diff --git a/CHANGELOG.md b/CHANGELOG.md index c662217..4c2b697 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,8 +5,12 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). ## [unreleased] + +## [v1.4.4] ### Changed - tensorflow requirement to ~=2.2.2 +### Added +- R10.4 E8.1 consensus models for Guppy version 5.0.15. ## [v1.4.3] ### Fixed diff --git a/medaka/__init__.py b/medaka/__init__.py index 6473a2d..5e624ad 100644 --- a/medaka/__init__.py +++ b/medaka/__init__.py @@ -4,7 +4,7 @@ import os import subprocess -__version__ = "1.4.3" +__version__ = "1.4.4" def check_minimap2_version(): diff --git a/medaka/data/r104_e81_fast_g5015_model.tar.gz b/medaka/data/r104_e81_fast_g5015_model.tar.gz new file mode 100644 index 0000000..a76a47e --- /dev/null +++ b/medaka/data/r104_e81_fast_g5015_model.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:08dc468b6e3381c9a0fb5109168c1edf1413273c12275a480af6cbb733d7b0b8 +size 3372276 diff --git a/medaka/data/r104_e81_hac_g5015_model.tar.gz b/medaka/data/r104_e81_hac_g5015_model.tar.gz new file mode 100644 index 0000000..603da59 --- /dev/null +++ b/medaka/data/r104_e81_hac_g5015_model.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dcf6fc04f8c6fba55e6aed04f648dfeab442963b0ed6e048a48e6bd3dcfd0149 +size 3370262 diff --git a/medaka/data/r104_e81_sup_g5015_model.tar.gz b/medaka/data/r104_e81_sup_g5015_model.tar.gz new file mode 100644 index 0000000..6c51b6c --- /dev/null +++ b/medaka/data/r104_e81_sup_g5015_model.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:10096a379de3c218058060e1b2076c611809d6902b3f89a15880fbcbebe58e19 +size 3373622 diff --git a/medaka/options.py b/medaka/options.py index e675a98..5725477 100755 --- a/medaka/options.py +++ b/medaka/options.py @@ -21,8 +21,8 @@ # r9 consensus 'r941_min_fast_g507', 'r941_min_hac_g507', 'r941_min_sup_g507', 'r941_prom_fast_g507', 'r941_prom_hac_g507', 'r941_prom_sup_g507', - # r10 consensus - 'r103_fast_g507', 'r103_hac_g507', 'r103_sup_g507', + # r104 e81 consensus + 'r104_e81_fast_g5015', 'r104_e81_hac_g5015', 'r104_e81_sup_g5015', # r9 variant calling 'r941_prom_hac_snp_g507', 'r941_prom_hac_variant_g507', ] @@ -35,6 +35,7 @@ # r10 consensus 'r10_min_high_g303', 'r10_min_high_g340', 'r103_min_high_g345', 'r103_min_high_g360', 'r103_prom_high_g360', + 'r103_fast_g507', 'r103_hac_g507', 'r103_sup_g507', # snp and variant - flipflop 'r941_prom_snp_g303', 'r941_prom_variant_g303', 'r941_prom_snp_g322', 'r941_prom_variant_g322',