diff --git a/articles/bioconductor.html b/articles/bioconductor.html index fd9cea39..4c8a0546 100644 --- a/articles/bioconductor.html +++ b/articles/bioconductor.html @@ -184,7 +184,7 @@

## runner_os: ${{ runner.os }} ## cache_version: cache-v1 ## docker_registry: ghcr.io -
## Saving yaml ==> /tmp/RtmpDtcVeP/rworkflows.devel.yml
+
## Saving yaml ==> /tmp/RtmpVlpKZh/rworkflows.devel.yml

@@ -251,7 +251,7 @@

## runner_os: ${{ runner.os }} ## cache_version: cache-v1 ## docker_registry: ghcr.io -
## Saving yaml ==> /tmp/RtmpDtcVeP/rworkflows.RELEASE_3_17.yml
+
## Saving yaml ==> /tmp/RtmpVlpKZh/rworkflows.RELEASE_3_17.yml

diff --git a/articles/rworkflows.html b/articles/rworkflows.html index 8d23c9b6..95405578 100644 --- a/articles/rworkflows.html +++ b/articles/rworkflows.html @@ -148,7 +148,7 @@

dynamic action force_new = TRUE, ## Use default save_dir in practice save_dir = tempdir())

-
## Saving yaml ==> /tmp/RtmpWM2f8I/rworkflows.yml
+
## Saving yaml ==> /tmp/RtmpFVft2I/rworkflows.yml

static workflow @@ -165,7 +165,7 @@

static workflow force_new = TRUE, ## Use default save_dir in practice save_dir = tempdir())

-
## Saving yaml ==> /tmp/RtmpWM2f8I/rworkflows_static.yml
+
## Saving yaml ==> /tmp/RtmpFVft2I/rworkflows_static.yml
@@ -207,7 +207,7 @@ 

 ## Use default save_dir in practice
 dockerfile <- rworkflows::use_dockerfile(save_dir = tempdir())
-
## Creating new Docker file ==> /tmp/RtmpWM2f8I/Dockerfile
+
## Creating new Docker file ==> /tmp/RtmpFVft2I/Dockerfile

Templates @@ -225,7 +225,7 @@

README 
 ## Use default save_dir in practice
 readme <- rworkflows::use_readme(save_dir = tempdir())
-
## Creating new README file ==> /tmp/RtmpWM2f8I/README.Rmd
+
## Creating new README file ==> /tmp/RtmpFVft2I/README.Rmd

Vignette: Get started @@ -236,7 +236,7 @@

Vignette: Get started## Use default save_dir in practice vignette1 <- rworkflows::use_vignette_getstarted(package = "mypackage", save_dir = tempdir())

-
## Creating new vignette file ==> /tmp/RtmpWM2f8I/vignettes/mypackage.Rmd
+
## Creating new vignette file ==> /tmp/RtmpFVft2I/vignettes/mypackage.Rmd

Vignette: docker @@ -259,7 +259,7 @@

Vignette: docker## Use default save_dir in practice vignette2 <- rworkflows::use_vignette_docker(docker_org = "neurogenomics", save_dir = tempdir())

-
## Creating new vignette file ==> /tmp/RtmpWM2f8I/vignettes/docker.Rmd
+
## Creating new vignette file ==> /tmp/RtmpFVft2I/vignettes/docker.Rmd
@@ -347,7 +347,7 @@

Using Python## runner_os: ${{ runner.os }} ## cache_version: cache-v1 ## docker_registry: ghcr.io -
## Saving yaml ==> /tmp/RtmpWM2f8I/rworkflows.yml
+
## Saving yaml ==> /tmp/RtmpFVft2I/rworkflows.yml

Using conda @@ -460,7 +460,7 @@

Using conda## docker_registry: ghcr.io ## miniforge_variant: '' ## environment_file: /__w/rworkflows/rworkflows/myenv_conda.yml -
## Saving yaml ==> /tmp/RtmpWM2f8I/rworkflows.yml
+
## Saving yaml ==> /tmp/RtmpFVft2I/rworkflows.yml
 ## Cleanup files
 try({file.remove(environment_file)})
diff --git a/reference/construct_conda_yml.html b/reference/construct_conda_yml.html index 3f3e3670..c174da38 100644 --- a/reference/construct_conda_yml.html +++ b/reference/construct_conda_yml.html @@ -141,7 +141,7 @@

Examples

return_path = FALSE, ## Writing to temp only for example save_path=tempfile(fileext="myenv_conda.yml")) -#> Saving yaml ==> /tmp/RtmpcKOJic/file4b231738488cmyenv_conda.yml +#> Saving yaml ==> /tmp/RtmphskH8X/file4ad934bb80d3myenv_conda.yml
diff --git a/reference/fill_description.html b/reference/fill_description.html index 9b851865..84a827ea 100644 --- a/reference/fill_description.html +++ b/reference/fill_description.html @@ -282,7 +282,7 @@

Examples

#> Updating: biocViews --> Genetics, SystemsBiology #> Updating: URL --> https://github.com/OwnerName/MyPackageName #> Updating: BugReports --> https://github.com/OwnerName/MyPackageName/issues -#> Saving updated file: /tmp/RtmpcKOJic/file4b23345d694fDESCRIPTION +#> Saving updated file: /tmp/RtmphskH8X/file4ad941b45de0DESCRIPTION diff --git a/reference/is_gha.html b/reference/is_gha.html index 08d13d86..9b246f46 100644 --- a/reference/is_gha.html +++ b/reference/is_gha.html @@ -105,7 +105,7 @@

Value

Examples

is_gha()
-#> Currently running on GITHUB_ACTION: __run_22
+#> Currently running on GITHUB_ACTION: __neurogenomics_rworkflows
 #> [1] TRUE
diff --git a/reference/use_codespace.html b/reference/use_codespace.html index b5fc6aa8..cabf85f1 100644 --- a/reference/use_codespace.html +++ b/reference/use_codespace.html @@ -145,7 +145,7 @@

Value

Examples

path <- use_codespace(save_dir=tempdir())
-#> Creating new dev container config file ==> /tmp/RtmpcKOJic/devcontainer.json
+#> Creating new dev container config file ==> /tmp/RtmphskH8X/devcontainer.json
diff --git a/reference/use_dockerfile.html b/reference/use_dockerfile.html index 64be9492..a3ab070a 100644 --- a/reference/use_dockerfile.html +++ b/reference/use_dockerfile.html @@ -124,7 +124,7 @@

Value

Examples

path <- use_dockerfile(save_dir=tempdir())
-#> Creating new Docker file ==> /tmp/RtmpcKOJic/Dockerfile
+#> Creating new Docker file ==> /tmp/RtmphskH8X/Dockerfile
diff --git a/reference/use_issue_template.html b/reference/use_issue_template.html index 6215c558..975e3d49 100644 --- a/reference/use_issue_template.html +++ b/reference/use_issue_template.html @@ -122,8 +122,8 @@

Value

Examples

path <- use_issue_template(save_dir=tempdir())
-#> Creating new Issue Template ==> /tmp/RtmpcKOJic/bug_report.md
-#> Creating new Issue Template ==> /tmp/RtmpcKOJic/feature_request.md
+#> Creating new Issue Template ==> /tmp/RtmphskH8X/bug_report.md
+#> Creating new Issue Template ==> /tmp/RtmphskH8X/feature_request.md
diff --git a/reference/use_readme.html b/reference/use_readme.html index 63538944..50fd3267 100644 --- a/reference/use_readme.html +++ b/reference/use_readme.html @@ -120,7 +120,7 @@

Value

Examples

## use default save_dir in practice
 path <- use_readme(save_dir = tempdir()) 
-#> Creating new README file ==> /tmp/RtmpcKOJic/README.Rmd
+#> Creating new README file ==> /tmp/RtmphskH8X/README.Rmd
diff --git a/reference/use_vignette_docker.html b/reference/use_vignette_docker.html index 30ee828e..28d3ad69 100644 --- a/reference/use_vignette_docker.html +++ b/reference/use_vignette_docker.html @@ -194,7 +194,7 @@

Examples

docker_org = "neurogenomics", ## use default save_dir in practice save_dir = tempdir()) -#> Creating new vignette file ==> /tmp/RtmpcKOJic/vignettes/docker.Rmd +#> Creating new vignette file ==> /tmp/RtmphskH8X/vignettes/docker.Rmd diff --git a/reference/use_vignette_getstarted.html b/reference/use_vignette_getstarted.html index 5dfe8a63..b8cb4c61 100644 --- a/reference/use_vignette_getstarted.html +++ b/reference/use_vignette_getstarted.html @@ -141,7 +141,7 @@

Examples

path <- use_vignette_getstarted(package = "mypackage",
                                 ## use default save_dir in practice
                                 save_dir = tempdir())
-#> Creating new vignette file ==> /tmp/RtmpcKOJic/vignettes/mypackage.Rmd
+#> Creating new vignette file ==> /tmp/RtmphskH8X/vignettes/mypackage.Rmd
diff --git a/reference/use_workflow.html b/reference/use_workflow.html index 8b470917..2231bc86 100644 --- a/reference/use_workflow.html +++ b/reference/use_workflow.html @@ -380,7 +380,7 @@

Value

Examples

path <- use_workflow(save_dir = file.path(tempdir(),".github","workflows"))
-#> Saving yaml ==> /tmp/RtmpcKOJic/.github/workflows/rworkflows.yml
+#> Saving yaml ==> /tmp/RtmphskH8X/.github/workflows/rworkflows.yml