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napari-aideveloper.json
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napari-aideveloper.json
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{
"name": "napari-aideveloper",
"display_name": "napari AIDeveloper",
"visibility": "public",
"icon": "",
"categories": [],
"schema_version": "0.2.1",
"on_activate": null,
"on_deactivate": null,
"contributions": {
"commands": [
{
"id": "napari-aideveloper.make_qwidget",
"title": "Make example QWidget",
"python_name": "napari_aideveloper._widget:AIDeveloper",
"short_title": null,
"category": null,
"icon": null,
"enablement": null
}
],
"readers": null,
"writers": null,
"widgets": [
{
"command": "napari-aideveloper.make_qwidget",
"display_name": "AIDeveloper",
"autogenerate": false
}
],
"sample_data": null,
"themes": null,
"menus": {},
"submenus": null,
"keybindings": null,
"configuration": []
},
"package_metadata": {
"metadata_version": "2.1",
"name": "napari-aideveloper",
"version": "0.0.4",
"dynamic": null,
"platform": null,
"supported_platform": null,
"summary": "napari_aideveloper is a napari-plugin deived from AIDeveloper that allows you to train, evaluate and apply deep neural nets for image classification within a graphical user-interface (GUI).",
"description": "# napari-aideveloper\n\n[![License](https://img.shields.io/pypi/l/napari-aideveloper.svg?color=green)](https://github.com/zcqwh/napari-aideveloper/raw/main/LICENSE)\n[![PyPI](https://img.shields.io/pypi/v/napari-aideveloper.svg?color=green)](https://pypi.org/project/napari-aideveloper)\n[![Python Version](https://img.shields.io/pypi/pyversions/napari-aideveloper.svg?color=green)](https://python.org)\n[![tests](https://github.com/zcqwh/napari-aideveloper/workflows/tests/badge.svg)](https://github.com/zcqwh/napari-aideveloper/actions)\n[![codecov](https://codecov.io/gh/zcqwh/napari-aideveloper/branch/main/graph/badge.svg)](https://codecov.io/gh/zcqwh/napari-aideveloper)\n[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-aideveloper)](https://napari-hub.org/plugins/napari-aideveloper)\n\n[napari_aideveloper](https://www.napari-hub.org/plugins/napari-aideveloper) is a napari-plugin derived from [AIDeveloper](https://github.com/maikherbig/AIDeveloper) that allows you to train, evaluate, and apply deep neural nets for image classification within a graphical user-interface (GUI).\n\n\n<!--\nDon't miss the full getting started guide to set up your new package:\nhttps://github.com/napari/cookiecutter-napari-plugin#getting-started\n\nand review the napari docs for plugin developers:\nhttps://napari.org/plugins/index.html\n-->\n\n## Installation\n\nYou can install `napari-aideveloper` via [pip]:\n\n pip install napari-aideveloper\n\n## Introduction\n### Main functions\n* [Build](#build)\n* [History](#history)\n\n****\n\n### Build \n#### 1. Load data\nDrag and drop your data in .rtdc (HDF5) format into the file table and set the class and training/validation.\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/00_Load_data.gif?raw=true)\n\n#### 2. Choose Neural Networks\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/01_choose%20NN.gif?raw=true)\n\n#### 3. Set model storage path\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/02_save_model.gif?raw=true)\n\n#### 4. Start fitting\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/03_start_fitting.gif?raw=true)\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/04_fitting.gif?raw=true)\n\n#### Preview image\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/05_preview.gif?raw=true)\n\n#### Image augmentation\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/main/Tutorial/06_augmentation.gif?raw=true)\n\n****\n\n### History\n#### 1. Load meta data\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/development/Tutorial/GIF/History/01_Load_metadata.gif?raw=true)\n\n#### 2. Check model details\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/development/Tutorial/GIF/History/02_model_detail.gif?raw=true)\n\n#### 3. Rolling median & Linear fit\n![alt Load_data](https://github.com/zcqwh/napari-aideveloper/blob/development/Tutorial/GIF/History/03_rolling_linear.gif?raw=true)\n\n\n\n\n\n\n## Contributing\n\nContributions are very welcome. You can submit your pull request on [GitHub](https://github.com/zcqwh/napari-aideveloper/pulls). Tests can be run with [tox], please ensure the coverage at least stays the same before you submit a pull request.\n\n## License\n\nDistributed under the terms of the [BSD-3] license,\n\"napari-aideveloper\" is free and open source software\n\n## Issues\n\nIf you encounter any problems, please [file an issue](https://github.com/zcqwh/napari-aideveloper/issues) along with a detailed description.\n\n[napari]: https://github.com/napari/napari\n[Cookiecutter]: https://github.com/audreyr/cookiecutter\n[@napari]: https://github.com/napari\n[MIT]: http://opensource.org/licenses/MIT\n[BSD-3]: http://opensource.org/licenses/BSD-3-Clause\n[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt\n[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt\n[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0\n[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt\n[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin\n\n[napari]: https://github.com/napari/napari\n[tox]: https://tox.readthedocs.io/en/latest/\n[pip]: https://pypi.org/project/pip/\n[PyPI]: https://pypi.org/\n\n\n----------------------------------\n\nThis [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.\n",
"description_content_type": "text/markdown",
"keywords": null,
"home_page": "https://github.com/zcqwh/napari-aideveloper",
"download_url": null,
"author": "Chenqi Zhang",
"author_email": "[email protected]",
"maintainer": null,
"maintainer_email": null,
"license": "BSD-3-Clause",
"classifier": [
"Development Status :: 2 - Pre-Alpha",
"Intended Audience :: Developers",
"Framework :: napari",
"Topic :: Software Development :: Testing",
"Programming Language :: Python",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Operating System :: OS Independent",
"License :: OSI Approved :: BSD License"
],
"requires_dist": [
"numpy",
"magicgui",
"qtpy",
"dclab (>=0.39.9)",
"h5py (>=3.6.0)",
"Keras-Applications (>=1.0.8)",
"keras (>=2.8.0)",
"keras-metrics (>=1.1.0)",
"napari-plugin-engine (>=0.2.0)",
"napari (>=0.4.14)",
"onnx (>=1.11.0)",
"opencv-contrib-python-headless (>=4.5.5.62)",
"openpyxl (>=3.0.9)",
"pandas (>=1.4.1)",
"Pillow (>=9.1.1)",
"psutil (>=5.9.0)",
"pyqtgraph (>=0.12.3)",
"pytest (>=7.1.2)",
"scikit-learn (>=1.1.1)",
"scipy (>=1.8.0)",
"setuptools (>=58.0.4)",
"six (>=1.16.0)",
"tensorboard (>=2.8.0)",
"tensorflow (>=2.8.0)",
"tf2onnx (>=1.9.3)",
"xlrd (>=2.0.1)",
"tox ; extra == 'testing'",
"pytest ; extra == 'testing'",
"pytest-cov ; extra == 'testing'",
"pytest-qt ; extra == 'testing'",
"napari ; extra == 'testing'",
"pyqt5 ; extra == 'testing'"
],
"requires_python": ">=3.8",
"requires_external": null,
"project_url": [
"Bug Tracker, https://github.com/zcqwh/napari-aideveloper/issues",
"Documentation, https://github.com/zcqwh/napari-aideveloper#README.md",
"Source Code, https://github.com/zcqwh/napari-aideveloper",
"User Support, https://github.com/zcqwh/napari-aideveloper/issues"
],
"provides_extra": [
"testing"
],
"provides_dist": null,
"obsoletes_dist": null
},
"npe1_shim": false
}