Merge pull request #424 from microbiomedata/423-incorrect-urls-for-data-objects

mbthornton-lbl · web-flow · commit 150b8d6ef51e · 2025-03-10T16:56:57.000-07:00
Fix URL generation in run_import.py
diff --git a/nmdc_automation/run_process/run_import.py b/nmdc_automation/run_process/run_import.py
@@ -207,7 +207,7 @@ def import_projects(ctx,  import_file, import_yaml, site_configuration, update_d
                     "md5_checksum": md5,
                     "data_object_type": mapping.data_object_type,
                     "was_generated_by": mapping.nmdc_process_id,
-                    "url": f"{import_mapper.data_source_url}/{import_mapper.data_generation_id}/{export_file}",
+                    "url": f"{import_mapper.data_source_url}/{import_mapper.data_generation_id}/{nmdc_process_id}/{nmdc_data_file_name}",
                     "description": description
                 }
                 # Add to the import_db if it doesn't already exist

Original file line number	Diff line number	Diff line change
`@@ -207,7 +207,7 @@ def import_projects(ctx, import_file, import_yaml, site_configuration, update_d`
`207`	`207`	`"md5_checksum": md5,`
`208`	`208`	`"data_object_type": mapping.data_object_type,`
`209`	`209`	`"was_generated_by": mapping.nmdc_process_id,`
`210`		`- "url": f"{import_mapper.data_source_url}/{import_mapper.data_generation_id}/{export_file}",`
	`210`	`+ "url": f"{import_mapper.data_source_url}/{import_mapper.data_generation_id}/{nmdc_process_id}/{nmdc_data_file_name}",`
`211`	`211`	`"description": description`
`212`	`212`	`}`
`213`	`213`	`# Add to the import_db if it doesn't already exist`