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Update predict_writer for iohub> 0.2.0 #173

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edyoshikun opened this issue Sep 25, 2024 · 0 comments · Fixed by #189
Closed

Update predict_writer for iohub> 0.2.0 #173

edyoshikun opened this issue Sep 25, 2024 · 0 comments · Fixed by #189
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maintenance Maintenance work translation Image translation (VS)
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@edyoshikun
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Update viscy's predict pad to be conformant to new iohub versions where _pad_shape is imported from iohub.ngff.nodes
rather than the previous implementation.

This is a private method, so I think it's better to fix it on the viscy side rather than on iohub

from iohub.ngff import ImageArray, Plate, Position, _pad_shape, open_ome_zarr

@ziw-liu ziw-liu added maintenance Maintenance work translation Image translation (VS) labels Sep 27, 2024
@ziw-liu ziw-liu added this to the v0.3.0 milestone Sep 27, 2024
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