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Issues list

Try to recapitulate Simon's SRA wishlist from BigQuery alone
#68 opened Feb 7, 2025 by turbomam updated Feb 11, 2025
run lexmatch agaisnt nmdc-schema and push SSSOM output to repo
#69 opened Feb 7, 2025 by turbomam updated Feb 7, 2025
strategy for keeping Biosample DuckDB up to date
#64 opened Feb 7, 2025 by turbomam updated Feb 7, 2025
index more fields in supplementary MongoDB
#62 opened Feb 7, 2025 by turbomam updated Feb 7, 2025
review dependencies and update documentation
#42 opened Jan 8, 2025 by turbomam updated Jan 8, 2025
see followup actions from PR #32
#40 opened Jan 8, 2025 by turbomam updated Jan 8, 2025
infer Biosample's env_package
#22 opened Sep 3, 2024 by turbomam updated Sep 10, 2024
some scripts still access the Biosample PostgreSQL database
#25 opened Sep 4, 2024 by turbomam updated Sep 4, 2024
review anthropogenic classes in env_local_scale for soil
#12 opened Aug 30, 2024 by turbomam updated Sep 3, 2024
review on proposed subsetting for soil env_local_scale terms
#14 opened Aug 30, 2024 by aclum updated Aug 30, 2024
6 tasks
how many terms to display in the submission portal per env context term
#15 opened Aug 30, 2024 by aclum updated Aug 30, 2024
remove semantically similar classes from candidate lists
#11 opened Aug 30, 2024 by turbomam updated Aug 30, 2024
Add user guide to README.md documentation Improvements or additions to documentation
#2 opened Aug 21, 2024 by eecavanna updated Aug 21, 2024
ProTip! What’s not been updated in a month: updated:<2025-01-17.