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is it suitable for the very big genome? #186

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AlisaGU opened this issue May 12, 2022 · 0 comments

AlisaGU commented May 12, 2022

Hi,
I have a big genome with 46,139,523,234 bases and 20131 contigs.
Here is the summary of the longest contigs.

ptg000004l      169819904
ptg000441l      158822330
ptg000279l      109104046
ptg000035l      107045360
ptg000669l      100503328
ptg000533l      90735505
ptg000066l      87495606
ptg000800l      85918877
ptg000855l      82319672
ptg000667l      80863498

I want to do pairwise genome alignment for it, and am curious about mummer's ability to handle big genome.

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