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v1dd_coreg.json
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{
"layers": [
{
"source": "graphene://https://api.em.brain.allentech.org/proxy/v1dd/image/aligned_image",
"type": "image",
"blend": "default",
"shader": "#uicontrol float black slider(min=0, max=1, default=0.0)\n#uicontrol float white slider(min=0, max=1, default=1.0)\nfloat rescale(float value) {\n return (value - black) / (white - black);\n}\nvoid main() {\n float val = toNormalized(getDataValue());\n if (val < black) {\n emitRGB(vec3(0,0,0));\n } else if (val > white) {\n emitRGB(vec3(1.0, 1.0, 1.0));\n } else {\n emitGrayscale(rescale(val));\n }\n}\n",
"shaderControls": {
"black": 0.41,
"white": 0.59
},
"name": "img"
},
{
"source": "graphene://https://api.em.brain.allentech.org/segmentation/table/aibs_v1dd",
"type": "segmentation_with_graph",
"selectedAlpha": 0.3,
"segments": [
"864691132444535046"
],
"skeletonRendering": {
"mode2d": "lines_and_points",
"mode3d": "lines"
},
"graphOperationMarker": [
{
"annotations": [],
"tags": []
},
{
"annotations": [],
"tags": []
}
],
"pathFinder": {
"color": "#ffff00",
"pathObject": {
"annotationPath": {
"annotations": [],
"tags": []
},
"hasPath": false
}
},
"name": "seg",
"visible": false
},
{
"type": "annotation",
"annotations": [],
"annotationTags": [],
"voxelSize": [
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],
"bracketShortcutsShowSegmentation": true,
"annotationSelectionShowsSegmentation": true,
"name": "ann"
}
],
"navigation": {
"pose": {
"position": {
"voxelSize": [
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],
"voxelCoordinates": [
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]
},
"orientation": [
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]
},
"zoomFactor": 2119.3889253563084
},
"perspectiveZoom": 2000,
"showSlices": false,
"systemMemoryLimit": 5000000000,
"jsonStateServer": "https://global.em.brain.allentech.org/nglstate/api/v1/post",
"selectedLayer": {
"layer": "img",
"visible": true
},
"layout": "4panel"
}