diff --git a/Dockerfile b/Dockerfile index bba956a..5dd6e19 100644 --- a/Dockerfile +++ b/Dockerfile @@ -38,7 +38,7 @@ RUN apt-get update \ libcairo2-dev \ libtiff5-dev \ libreadline-dev \ - libgsl0-dev \ + libgsl-dev \ libgslcblas0 \ libgtk2.0-dev \ libgl1-mesa-dev \ @@ -111,7 +111,7 @@ RUN pip install stratocumulus \ && rm -rf /tmp/* -RUN install2.r -e \ +RUN install2.r -e -t source \ argparse \ assertthat \ BiocManager \ diff --git a/misc/requirements-bioc.R b/misc/requirements-bioc.R index 3146f12..2a9011c 100644 --- a/misc/requirements-bioc.R +++ b/misc/requirements-bioc.R @@ -23,4 +23,4 @@ bioc_pkgs<-c( ) requireNamespace("BiocManager") -BiocManager::install(bioc_pkgs, ask=F) +BiocManager::install(bioc_pkgs, ask=F, type = "source")