From 8cdce51926b1138282c8ed2cd3043abdf24a07bc Mon Sep 17 00:00:00 2001
From: Alejandro de la Vega <aleph4@gmail.com>
Date: Thu, 15 Jul 2021 16:56:28 -0500
Subject: [PATCH 1/4] Ignore regressor JSONs

---
 neuroscout_cli/commands/run.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/neuroscout_cli/commands/run.py b/neuroscout_cli/commands/run.py
index 9a9437f..3f506e0 100644
--- a/neuroscout_cli/commands/run.py
+++ b/neuroscout_cli/commands/run.py
@@ -43,7 +43,7 @@ def run(self, upload_only=False):
                 str(out_dir),
                 'dataset',
                 f'--model={model_path}',
-                '--ignore=/(.*desc-confounds_regressors.tsv)/',
+                '--ignore=/(.*desc-confounds_regressors.*)/',
                 f'--derivatives={str(self.bundle_dir.absolute())} {str(self.preproc_dir.absolute())}',
                 f'--smoothing={smoothing}:Dataset',
                 f'--estimator={estimator}'

From a43631a1ae1819e2301c4d7597125ef9444eb341 Mon Sep 17 00:00:00 2001
From: Alejandro de la Vega <aleph4@gmail.com>
Date: Tue, 10 Aug 2021 17:53:04 -0500
Subject: [PATCH 2/4] Fix re match

---
 Dockerfile                     | 2 +-
 neuroscout_cli/commands/run.py | 4 ++--
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index a96354e..0d2431d 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,4 @@
-FROM poldracklab/fitlins:0.9.1
+FROM poldracklab/fitlins:0.9.2
 
 # Set user back to root
 USER root
diff --git a/neuroscout_cli/commands/run.py b/neuroscout_cli/commands/run.py
index 3f506e0..95d168b 100644
--- a/neuroscout_cli/commands/run.py
+++ b/neuroscout_cli/commands/run.py
@@ -109,11 +109,11 @@ def run(self, upload_only=False):
 
             group = [str(i) for i in images.glob('*statmap.nii.gz')
                      if re.match(
-                         '.*stat-[t|F|variance|effect]+.*', i.name)]
+                         '.*stat-(t|F|variance|effect)+.*', i.name)]
 
             if neurovault == 'all':
                 sub = [str(i) for i in images.glob('sub*/*statmap.nii.gz')
-                       if re.match('.*stat-[variance|effect]+.*', i.name)]
+                       if re.match('.*stat-(variance|effect)+.*', i.name)]
             else:
                 sub = None
 

From b0dc1a76854447770893fc2729ff28ef5e0585c7 Mon Sep 17 00:00:00 2001
From: Alejandro de la Vega <aleph4@gmail.com>
Date: Wed, 11 Aug 2021 13:15:16 -0500
Subject: [PATCH 3/4] Update requirements.txt

---
 requirements.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/requirements.txt b/requirements.txt
index 5e7d4cb..c84f857 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,5 +1,5 @@
 docopt==0.6.2
 datalad==0.10.2
 tqdm
-pyns==0.4.6
+pyns==0.4.7
 git+https://github.com/bids-standard/pybids.git@maint/0.13.x 

From 9a11616f9911961cf67fe4426a9bbd710d17a1fc Mon Sep 17 00:00:00 2001
From: Alejandro de la Vega <aleph4@gmail.com>
Date: Wed, 11 Aug 2021 13:37:06 -0500
Subject: [PATCH 4/4] Update __init__.py

---
 neuroscout_cli/__init__.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/neuroscout_cli/__init__.py b/neuroscout_cli/__init__.py
index 45869b6..ed7d50e 100644
--- a/neuroscout_cli/__init__.py
+++ b/neuroscout_cli/__init__.py
@@ -1 +1 @@
-__version__ = '0.5.2'
+__version__ = '0.5.3'