pylbo.yml

name: pylbo

on:
  push:
    branches: [master, develop]
  pull_request:
    branches: [master, develop]

env:
  CC: /usr/bin/gcc-10
  FC: /usr/bin/gfortran-10
  LEGOLASDIR: /home/runner/work/legolas/legolas

jobs:
  style:
    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v2
      - name: Set up Python 3.9
        uses: actions/setup-python@v1
        with:
          python-version: 3.9

      - name: Install dependencies
        run: |
          python -m pip install --upgrade pip
          pip install flake8 black

      - name: Run flake8
        run: |
          flake8 --count --exclude=__init__.py --extend-ignore=E203,W503 --max-line-length=88 --show-source --statistics post_processing/
          flake8 --count --exclude=__init__.py --extend-ignore=E203,W503 --max-line-length=88 --show-source --statistics tests/pylbo_tests/
          flake8 --count --exclude=__init__.py --extend-ignore=E203,W503 --max-line-length=88 --show-source --statistics tests/regression_tests/

      - name: Run black
        run: |
          black --diff --check post_processing/
          black --diff --check tests/regression_tests/
          black --diff --check tests/pylbo_tests/

  tests:
    runs-on: ubuntu-latest
    needs: style

    steps:
    - uses: actions/checkout@v2
    - name: Set up Python 3.9
      uses: actions/setup-python@v1
      with:
        python-version: 3.9

    - name: Install python dependencies
      run: |
        python -m pip install --upgrade pip
        pip install pytest pytest-cov
        sudo apt-get update
        sudo apt-get install ffmpeg
        cd post_processing
        python setup.py develop

    - name: Install Legolas dependencies
      run: |
        sudo apt-get install libblas-dev
        sudo apt-get install liblapack-dev
        sudo apt-get install lcov
        gfortran-10 --version
        cmake --version

    - name: Compile Legolas
      run: |
        mkdir build
        cd build
        cmake ..
        make -j 2

    - name: Run Pylbo tests
      run: |
        mkdir -p coverage/pylbo
        cd $LEGOLASDIR/tests/pylbo_tests
        cp .coveragerc $LEGOLASDIR/coverage/pylbo
        pytest -v --cov=pylbo
        cd $LEGOLASDIR/coverage/pylbo
        coverage xml

    - name: Upload coverage report
      uses: codecov/codecov-action@v1
      with:
        files: ./coverage/pylbo/coverage.xml
        flags: pylbo