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run-calib.qsub
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run-calib.qsub
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#!/bin/tcsh
#PBS -q main
#PBS -N pipeline-calib
#PBS -l nodes=1:ppn=8
#PBS -l walltime=6:00:00
#PBS -k oe
#PBS -l file=2gb
echo ------------------------------------------------------
echo -n 'Job is running on node '; cat $PBS_NODEFILE
echo ------------------------------------------------------
echo PBS: qsub is running on $PBS_O_HOST
echo PBS: originating queue is $PBS_O_QUEUE
echo PBS: executing queue is $PBS_QUEUE
echo PBS: job identifier is $PBS_JOBID
echo PBS: job name is $PBS_JOBNAME
echo PBS: ARRAYID = $PBS_ARRAYID
echo ------------------------------------------------------
module load casa
module load lofar
source /soft/lofar-070915/lofarinit.csh
setenv PATH /home/mjh/lofar/bin:$PATH
setenv PYTHONPATH /soft/pyrap-new:$PYTHONPATH
setenv LD_LIBRARY_PATH /soft/boost/lib:/soft/casacore-1.7.0/lib:$LD_LIBRARY_PATH
/home/mjh/lofar/surveys-pipeline/calib.py $CONFIG $PBS_ARRAYID