From 9352118265c3c3980c0c2bca059f49c8cbec8bea Mon Sep 17 00:00:00 2001 From: "Brian M. Schilder" <34280215+bschilder@users.noreply.github.com> Date: Thu, 1 Feb 2024 11:09:41 +0000 Subject: [PATCH] update readme cran badge [skip ci] --- .Rhistory | 46 ++++++++++++++++---------------- README.Rmd | 4 ++- README.md | 19 ++++++------- tests/testthat/test-check_cont.R | 8 +++--- 4 files changed, 41 insertions(+), 36 deletions(-) diff --git a/.Rhistory b/.Rhistory index 5dfdbe65..fc99a7ec 100644 --- a/.Rhistory +++ b/.Rhistory @@ -1,26 +1,3 @@ -) -) -customizations -jsn$customizations -customizations=list( -vscode=list( -settings=list(), -extensions= -list("reditorsupport.r", -"visualstudioexptteam.vscodeintellicode", -"ionutvmi.path-autocomplete") -) -) -customizations -jsn$customizations -cat(paste(readLines(path),collapse ="\n")) -devtools::check_man() -library(rworkflows) -usethis::use_test() -library(rworkflows) -path <- use_codespace(save_dir=tempdir()) -testthat::expect_true(file.exists(path)) -jsonlite::read_json(path) jsn <- jsonlite::read_json(path) names(jsn) testthat::expect_true( @@ -510,3 +487,26 @@ testthat::expect_true(length(deps)>10) 2500/3 devtools::check_man() library(rworkflows) +testthat::skip_on_cran() +?testthat::skip_on_cran() +testthat::skip_if_offline() +devtools::check_man() +library(rworkflows) +devtools::build_manual() +devtools::build_manual(path = "inst/") +?rworkflows::construct_runners() +?rworkflows::construct_runners( bioc = list("release", "release", "release"), +) +rworkflows::construct_runners( bioc = list("release", "release", "release"), +) +rworkflows::construct_cont() +rworkflows::construct_cont(default_tag = "release") +devtools::test_coverage() +devtools::test_coverage() +devtools::test_coverage() +devtools::test_coverage() +devtools::test_coverage() +library(rworkflows) +?testthat::skip_on_cran() +testthat::skip_if_offline() +readLines("https://hub.docker.com/v2/repositories//bioconductor/bioconductor_docker/tags?page_size=1000") diff --git a/README.Rmd b/README.Rmd index f8f01eff..44a29445 100644 --- a/README.Rmd +++ b/README.Rmd @@ -1,11 +1,13 @@ --- title: "" -author: "`r rworkflows::use_badges(add_actions=c('rworkflows','rworkflows_static','rworkflows_dev'), add_cran_release = TRUE, add_cran_checks = TRUE, add_cran_download_month=TRUE, add_cran_download_total=TRUE, add_codecov_graphs='icicle', hex_height=350, add_doi='https://doi.org/10.5281/zenodo.10048573')`" +author: "`r rworkflows::use_badges(add_actions=c('rworkflows','rworkflows_static','rworkflows_dev'), add_cran_release = TRUE, add_cran_checks = FALSE, add_cran_download_month=TRUE, add_cran_download_total=TRUE, add_codecov_graphs='icicle', hex_height=350, add_doi='https://doi.org/10.5281/zenodo.10048573')`" date: "

README updated: `r format( Sys.Date(), '%b-%d-%Y')`

" output: github_document --- +[![CRAN checks](https://badges.cranchecks.info/worst/rworkflows.svg)](https://cran.r-project.org/web/checks/check_results_rworkflows.html) + ```{r setup, include=FALSE} pkg <- read.dcf("DESCRIPTION", fields = "Package")[1] ``` diff --git a/README.md b/README.md index 73704c86..dad2b3a2 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,5 @@
[![](https://www.r-pkg.org/badges/version/rworkflows?color=black)](https://cran.r-project.org/package=rworkflows) -[![CRAN -checks](https://badges.cranchecks.info/summary/rworkflows.svg)](https://cran.r-project.org/web/checks/check_results_rworkflows.html) [![](http://cranlogs.r-pkg.org/badges/last-month/rworkflows?color=black)](https://cran.r-project.org/package=rworkflows) [![](http://cranlogs.r-pkg.org/badges/grand-total/rworkflows?color=black)](https://cran.r-project.org/package=rworkflows) [![License: @@ -24,9 +22,12 @@ status](https://github.com/neurogenomics/rworkflows/workflows/rworkflows_dev/bad Authors: Brian Schilder, Alan Murphy, Nathan Skene

-README updated: Jan-02-2024 +README updated: Feb-01-2024

+[![CRAN +checks](https://badges.cranchecks.info/worst/rworkflows.svg)](https://cran.r-project.org/web/checks/check_results_rworkflows.html) + ## Citation If you use `rworkflows`, please cite: @@ -288,7 +289,7 @@ utils::sessionInfo() ## R version 4.3.1 (2023-06-16) ## Platform: aarch64-apple-darwin20 (64-bit) - ## Running under: macOS Sonoma 14.2.1 + ## Running under: macOS Sonoma 14.3 ## ## Matrix products: default ## BLAS: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRblas.0.dylib @@ -297,7 +298,7 @@ utils::sessionInfo() ## locale: ## [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 ## - ## time zone: America/New_York + ## time zone: Europe/London ## tzcode source: internal ## ## attached base packages: @@ -309,15 +310,15 @@ utils::sessionInfo() ## [7] tidyselect_1.2.0 rvcheck_0.2.1 scales_1.3.0 ## [10] yaml_2.3.8 fastmap_1.1.1 here_1.0.1 ## [13] ggplot2_3.4.4 R6_2.5.1 generics_0.1.3 - ## [16] knitr_1.45 yulab.utils_0.1.2 tibble_3.2.1 + ## [16] knitr_1.45 yulab.utils_0.1.3 tibble_3.2.1 ## [19] desc_1.4.3 dlstats_0.1.7 rprojroot_2.0.4 ## [22] munsell_0.5.0 pillar_1.9.0 RColorBrewer_1.1-3 - ## [25] rlang_1.1.2 utf8_1.2.4 cachem_1.0.8 + ## [25] rlang_1.1.3 utf8_1.2.4 cachem_1.0.8 ## [28] badger_0.2.3 xfun_0.41 fs_1.6.3 ## [31] memoise_2.0.1.9000 cli_3.6.2 magrittr_2.0.3 - ## [34] rworkflows_1.0.1 digest_0.6.33 grid_4.3.1 + ## [34] rworkflows_1.0.1 digest_0.6.34 grid_4.3.1 ## [37] rstudioapi_0.15.0 lifecycle_1.0.4 vctrs_0.6.5 - ## [40] data.table_1.14.10 evaluate_0.23 glue_1.6.2 + ## [40] data.table_1.14.10 evaluate_0.23 glue_1.7.0 ## [43] fansi_1.0.6 colorspace_2.1-0 rmarkdown_2.25 ## [46] tools_4.3.1 pkgconfig_2.0.3 htmltools_0.5.7 diff --git a/tests/testthat/test-check_cont.R b/tests/testthat/test-check_cont.R index c3b8e54e..94b7129d 100644 --- a/tests/testthat/test-check_cont.R +++ b/tests/testthat/test-check_cont.R @@ -1,6 +1,9 @@ test_that("check_cont works", { ## Don't run on CRAN servers due to ongoing internet connectivity issues - if(!is_gha()) testthat::skip_if_offline() + if(!is_gha()) { + testthat::skip_if_offline() + testthat::skip_on_cran() + } testthat::expect_no_warning( check_cont(cont = "bioconductor/bioconductor_docker:devel") @@ -23,8 +26,7 @@ test_that("check_cont works", { #### Include registry #### testthat::expect_no_warning( check_cont(cont = "ghcr.io/bioconductor/bioconductor_docker") - ) - + ) testthat::expect_no_warning( check_cont(cont = "docker.io/bioconductor/bioconductor_docker:devel") )