diff --git a/docs/dictionaries.md b/docs/dictionaries.md index 8e90f80e..3e5bdd87 100644 --- a/docs/dictionaries.md +++ b/docs/dictionaries.md @@ -118,7 +118,8 @@ syntax for [json-ld](https://w3c.github.io/json-ld-syntax/#the-context): { "@context": { "nb": "http://neurobagel.org/vocab/", - "purl": "http://purl.obolibrary.org/obo/", + "ncit": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#", + "nidm": "http://purl.org/nidash/nidm#", "snomed": "http://purl.bioontology.org/ontology/SNOMEDCT/", "cogatlas": "https://www.cognitiveatlas.org/task/id/" } @@ -208,7 +209,7 @@ Terms from the National Cancer Institute Thesaurus for healthy control status. "Label": "Parkinson's disease" }, "CTRL": { - "TermURL": "purl:NCIT_C94342", + "TermURL": "ncit:C94342", "Label": "Healthy Control" } } diff --git a/docs/term_naming_standards.md b/docs/term_naming_standards.md index ef5bed47..db579e83 100644 --- a/docs/term_naming_standards.md +++ b/docs/term_naming_standards.md @@ -27,13 +27,14 @@ What this might look like in semantic triples: In cases where we reuse a term for a class that comes from an existing controlled vocabulary, and that vocabulary follows a different naming convention (e.g., all lowercase), we should follow the existing naming convention. ## Currently used namespaces -| Prefix | IRI | Types of terms | -| ---------- | ---------------------------------------------- | ----------------------------------------- | -| `nb` | http://neurobagel.org/vocab/ | Neurobagel-"owned" properties and classes | -| `nbg` | http://neurobagel.org/graph/ | Neurobagel graph databases | -| `snomed` | http://purl.bioontology.org/ontology/SNOMEDCT/ | diagnosis and sex values | -| `nidm` | http://purl.org/nidash/nidm# | imaging modalities | -| `cogatlas` | https://www.cognitiveatlas.org/task/id/ | cognitive assessments and tasks | +| Prefix | IRI | Types of terms | +| ---------- | --------------------------------------------------- | ----------------------------------------- | +| `nb` | http://neurobagel.org/vocab/ | Neurobagel-"owned" properties and classes | +| `nbg` | http://neurobagel.org/graph/ | Neurobagel graph databases | +| `snomed` | http://purl.bioontology.org/ontology/SNOMEDCT/ | diagnosis and sex values | +| `ncit` | http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl# | group designation (e.g., healthy control) | +| `nidm` | http://purl.org/nidash/nidm# | imaging modalities | +| `cogatlas` | https://www.cognitiveatlas.org/task/id/ | cognitive assessments and tasks | ## What if an `nb` term already exists in another controlled vocabulary?