Apply pycodestyles autofixes

pyproject.toml

@@ -27,8 +27,36 @@ line-length = 130
 target-version = "py39"
 
 [tool.ruff.lint]
-select = [
+extend-select = [
+    "FA", # flake8-future-annotations
     "I", # isort
+    "W", # pycodestyle Warning
+]
+ignore= [
+    ###
+    # Rules we don't want or don't agree with
+    ###
+    # Used for direct, non-subclass type comparison, for example: `type(val) is str`
+    # see https://github.com/astral-sh/ruff/issues/6465
+    "E721", # Do not compare types, use `isinstance()`
+
+    # TODO: Investigate and fix or configure
+    "E402",
+    "E722",
+    "E743",
+    "F811",
+    "F822",
+    "F841",
+    "F842",
+]
+[tool.ruff.lint.per-file-ignores]
+"*.pyi" = [
+    # Rules that are out of the control of stub authors:
+    "E741", # ambiguous variable name
+    "F403", # `from . import *` used; unable to detect undefined names
+    # Stubs can sometimes re-export entire modules.
+    # Issues with using a star-imported name will be caught by type-checkers.
+    "F405", # may be undefined, or defined from star imports
 ]
 
 [tool.ruff.lint.isort]

stubs/matplotlib/__init__.pyi

@@ -1,10 +1,7 @@
 import contextlib
 from typing import Generator, Literal
 
-import numpy as np
-from packaging.version import parse as parse_version
-
-from . import _docstring, _version, cbook, colors as colors, rcsetup
+from . import colors as colors
 from ._typing import *
 
 class __getattr__:

stubs/matplotlib/_afm.pyi

@@ -1,4 +1,3 @@
-import numpy as np
 
 from ._typing import *
 

stubs/matplotlib/_api/__init__.pyi

@@ -1,5 +1,5 @@
 import functools
-from typing import Any, Callable, Generator, Iterable, Type
+from typing import Callable, Generator, Iterable, Type
 
 from .deprecation import MatplotlibDeprecationWarning
 

stubs/matplotlib/_mathtext.pyi

@@ -1,6 +1,5 @@
 import enum
 import functools
-from sre_parse import State
 from tkinter.tix import HList
 from typing import Literal
 

stubs/matplotlib/_pylab_helpers.pyi

@@ -1,4 +1,4 @@
-from typing import Any, List, OrderedDict
+from typing import OrderedDict
 
 from .backend_bases import FigureManagerBase
 from .figure import Figure

stubs/matplotlib/animation.pyi

@@ -1,9 +1,7 @@
 import abc
 import contextlib
 from itertools import count
-from typing import Callable, Generator, Iterable, Iterator, List
-
-from matplotlib.backend_bases import NonGuiException
+from typing import Callable, Generator, Iterable, Iterator
 
 from .figure import Figure
 

stubs/matplotlib/axes/_axes.pyi

@@ -1,5 +1,4 @@
 import datetime
-from re import L
 from typing import Callable, Literal, Sequence, overload
 
 import matplotlib.tri as mtri

stubs/matplotlib/axes/_secondary_axes.pyi

@@ -1,6 +1,5 @@
 from typing import Callable, Literal
 
-import numpy as np
 from matplotlib._typing import *
 from matplotlib.axes._base import _AxesBase
 from matplotlib.transforms import Transform

stubs/matplotlib/axis.pyi

@@ -1,5 +1,4 @@
 import datetime
-from datetime import timezone
 from typing import Any, Callable, Literal, Type
 
 import numpy as np

stubs/matplotlib/backends/backend_agg.pyi

@@ -1,6 +1,6 @@
 import threading
 from io import BufferedWriter, BytesIO
-from typing import Any, Tuple
+from typing import Any
 
 import numpy as np
 from matplotlib._typing import *

stubs/matplotlib/backends/backend_pdf.pyi

@@ -1,7 +1,7 @@
 from enum import Enum
 from functools import total_ordering
 from io import BytesIO
-from typing import Any, Callable, Optional, Set
+from typing import Any, Optional, Set
 
 import numpy as np
 from matplotlib._enums import CapStyle, JoinStyle

stubs/matplotlib/backends/backend_pgf.pyi

@@ -1,7 +1,5 @@
 from typing import Any, Callable
 
-import numpy as np
-from matplotlib import _api
 from matplotlib._typing import *
 from matplotlib.backend_bases import FigureCanvasBase, FigureManagerBase, GraphicsContextBase, RendererBase, _Backend
 from matplotlib.figure import Figure

stubs/matplotlib/category.pyi

@@ -1,4 +1,4 @@
-from typing import Any, Iterable
+from typing import Iterable
 
 import numpy as np
 

stubs/matplotlib/collections.pyi

@@ -1,4 +1,3 @@
-from tkinter.messagebox import NO
 from typing import Callable, Literal, Sequence
 
 import numpy as np

stubs/matplotlib/figure.pyi

@@ -5,7 +5,7 @@ import numpy as np
 from mpl_toolkits.mplot3d import Axes3D
 
 from ._typing import *
-from .artist import Artist, _finalize_rasterization, allow_rasterization
+from .artist import Artist, allow_rasterization
 from .axes import Axes
 from .backend_bases import FigureCanvasBase, MouseButton, MouseEvent, RendererBase
 from .colorbar import Colorbar

stubs/matplotlib/offsetbox.pyi

@@ -1,4 +1,4 @@
-from typing import Any, Callable, Literal, Sequence
+from typing import Callable, Literal, Sequence
 
 from ._typing import *
 from .artist import Artist

stubs/matplotlib/pyplot.pyi

@@ -1,18 +1,14 @@
 import datetime
-from array import array
 from typing import Callable, ContextManager, Literal, Sequence, overload
 
-import matplotlib
-import matplotlib.image
 import numpy as np
 from matplotlib import rcParams as rcParams, style as style
 from matplotlib.contour import QuadContourSet
 
-from . import rcParams
 from ._typing import *
 from .artist import Artist
 from .axes import Axes as Axes
-from .backend_bases import FigureCanvasBase, FigureManagerBase, MouseButton, _Backend
+from .backend_bases import FigureManagerBase, MouseButton, _Backend
 from .collections import BrokenBarHCollection, Collection, LineCollection, PathCollection, PolyCollection, QuadMesh
 from .colors import Colormap, Normalize
 from .container import BarContainer, ErrorbarContainer, StemContainer
@@ -23,7 +19,6 @@ from .lines import Line2D
 from .markers import MarkerStyle
 from .patches import FancyArrow, Polygon
 from .quiver import Quiver
-from .rcsetup import interactive_bk as _interactive_bk
 from .scale import ScaleBase
 from .streamplot import StreamplotSet
 from .table import Table

stubs/matplotlib/quiver.pyi

@@ -3,7 +3,7 @@ from typing import Literal
 from ._typing import *
 from .artist import Artist, allow_rasterization
 from .axes import Axes
-from .backend_bases import Event, MouseEvent, RendererBase
+from .backend_bases import MouseEvent, RendererBase
 from .collections import PolyCollection
 from .figure import Figure
 

stubs/matplotlib/scale.pyi

@@ -1,4 +1,4 @@
-from typing import Any, Callable, Literal, Sequence
+from typing import Callable, Literal, Sequence
 
 from ._typing import *
 from .axis import Axis

stubs/matplotlib/spines.pyi

@@ -6,7 +6,7 @@ from typing import Sequence
 from ._typing import *
 from .artist import allow_rasterization
 from .axes import Axes
-from .axis import Axis, XAxis, YAxis
+from .axis import Axis
 from .backend_bases import RendererBase
 from .patches import Patch
 from .path import Path

stubs/matplotlib/ticker.pyi

@@ -1,5 +1,5 @@
 from functools import partial
-from typing import Any, Callable, Literal, Sequence
+from typing import Callable, Literal, Sequence
 
 from ._typing import *
 from .axis import Axis

stubs/matplotlib/widgets.pyi

@@ -1,26 +1,19 @@
-import copy
-from contextlib import ExitStack
-from numbers import Integral, Number
-from typing import Any, Callable, Dict, List, Literal, Mapping, Optional, Sequence, Tuple, Union
+from typing import Callable, Literal, Mapping, Sequence
 
-import matplotlib as mpl
 import numpy as np
 from matplotlib.axes._axes import Axes
 from matplotlib.backend_bases import DrawEvent, Event, FigureCanvasBase, KeyEvent, MouseButton, MouseEvent
 from matplotlib.figure import Figure
 from matplotlib.lines import Line2D
-from matplotlib.patches import Ellipse, Rectangle
-from matplotlib.transforms import Affine2D
-from numpy import float64, ndarray
+from numpy import ndarray
 from numpy.typing import ArrayLike
 from PIL.Image import Image
 
 from ._typing import Color
 from .artist import Artist
 from .lines import Line2D
-from .patches import Circle, Ellipse, Polygon, Rectangle
+from .patches import Circle
 from .text import Text
-from .transforms import Affine2D, TransformedPatchPath
 
 class LockDraw:
     def __init__(self) -> None: ...

stubs/networkx/__init__.pyi

@@ -63,4 +63,3 @@ from .generators import *
 from .linalg import *
 from .readwrite import *
 from .relabel import convert_node_labels_to_integers as convert_node_labels_to_integers, relabel_nodes as relabel_nodes
-from .testing.test import run as test

stubs/networkx/algorithms/approximation/clique.pyi

@@ -1,5 +1,4 @@
 from ...classes.graph import Graph
-from ...utils import not_implemented_for
 
 __all__ = [
     "clique_removal",

stubs/networkx/algorithms/approximation/clustering_coefficient.pyi

@@ -1,5 +1,5 @@
 from ...classes.graph import Graph
-from ...utils import not_implemented_for, py_random_state
+from ...utils import py_random_state
 
 __all__ = ["average_clustering"]
 

stubs/networkx/algorithms/approximation/connectivity.pyi

@@ -1,5 +1,3 @@
-import itertools
-from operator import itemgetter
 from typing import Mapping
 
 from ...classes.graph import Graph

stubs/networkx/algorithms/approximation/dominating_set.pyi

@@ -1,6 +1,4 @@
 from ...classes.graph import Graph
-from ...utils import not_implemented_for
-from ..matching import maximal_matching
 
 __all__ = ["min_weighted_dominating_set", "min_edge_dominating_set"]
 

stubs/networkx/algorithms/approximation/kcomponents.pyi

@@ -1,13 +1,8 @@
-import itertools
-from collections import defaultdict
 from collections.abc import Mapping
 from functools import cached_property
 from typing import Mapping
 
 from ...classes.graph import Graph
-from ...exception import NetworkXError
-from ...utils import not_implemented_for
-from . import local_node_connectivity
 
 __all__ = ["k_components"]
 

stubs/networkx/algorithms/approximation/maxcut.pyi

@@ -2,7 +2,7 @@ from typing import Any
 
 from ..._typing import Scalar
 from ...classes.graph import Graph
-from ...utils.decorators import not_implemented_for, py_random_state
+from ...utils.decorators import py_random_state
 
 __all__ = ["randomized_partitioning", "one_exchange"]
 

stubs/networkx/algorithms/approximation/ramsey.pyi

@@ -1,5 +1,4 @@
 from ...classes.graph import Graph
-from ...utils import arbitrary_element, not_implemented_for
 
 __all__ = ["ramsey_R2"]
 

stubs/networkx/algorithms/approximation/steinertree.pyi

@@ -1,9 +1,7 @@
-from itertools import chain
 
 from numpy.typing import ArrayLike
 
 from ...classes.graph import Graph
-from ...utils import not_implemented_for, pairwise
 
 __all__ = ["metric_closure", "steiner_tree"]
 

stubs/networkx/algorithms/approximation/traveling_salesman.pyi

@@ -1,11 +1,9 @@
-import math
 from typing import Literal, Mapping
 
 from numpy.typing import ArrayLike
 
-from ...algorithms.tree.mst import random_spanning_tree
 from ...classes.graph import Graph
-from ...utils import not_implemented_for, pairwise, py_random_state
+from ...utils import py_random_state
 
 __all__ = [
     "traveling_salesman_problem",

stubs/networkx/algorithms/approximation/treewidth.pyi

@@ -1,9 +1,5 @@
-import itertools
-import sys
-from heapq import heapify, heappop, heappush
 
 from ...classes.graph import Graph
-from ...utils import not_implemented_for
 
 __all__ = ["treewidth_min_degree", "treewidth_min_fill_in"]
 

stubs/networkx/algorithms/assortativity/connectivity.pyi

@@ -1,4 +1,3 @@
-from collections import defaultdict
 from typing import Literal, Mapping
 
 from ...classes.graph import Graph

stubs/networkx/algorithms/assortativity/correlation.pyi

@@ -1,6 +1,4 @@
 from ...classes.graph import Graph
-from .mixing import attribute_mixing_matrix, degree_mixing_matrix
-from .pairs import node_degree_xy
 
 __all__ = [
     "degree_pearson_correlation_coefficient",

stubs/networkx/algorithms/assortativity/mixing.pyi

@@ -1,8 +1,6 @@
 from typing import Mapping
 
 from ...classes.graph import Graph
-from ...utils import dict_to_numpy_array
-from .pairs import node_attribute_xy, node_degree_xy
 
 __all__ = [
     "attribute_mixing_matrix",

stubs/networkx/algorithms/asteroidal.pyi

@@ -1,7 +1,6 @@
 from typing import Mapping
 
 from ..classes.graph import Graph
-from ..utils import not_implemented_for
 
 __all__ = ["is_at_free", "find_asteroidal_triple"]
 

stubs/networkx/algorithms/bipartite/basic.pyi

@@ -1,8 +1,6 @@
 from typing import Mapping
 
-from ...algorithms.components import connected_components
 from ...classes.graph import Graph
-from ...exception import AmbiguousSolution
 
 __all__ = [
     "is_bipartite",

stubs/networkx/algorithms/bipartite/cluster.pyi

@@ -1,4 +1,3 @@
-import itertools
 from collections.abc import Iterable
 from typing import Mapping
 

stubs/networkx/algorithms/bipartite/covering.pyi

@@ -1,7 +1,4 @@
-from ...algorithms.covering import min_edge_cover as _min_edge_cover
 from ...classes.graph import Graph
-from ...utils import not_implemented_for
-from .matching import hopcroft_karp_matching
 
 __all__ = ["min_edge_cover"]
 

stubs/networkx/algorithms/bipartite/edgelist.pyi

@@ -4,7 +4,6 @@ from ...classes.graph import Graph
 
 __all__ = ["generate_edgelist", "write_edgelist", "parse_edgelist", "read_edgelist"]
 
-from ...utils import not_implemented_for, open_file
 
 def write_edgelist(
     G: Graph,