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Imaging Mass Cytometry data is being generated by grants supported by the MC2 Center. Recent interactions with a community member are likely to result in the submission of this data to Synapse. To support storage and sharing of IMC data, we should do the following (not necessarily exhaustive or in order):
identify existing models and storage strategies for IMC data
refine models and storage strategies to align with existing MC2 models and approaches
implement model and storage strategies
work with contributors to test model and storage strategies on data
record information on model, storage strategy, annotation workflow, etc. in an SOP document
determine if there is a CRDC node that will take this data or if Synapse should be considered the destination repo
Imaging Mass Cytometry data is being generated by grants supported by the MC2 Center. Recent interactions with a community member are likely to result in the submission of this data to Synapse. To support storage and sharing of IMC data, we should do the following (not necessarily exhaustive or in order):
Initial work on the steps above can be found in this folder, IMC_model_development
This ticket will be updated with timelines once more information has been received from the potential contributor.
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