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mkdocs.yml
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mkdocs.yml
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site_name: Model Insertion Checker (MIC)
nav:
- Home: index.md
- Installation: installation.md
- MIC Overview: overview.md
- 'Instructions':
- 'Setting up Docker': 'model_configuration/01-DockerGitHub.md'
- 'Preparing your executable': 'model_configuration/02-Preparing your executable.md'
- 'Using the command line':
- 'Option 1: Parameters values passed through command line':
- '1. Starting a new component': 'model_configuration/03a-step1.md'
- '2. Tracing execution': 'model_configuration/04a-step2.md'
- '3. Exposing parameters': 'model_configuration/05a-step3.md'
- '4. Editing component configuration files [skipped]': 'model_configuration/06a-step4.md'
- '5. Exposing input files': 'model_configuration/07a-step5.md'
- '6. Exposing outputs': 'model_configuration/08a-step6.md'
- '7. Wrapping execution': 'model_configuration/09a-step7.md'
- '8. Testing run': 'model_configuration/10a-step8.md'
- '9. Uploading to GitHub, DockerHub and MINT ': 'model_configuration/11a-step9.md'
- 'Summarized example ': 'model_configuration/12a-end-to-end-example.md'
- 'Option 2: Parameters values passed through config files':
- '1. Starting a new component': 'model_configuration/03b-step1.md'
- '2. Tracing execution': 'model_configuration/04b-step2.md'
- '3. Exposing parameters': 'model_configuration/05b-step3.md'
- '4. Editing component configuration files': 'model_configuration/06b-step4.md'
- '5. Exposing input files': 'model_configuration/07b-step5.md'
- '6. Exposing outputs': 'model_configuration/08b-step6.md'
- '7. Wrapping execution': 'model_configuration/09b-step7.md'
- '8. Testing run': 'model_configuration/10b-step8.md'
- '9. Uploading to GitHub, DockerHub and MINT ': 'model_configuration/11a-step9.md'
- 'Summarized example ': 'model_configuration/12b-end-to-end-example.md'
- 'Creating a software component from a Jupyter Notebook':
- 'Overview': 'notebooks/index.md'
- 'Preparing a Binder repository': 'notebooks/prepare_binder.md'
- 'Exposing software inputs and outputs': 'notebooks/expose_inputs_outputs.md'
- 'Converting the repository to a software component': 'notebooks/convert_repository.md'
- 'Testing run': 'notebooks/run_component.md'
- 'Uploading to DockerHub and MINT': 'notebooks/upload_component.md'
- Credentials: 'commands/configure.md'
- Available commands: usage.md
- FAQ: faq.md
- Glossary: glossary.md
theme:
name: material
logo: 'logo.png'
markdown_extensions:
- admonition
- pymdownx.superfences:
# make exceptions to highlighting of code
- toc:
permalink: true
extra:
version:
provider: mike