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Implement metadata model/data storage strategy for Imaging Mass Cytometry #73

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Bankso opened this issue Feb 16, 2024 · 0 comments
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effort-high feature New feature or request

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Bankso commented Feb 16, 2024

Imaging Mass Cytometry data is being generated by grants supported by the MC2 Center. Recent interactions with a community member are likely to result in the submission of this data to Synapse. To support storage and sharing of IMC data, we should do the following (not necessarily exhaustive or in order):

  • identify existing models and storage strategies for IMC data
  • refine models and storage strategies to align with existing MC2 models and approaches
  • implement model and storage strategies
  • work with contributors to test model and storage strategies on data
  • record information on model, storage strategy, annotation workflow, etc. in an SOP document
  • determine if there is a CRDC node that will take this data or if Synapse should be considered the destination repo

Initial work on the steps above can be found in this folder, IMC_model_development

This ticket will be updated with timelines once more information has been received from the potential contributor.

@Bankso Bankso self-assigned this Feb 16, 2024
@Bankso Bankso added the feature New feature or request label Feb 16, 2024
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