From 5329115d84458ec39f66b8696ee4dc039acdfd99 Mon Sep 17 00:00:00 2001 From: Adam Taylor Date: Tue, 10 Oct 2023 14:55:21 +0100 Subject: [PATCH] Add Docker image info to README --- README.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/README.md b/README.md index 6da0975..84964b1 100644 --- a/README.md +++ b/README.md @@ -40,3 +40,10 @@ By default this outputs into a new directory called `outputs` in your current wo - `outdir`: Directory for outputs (default: "`outputs`") - `suffix`: Suffix for output files (default: "`_htan`") + +### Docker images + +This workflow uses two existing Docker images that support other HTAN pipelines + +- [nf-artist](https://github.com/Sage-Bionetworks-Workflows/nf-artist/pkgs/container/nf-artist): This image is used for the conversion step +- [nf-imagecleaner](https://github.com/ncihtan/nf-imagecleaner/pkgs/container/nf-imagecleaner/115612162?tag=latest): This image is used for the deidentification steps