From 4156066afb8151058bcef9fc3a3a1e972f5d3a51 Mon Sep 17 00:00:00 2001 From: Joe Flack Date: Thu, 21 Nov 2024 19:04:55 -0500 Subject: [PATCH] Bug fix: Synonym sync tests (#705) - Update: Needed to change a file name --- tests/test_sync_synonym.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/test_sync_synonym.py b/tests/test_sync_synonym.py index ca4ab0e1..3939c328 100644 --- a/tests/test_sync_synonym.py +++ b/tests/test_sync_synonym.py @@ -53,7 +53,7 @@ INPUT_SOURCE_DB = IN_DIR / 'test_omim.db' # create via: sh run.sh make ../../tests/input/sync_synonym/test_omim.db INPUT_MONDO_SYNONYMS = IN_DIR / 'mondo-synonyms-scope-type-xref.tsv' # create via: sh run.sh make ../../tests/input/sync_synonym/mondo-synonyms-scope-type-xref.tsv INPUT_ONTO_SYNONYMS = IN_DIR / 'omim-synonyms-scope-type-xref.tsv' # create via: sh run.sh make ../../tests/input/sync_synonym/omim-synonyms-scope-type-xref.tsv -INPUT_EXCLUDED_SYNONYMS = CONFIG_DIR / 'mondo-excluded-values.yml' +INPUT_EXCLUDED_SYNONYMS = CONFIG_DIR / 'mondo-exclusion-configs.yml' INPUT_MAPPINGS = IN_DIR / 'test_mondo.sssom.tsv' INPUT_SOURCE_METADATA = META_DIR / 'omim.yml' OUTPUT_ADDED = OUT_DIR / 'omim.synonyms.added.robot.tsv'