",
+                "python.linting.enabled": true,
+                "python.linting.pylintEnabled": true,
+                "python.formatting.autopep8Path": "/opt/conda/bin/autopep8",
+                "python.formatting.yapfPath": "/opt/conda/bin/yapf",
+                "python.linting.flake8Path": "/opt/conda/bin/flake8",
+                "python.linting.pycodestylePath": "/opt/conda/bin/pycodestyle",
+                "python.linting.pydocstylePath": "/opt/conda/bin/pydocstyle",
+                "python.linting.pylintPath": "/opt/conda/bin/pylint"
+            },
+
+            // Add the IDs of extensions you want installed when the container is created.
+            "extensions": ["ms-python.python", "ms-python.vscode-pylance", "nf-core.nf-core-extensionpack"]
+        }
+    }
+}

From ff7392c80618167cb50004f9471eb4d9228d0e21 Mon Sep 17 00:00:00 2001
From: Christopher Hakkaart <chris.hakkaart@seqera.io>
Date: Thu, 12 Sep 2024 09:48:29 +0200
Subject: [PATCH 2/2] Update .devcontainer/devcontainer.json

Co-authored-by: Adam Talbot <12817534+adamrtalbot@users.noreply.github.com>
---
 .devcontainer/devcontainer.json | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json
index ea27a584..f8592a1d 100644
--- a/.devcontainer/devcontainer.json
+++ b/.devcontainer/devcontainer.json
@@ -23,5 +23,11 @@
             // Add the IDs of extensions you want installed when the container is created.
             "extensions": ["ms-python.python", "ms-python.vscode-pylance", "nf-core.nf-core-extensionpack"]
         }
+    },
+    "portsAttributes": {
+        "3000": {
+            "label": "Application",
+            "onAutoForward": "openPreview"
+        }
     }
 }