diff --git a/docs/nextflow_schema/nextflow_schema_examples.md b/docs/nextflow_schema/nextflow_schema_examples.md index 637a3c3..bfc8daa 100644 --- a/docs/nextflow_schema/nextflow_schema_examples.md +++ b/docs/nextflow_schema/nextflow_schema_examples.md @@ -13,7 +13,7 @@ It is used as a test fixture in the nf-schemakage [here](https://github.com/next !!! note - More examples can be found in the plugin [`testResources` directory](https://github.com/nextflow-io/nf-schemab/master/plugins/nf-snf-schematResources/). + More examples can be found in the plugin [`testResources` directory](https://github.com/nextflow-io/nf-schema/blob/master/plugins/nf-schema/src/testResources/). ```json --8<-- "plugins/nf-schema/testResources/nextflow_schema.json" diff --git a/docs/nextflow_schema/sample_sheet_schema_specification.md b/docs/nextflow_schema/sample_sheet_schema_specification.md index 3c19474..f0170bc 100644 --- a/docs/nextflow_schema/sample_sheet_schema_specification.md +++ b/docs/nextflow_schema/sample_sheet_schema_specification.md @@ -4,7 +4,7 @@ description: Schema specification for sample sheet validation # Sample sheet schema specification -Sample sheet schema files are used by the nf-schemagin for validation of sample sheet contents and type conversion / channel generation. +Sample sheet schema files are used by the nf-schema plugin for validation of sample sheet contents and type conversion / channel generation. The Nextflow schema syntax is based on the JSON schema standard. You can find more information about JSON Schema here: @@ -94,4 +94,4 @@ For example: ``` will convert the `field` value to a meta value, resulting in the channel `[[id:value]...]` -See [here](https://github.com/nextflow-io/nf-schemab/ce3aef60e5103ea4798375fe6c59bae41b7d2a25/plugins/nf-scheschemctResources/schema_input.json#L10-L25) for an example in the sample sheet. +See [here](https://github.com/nextflow-io/nf-schema/blob/ce3aef60e5103ea4798375fe6c59bae41b7d2a25/plugins/nf-schema/src/testResources/schema_input.json#L10-L25) for an example in the sample sheet. diff --git a/docs/schema_input.json b/docs/schema_input.json index 15f835a..fbeb742 100644 --- a/docs/schema_input.json +++ b/docs/schema_input.json @@ -1,6 +1,6 @@ { "$schema": "https://json-schema.org/draft/2020-12/schema", - "$id": "https://raw.githubusercontent.com/nextflow-io/nf-schemater/plugins/nf-snf-schematResources/schema_input.json", + "$id": "https://raw.githubusercontent.com/nextflow-io/nf-schema/master/plugins/nf-schema/src/testResources/schema_input.json", "title": "Samplesheet validation schema", "description": "Schema for the samplesheet used in this pipeline", "type": "object", diff --git a/examples/fromSamplesheetMeta/pipeline/assets/schema_input.json b/examples/fromSamplesheetMeta/pipeline/assets/schema_input.json index e5c7b8e..7a931a2 100644 --- a/examples/fromSamplesheetMeta/pipeline/assets/schema_input.json +++ b/examples/fromSamplesheetMeta/pipeline/assets/schema_input.json @@ -1,7 +1,7 @@ { "$schema": "https://json-schema.org/draft/2020-12/schema", - "$id": "https://raw.githubusercontent.com/nf-schemample/master/assets/schema_input.json", - "title": "nf-schemample - params.input schema", + "$id": "https://raw.githubusercontent.com/nf-schema/example/master/assets/schema_input.json", + "title": "nf-schema example - params.input schema", "description": "Schema for the file provided with params.input", "type": "array", "items": {