pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
  xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>
  <groupId>org.openelisglobal</groupId>
  <artifactId>openelisglobal</artifactId>
  <!-- for deployment cycles -->
  <!-- <version>${major.version}.${minor.version}.${fix.version}</version> -->
  <!-- for development cycles -->
  <version>${major.version}.${minor.version}.${state.version}.${fix.version}</version>
  <packaging>war</packaging>
  <properties>
    <maven.java.release>11</maven.java.release>
    <major.version>3</major.version>
    <minor.version>0</minor.version>
    <state.version>3</state.version>
    <!-- 0 = alpha, 1 = beta, 2 = rc, 3 = deployable -->
    <fix.version>2</fix.version>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <liquibase.propertyFile>${project.basedir}/liquibase/liquibase.properties</liquibase.propertyFile>
    <castor.version>1.4.1</castor.version>
    <hapi.version>2.3</hapi.version>
    <hibernate.version>5.6.12.Final</hibernate.version>
    <hibernate-validator.version>6.1.7.Final</hibernate-validator.version>
    <hibernate-search.version>6.1.8.Final</hibernate-search.version>
    <postgresql.version>42.7.0</postgresql.version>
    <log4j.version>2.17.1</log4j.version>
    <springframework.version>5.3.26</springframework.version>
    <springsecurity.version>5.7.10</springsecurity.version>
    <testContainersVersion>1.15.3</testContainersVersion>
  </properties>
  <dependencies>

    <dependency>
      <groupId>commons-codec</groupId>
      <artifactId>commons-codec</artifactId>
      <version>1.15</version>
    </dependency>
    <dependency>
      <groupId>org.jsmpp</groupId>
      <artifactId>jsmpp</artifactId>
      <version>2.3.5</version>
    </dependency>
    <dependency>
      <groupId>org.itech</groupId>
      <artifactId>dataexport-api</artifactId>
      <version>0.0.0.8</version>
    </dependency>
    <dependency>
      <groupId>ca.uhn.hapi.fhir</groupId>
      <artifactId>hapi-fhir-structures-r4</artifactId>
      <version>6.6.2</version>
      <exclusions>
        <exclusion>
          <groupId>xpp3</groupId>
          <artifactId>xpp3</artifactId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>ca.uhn.hapi.fhir</groupId>
      <artifactId>hapi-fhir-client</artifactId>
      <version>6.6.2</version>
    </dependency>
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-databind</artifactId>
      <version>2.13.4.2</version>
    </dependency>
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-core</artifactId>
      <version>2.12.0</version>
    </dependency>
    <dependency>
      <groupId>com.fasterxml.jackson.datatype</groupId>
      <artifactId>jackson-datatype-hibernate5</artifactId>
      <version>2.12.0</version>
    </dependency>
    <dependency>
      <groupId>com.fasterxml.jackson.datatype</groupId>
      <artifactId>jackson-datatype-jdk8</artifactId>
      <version>2.12.0</version>
    </dependency>
    <dependency>
      <groupId>com.fasterxml.jackson.datatype</groupId>
      <artifactId>jackson-datatype-jsr310</artifactId>
      <version>2.12.3</version>
    </dependency>
    <!-- APACHE ASSORTED DEPENDENCIES -->
    <dependency>
      <groupId>org.apache.httpcomponents</groupId>
      <artifactId>httpclient</artifactId>
      <version>4.5.13</version>
    </dependency>
    <dependency>
      <groupId>org.apache.poi</groupId>
      <artifactId>poi</artifactId>
      <version>4.1.1</version>
    </dependency>
    <!-- APACHE COMMONS DEPENDENCIES -->
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-collections4</artifactId>
      <version>4.3</version>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-lang3</artifactId>
      <version>3.9</version>
    </dependency>
    <dependency>
      <groupId>commons-beanutils</groupId>
      <artifactId>commons-beanutils</artifactId>
      <version>1.9.4</version>
    </dependency>
    <dependency>
      <groupId>commons-fileupload</groupId>
      <artifactId>commons-fileupload</artifactId>
      <version>1.5</version>
    </dependency>
    <dependency>
      <groupId>commons-io</groupId>
      <artifactId>commons-io</artifactId>
      <version>2.7</version>
    </dependency>
    <dependency>
      <groupId>commons-logging</groupId>
      <artifactId>commons-logging</artifactId>
      <version>1.2</version>
    </dependency>
    <dependency>
      <groupId>commons-validator</groupId>
      <artifactId>commons-validator</artifactId>
      <version>1.6</version>
    </dependency>
    <!-- CASTOR DEPENDENCIES -->
    <dependency>
      <groupId>org.codehaus.castor</groupId>
      <artifactId>castor-core</artifactId>
      <version>${castor.version}</version>
    </dependency>
    <dependency>
      <groupId>org.codehaus.castor</groupId>
      <artifactId>castor-xml-schema</artifactId>
      <version>${castor.version}</version>
    </dependency>
    <dependency>
      <groupId>org.codehaus.castor</groupId>
      <artifactId>castor-xml</artifactId>
      <version>${castor.version}</version>
    </dependency>
    <!-- HAPI DEPENDENCIES -->
    <dependency>
      <groupId>ca.uhn.hapi</groupId>
      <artifactId>hapi-base</artifactId>
      <version>${hapi.version}</version>
    </dependency>
    <dependency>
      <groupId>ca.uhn.hapi</groupId>
      <artifactId>hapi-hl7overhttp</artifactId>
      <version>${hapi.version}</version>
    </dependency>
    <dependency>
      <groupId>ca.uhn.hapi</groupId>
      <artifactId>hapi-structures-v251</artifactId>
      <version>${hapi.version}</version>
    </dependency>
    <!-- HIBERNATE DEPENDENCIES -->
    <dependency>
      <groupId>org.hibernate.validator</groupId>
      <artifactId>hibernate-validator</artifactId>
      <version>${hibernate-validator.version}</version>
    </dependency>
    <dependency>
      <groupId>org.hibernate</groupId>
      <artifactId>hibernate-core</artifactId>
      <version>${hibernate.version}</version>
    </dependency>
    <dependency>
      <groupId>org.hibernate</groupId>
      <artifactId>hibernate-c3p0</artifactId>
      <version>${hibernate.version}</version>
    </dependency>
    <dependency>
      <groupId>org.hibernate.search</groupId>
      <artifactId>hibernate-search-mapper-orm</artifactId>
      <version>${hibernate-search.version}</version>
    </dependency>
    <dependency>
      <groupId>org.hibernate.search</groupId>
      <artifactId>hibernate-search-backend-lucene</artifactId>
      <version>${hibernate-search.version}</version>
    </dependency>
    <!-- WEB PUSH DEPENDENCIES -->
    <dependency>
      <groupId>nl.martijndwars</groupId>
      <artifactId>web-push</artifactId>
      <version>5.1.1</version>
    </dependency>
    <dependency>
      <groupId>org.bouncycastle</groupId>
      <artifactId>bcpkix-jdk18on</artifactId>
      <version>1.78</version>
  </dependency>
    <!-- JAVAX DEPENDENCIES -->
    <dependency>
      <groupId>javax.annotation</groupId>
      <artifactId>javax.annotation-api</artifactId>
      <version>1.3.2</version>
    </dependency>
    <dependency>
      <groupId>com.sun.mail</groupId>
      <artifactId>javax.mail</artifactId>
      <version>1.6.0</version>
    </dependency>
    <dependency>
      <groupId>javax.servlet</groupId>
      <artifactId>javax.servlet-api</artifactId>
      <version>4.0.1</version>
      <scope>provided</scope>
    </dependency>
    <dependency>
      <groupId>javax.servlet.jsp</groupId>
      <artifactId>javax.servlet.jsp-api</artifactId>
      <version>2.3.3</version>
      <scope>provided</scope>
    </dependency>
    <dependency>
      <groupId>javax.xml.soap</groupId>
      <artifactId>javax.xml.soap-api</artifactId>
      <version>1.4.0</version>
    </dependency>
    <dependency>
      <groupId>javax.validation</groupId>
      <artifactId>validation-api</artifactId>
      <version>2.0.1.Final</version>
    </dependency>
    <dependency>
      <groupId>javax.servlet</groupId>
      <artifactId>jstl</artifactId>
      <version>1.2</version>
    </dependency>
    <dependency>
      <groupId>javax.transaction</groupId>
      <artifactId>jta</artifactId>
      <version>1.1</version>
    </dependency>
    <!-- LIQUIBASE DEPENDENCIES -->
    <dependency>
      <groupId>org.liquibase</groupId>
      <artifactId>liquibase-core</artifactId>
      <version>4.8.0</version>
      <!-- remove logback so our logging continues under log4j2 -->
      <exclusions>
        <exclusion>
          <groupId>ch.qos.logback</groupId>
          <artifactId>logback-classic</artifactId>
        </exclusion>
      </exclusions>
    </dependency>
    <!-- LOG4J DEPENDENCIES -->
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-core</artifactId>
      <version>${log4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-1.2-api</artifactId>
      <version>${log4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-api</artifactId>
      <version>${log4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-jcl</artifactId>
      <version>${log4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-liquibase</artifactId>
      <version>${log4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.apache.logging.log4j</groupId>
      <artifactId>log4j-slf4j-impl</artifactId>
      <version>${log4j.version}</version>
    </dependency>
    <!-- SPRING DEPENDENCIES -->
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-aop</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-context-support</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-core</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-web</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-webmvc</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-tx</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-orm</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-context</artifactId>
      <version>${springframework.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework.retry</groupId>
      <artifactId>spring-retry</artifactId>
      <version>1.2.5.RELEASE</version>
    </dependency>
    <dependency>
      <groupId>org.springframework.security</groupId>
      <artifactId>spring-security-saml2-service-provider</artifactId>
      <version>${springsecurity.version}</version>
      <exclusions>
        <exclusion>
          <groupId>org.bouncycastle</groupId>
          <artifactId>bcprov-jdk15on</artifactId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>org.springframework.security</groupId>
      <artifactId>spring-security-web</artifactId>
      <version>${springsecurity.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework.security</groupId>
      <artifactId>spring-security-core</artifactId>
      <version>${springsecurity.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework.security</groupId>
      <artifactId>spring-security-config</artifactId>
      <version>${springsecurity.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework.security</groupId>
      <artifactId>spring-security-oauth2-client</artifactId>
      <version>${springsecurity.version}</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-test</artifactId>
      <version>${springframework.version}</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.mockito</groupId>
      <artifactId>mockito-core</artifactId>
      <version>2.21.0</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.testcontainers</groupId>
      <artifactId>postgresql</artifactId>
      <version>${testContainersVersion}</version>
      <scope>test</scope>
    </dependency>
    <!-- ASSORTED DEPENDENCIES (Sorted by artifactId) -->
    <dependency>
      <groupId>org.ajaxtags</groupId>
      <artifactId>ajaxtags</artifactId>
      <version>1.2-beta3</version>
    </dependency>
    <dependency>
      <groupId>org.aspectj</groupId>
      <artifactId>aspectjweaver</artifactId>
      <version>1.8.10</version>
    </dependency>
    <dependency>
      <groupId>net.sourceforge.barbecue</groupId>
      <artifactId>barbecue</artifactId>
      <version>1.5-beta1</version>
    </dependency>
    <dependency>
      <groupId>cglib</groupId>
      <artifactId>cglib</artifactId>
      <version>3.2.12</version>
    </dependency>
    <dependency>
      <groupId>com.mchange</groupId>
      <artifactId>c3p0</artifactId>
      <version>0.9.5.4</version>
    </dependency>
    <dependency>
      <groupId>org.owasp.encoder</groupId>
      <artifactId>encoder</artifactId>
      <version>1.2.2</version>
    </dependency>
    <dependency>
      <groupId>com.itextpdf</groupId>
      <artifactId>itextpdf</artifactId>
      <version>5.5.13.3</version>
    </dependency>
    <dependency>
      <groupId>jakarta.xml.ws</groupId>
      <artifactId>jakarta.xml.ws-api</artifactId>
      <version>2.3.3</version>
    </dependency>
    <dependency>
      <groupId>net.sf.jasperreports</groupId>
      <artifactId>jasperreports</artifactId>
      <version>6.15.0</version>
      <exclusions>
        <exclusion>
          <groupId>org.bouncycastle</groupId>
          <artifactId>bcprov-jdk15on</artifactId>
        </exclusion>
      </exclusions>
    </dependency>
    <dependency>
      <groupId>com.sun.activation</groupId>
      <artifactId>javax.activation</artifactId>
      <version>1.2.0</version>
    </dependency>
    <dependency>
      <groupId>javax.mail</groupId>
      <artifactId>javax.mail-api</artifactId>
      <version>1.6.2</version>
    </dependency>
    <dependency>
      <groupId>org.dom4j</groupId>
      <artifactId>dom4j</artifactId>
      <version>2.1.3</version>
    </dependency>
    <dependency>
      <groupId>org.mindrot</groupId>
      <artifactId>jbcrypt</artifactId>
      <version>0.4</version>
    </dependency>
    <dependency>
      <groupId>org.jfree</groupId>
      <artifactId>jcommon</artifactId>
      <version>1.0.24</version>
    </dependency>
    <dependency>
      <groupId>org.jfree</groupId>
      <artifactId>jfreechart</artifactId>
      <version>1.5.0</version>
    </dependency>
    <dependency>
      <groupId>com.googlecode.json-simple</groupId>
      <artifactId>json-simple</artifactId>
      <version>1.1.1</version>
    </dependency>
    <dependency>
      <groupId>org.json</groupId>
      <artifactId>json</artifactId>
      <version>20230618</version>
    </dependency>
    <dependency>
      <groupId>org.jsoup</groupId>
      <artifactId>jsoup</artifactId>
      <version>1.15.3</version>
    </dependency>
    <dependency>
      <groupId>junit</groupId>
      <artifactId>junit</artifactId>
      <version>4.13.1</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.postgresql</groupId>
      <artifactId>postgresql</artifactId>
      <version>${postgresql.version}</version>
    </dependency>
    <dependency>
      <groupId>org.quartz-scheduler</groupId>
      <artifactId>quartz</artifactId>
      <version>2.3.2</version>
    </dependency>
    <dependency>
      <groupId>org.jasypt</groupId>
      <artifactId>jasypt</artifactId>
      <version>1.9.3</version>
    </dependency>
    <dependency>
      <groupId>com.sun.xml.messaging.saaj</groupId>
      <artifactId>saaj-impl</artifactId>
      <version>1.4.0</version>
    </dependency>
    <dependency>
      <groupId>com.ibm.icu</groupId>
      <artifactId>icu4j</artifactId>
      <version>71.1</version>
    </dependency>
    <!-- this fixes running test containers on the apple silicon mac -->
    <!-- see https://github.com/testcontainers/testcontainers-java/issues/3834 -->
    <dependency>
      <groupId>net.java.dev.jna</groupId>
      <artifactId>jna</artifactId>
      <version>5.7.0</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>com.opencsv</groupId>
      <artifactId>opencsv</artifactId>
      <version>5.7.1</version>
    </dependency>
    <dependency>
      <groupId>org.projectlombok</groupId>
      <artifactId>lombok</artifactId>
      <version>1.18.30</version>
      <scope>provided</scope>
    </dependency>
  </dependencies>
  <repositories>
    <repository>
      <id>jaspersoft-third-party</id>
      <url>https://jaspersoft.jfrog.io/jaspersoft/third-party-ce-artifacts/</url>
    </repository>
  </repositories>
  <build>
    <finalName>OpenELIS-Global</finalName>
    <resources>
      <resource>
        <filtering>true</filtering>
        <directory>src/main/filtered-resources</directory>
      </resource>
      <resource>
        <directory>src/main/resources</directory>
      </resource>
    </resources>
    <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-war-plugin</artifactId>
        <version>3.3.1</version>
      </plugin>
      <plugin>
        <artifactId>maven-compiler-plugin</artifactId>
        <version>3.8.1</version>
        <configuration>
          <!-- move to release when we compile in java versions >= 9 -->
          <release>${maven.java.release}</release>
          <!-- legacy for java versions < 9 -->
          <!-- <source>${maven.compiler.source}</source> -->
          <!-- <target>${maven.compiler.target}</target> -->
        </configuration>
      </plugin>
      <plugin>
        <groupId>com.spotify</groupId>
        <artifactId>dockerfile-maven-plugin</artifactId>
        <version>1.4.9</version>
        <configuration>
          <repository>${project.artifactId}</repository>
        </configuration>
        <executions>
          <execution>
            <id>tag-latest</id>
            <goals>
              <goal>build</goal>
              <goal>tag</goal>
              <goal>push</goal>
            </goals>
            <phase>deploy</phase>
            <configuration>
              <tag>latest</tag>
            </configuration>
          </execution>
          <execution>
            <id>tag-version</id>
            <goals>
              <goal>build</goal>
              <goal>tag</goal>
              <goal>push</goal>
            </goals>
            <phase>deploy</phase>
            <configuration>
              <tag>${project.version}</tag>
            </configuration>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-help-plugin</artifactId>
        <version>3.2.0</version>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-surefire-plugin</artifactId>
        <version>2.18.1</version>
      </plugin>
      <!-- Code formatter -->
      <plugin>
        <groupId>com.diffplug.spotless</groupId>
        <artifactId>spotless-maven-plugin</artifactId>
        <version>2.43.0</version>
        <configuration>
          <pom>
            <sortPom>
              <expandEmptyElements>false</expandEmptyElements>
            </sortPom>
            <trimTrailingWhitespace />
            <endWithNewline />
            <indent>
              <spaces>true</spaces>
            </indent>
          </pom>
          <formats>
            <!-- you can define as many formats as you want, each is independent -->
            <format>
              <!-- define the files to apply to -->
              <includes>
                <include>**/*.sh</include>
                <include>**/*.xml</include>
                <include>.gitignore</include>
              </includes>
              <!-- ignore build files -->
              <excludes>
                <exclude>.idea/**</exclude>
                <exclude>frontend/**</exclude>
                <exclude>.settings/**</exclude>
                <exclude>**/target/**</exclude>
                <exclude>bin/**</exclude>
                <exclude>tmp/**</exclude>
                <exclude>tools/Liquibase-Outdated/**</exclude>
                <exclude>dataexport/**</exclude>
                <exclude>plugins/**</exclude>
              </excludes>
              <trimTrailingWhitespace />
              <endWithNewline />
              <indent>
                <spaces>true</spaces>
              </indent>
            </format>
            <format>
              <includes>
                <include>**/*.md</include>
              </includes>
              <excludes>
                <exclude>**/target/**</exclude>
                <exclude>tools/Liquibase-Outdated/**</exclude>
                <exclude>dataexport/**</exclude>
                <exclude>plugins/**</exclude>
              </excludes>
              <prettier>
                <!-- Formatter that Spotless supports and can format Markdown:
                       https://github.com/diffplug/spotless/tree/main/plugin-maven#prettier
                     Only Spotless-supported formatter that can be configured to
                     force line wrap -->
                <config>
                  <proseWrap>always</proseWrap>
                </config>
              </prettier>
            </format>
          </formats>
          <!-- define a language-specific format -->
          <java>
            <importOrder />
            <!-- standard import order -->

            <removeUnusedImports />

            <eclipse>
              <version>4.26</version>
              <file>${project.basedir}/tools/OpenELIS_java_formatter.xml</file>
            </eclipse>
          </java>
        </configuration>
      </plugin>
    </plugins>
  </build>
</project>