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plotting_utils.py
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plotting_utils.py
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# jax
import time
from functools import partial
import ipdb
import jax
import jax.numpy as np
# import tk as tkinter
# import matplotlib
# matplotlib.use('Qt5Agg')
import matplotlib.pyplot as pl
# other, trivial stuff
import numpy as onp
cmap = 'viridis'
import pontryagin_utils
from misc import *
def plot_sol(sol, problem_params):
# adapted from plot_forward_backward in ddp_optimizer
# this works regardless of v/t reparameterisation.
# all the x axes are physical times as stored in sol.ys['t']
# all interpolations are done with ODE solver "t", so whatever independent
# variable we happen to have
interp_ts = np.linspace(sol.t0, sol.t1, 5001)
# plot the state trajectory of the forward pass, interpolation & nodes.
ax1 = pl.subplot(221)
pl.plot(sol.ys['t'], sol.ys['x'], marker='.', linestyle='', alpha=1)
# pl.plot(sol.ys['t'], sol.ys['v'], marker='.', linestyle='', alpha=1)
interp_ys = jax.vmap(sol.evaluate)(interp_ts)
pl.gca().set_prop_cycle(None)
pl.plot(interp_ys['t'], interp_ys['x'], alpha=0.5, label=problem_params['state_names'])
# pl.plot(interp_ys['t'], interp_ys['v'], alpha=0.5, label='v(x(t))')
pl.legend()
pl.subplot(222, sharex=ax1)
us = jax.vmap(pontryagin_utils.u_star_2d, in_axes=(0, 0, None))(
sol.ys['x'], sol.ys['vx'], problem_params
)
def u_t(t):
state_t = sol.evaluate(t)
return pontryagin_utils.u_star_2d(state_t['x'], state_t['vx'], problem_params)
us_interp = jax.vmap(u_t)(interp_ts)
pl.plot(sol.ys['t'], us, linestyle='', marker='.')
pl.gca().set_prop_cycle(None)
pl.plot(interp_ys['t'], us_interp, label=('u_0', 'u_1'))
pl.legend()
if 'vxx' not in sol.ys:
# from here on we only plot hessian related stuff
# so if that was not calculated, exit.
return
# plot the eigenvalues of S from the backward pass.
pl.subplot(223, sharex=ax1)
# eigenvalues at nodes.
sorted_eigs = lambda S: np.sort(np.linalg.eig(S)[0].real)
S_eigenvalues = jax.vmap(sorted_eigs)(sol.ys['vxx'])
eigv_label = ['S(t) eigenvalues'] + [None] * (problem_params['nx']-1)
eig_plot_fct = pl.plot # = pl.semilogy
eig_plot_fct(sol.ys['t'], S_eigenvalues, color='C0', marker='.', linestyle='', label=eigv_label)
# also as line bc this line is more accurate than the "interpolated" one below if timesteps become very small
eig_plot_fct(sol.ys['t'], S_eigenvalues, color='C0')
# eigenvalues interpolated. though this is kind of dumb seeing how the backward
# solver very closely steps to the non-differentiable points.
sorted_eigs_interp = jax.vmap(sorted_eigs)(interp_ys['vxx'])
eig_plot_fct(interp_ys['t'], sorted_eigs_interp, color='C0', linestyle='--', alpha=.5)
# product of all eigenvalues = det(S)
# dets = np.prod(S_eigenvalues, axis=1)
# eig_plot_fct(sol.ys['t'], dets, color='C1', marker='.', label='prod(eigs(S))', alpha=.5)
pl.legend()
pl.subplot(224, sharex=ax1)
# and raw Vxx entries.
vxx_entries = interp_ys['vxx'].reshape(-1, problem_params['nx']**2)
label = ['entries of Vxx(t)'] + [None] * (problem_params['nx']**2-1)
pl.plot(interp_ys['t'], vxx_entries, label=label, color='green', alpha=.3)
pl.legend()
# or, pd-ness of the ricatti equation terms.
# oups = jax.vmap(ricatti_rhs_eigenvalues)(sol.ys)
# for j, k in enumerate(oups.keys()):
# # this is how we do it dadaTadadadaTada this is how we do it
# label = k # if len(oups[k].shape) == 1 else [k] + [None] * (oups[k].shape[1]-1)
# pl.plot(sol.ys['t'], oups[k], label=label, color=f'C{j}', alpha=.5)
pl.legend()
def plot_us(sols, problem_params, rotate=True, c='C0'):
# plot all the u trajectories of a vmapped solutions object.
# we flatten them here -- the inf padding breaks up the plot nicely
all_xs = sols.ys['x'].reshape(-1, problem_params['nx'])
all_lams = sols.ys['vx'].reshape(-1, problem_params['nx'])
us = jax.vmap(pontryagin_utils.u_star_2d, in_axes=(0, 0, None))(all_xs, all_lams, problem_params)
if rotate:
diff_and_sum = np.array([[1, -1], [1, 1]]).T
us = us @ diff_and_sum
pl.xlabel('u0 - u1')
pl.ylabel('u0 + u1')
else:
pl.xlabel('u0')
pl.ylabel('u1')
pl.plot(us[:, 0], us[:, 1], alpha=0.1, marker='.', c=c)
pl.legend()
def plot_ellipse(Q, N_pts=101):
# plot ellipse S = {x | x.T Q x = 1}
# x.T Q x = x.T Q^.5.T Q^.5 x = || Q^.5 x || == 1
# so basically, Q^.5 x is the unit circle, for x in S.
# Therefore, Q^(-1/2) (unit circle) = S
thetas = np.linspace(0, 2*np.pi, N_pts)
circle = jax.vmap(lambda t: np.array([np.cos(t), np.sin(t)]))(thetas).T
# it should be positive definite for a unique solution
# hopefully the user is smart enough
Q_half_inv = jax.scipy.linalg.sqrtm(np.linalg.inv(Q)).real
ellipse = Q_half_inv @ circle
pl.plot(ellipse[0, :], ellipse[1, :], color='red', alpha=.5)
def plot_trajectory_vs_nn(sol, params, v_nn_unnormalised):
# outside, do this:
# v_nn_unnormalised = lambda params, x: normaliser.unnormalise_v(v_nn(params, normaliser.normalise_x(x)))
ax = pl.subplot(211)
interp_ts = np.linspace(sol.t0, sol.t1, 1000)
xs = sol.ys['x']
ts = sol.ys['t']
vs = sol.ys['v']
interp_ys = jax.vmap(sol.evaluate)(interp_ts)
nx = sol.ys['x'].shape[-1]
onelabel = lambda s: [s] + [None] * (nx-1)
pl.plot(interp_ts, interp_ys['v'], alpha=.5, label='trajectory v(x(t))', c='C0')
pl.plot(ts, vs, alpha=.5, linestyle='', marker='.', c='C0')
# same with the NN
vs = jax.vmap(v_nn_unnormalised, in_axes=(None, 0))(params, interp_ys['x'])
pl.plot(interp_ts, vs, c='C1', label='NN v(x(t))')
pl.legend()
# and now the same for vx
pl.subplot(212, sharex=ax)
vxs = sol.ys['vx']
pl.plot(interp_ts, interp_ys['vx'], alpha=.5, label=onelabel('trajectory vx(x(t))'), c='C0')
pl.plot(ts, vxs, alpha=.5, linestyle='', marker='.', c='C0')
nn_vx_fct = jax.jacobian(v_nn_unnormalised, argnums=1)
nn_vxs = jax.vmap(nn_vx_fct, in_axes=(None, 0))(params, interp_ys['x'])
pl.plot(interp_ts, nn_vxs, label=onelabel('NN v_x(x(t))'), c='C1')
pl.legend()
def plot_trajectory_vs_nn_ensemble(sol, vmapped_params, v_nn_unnormalised):
# outside, do this:
# v_nn_unnormalised = lambda params, x: normaliser.unnormalise_v(v_nn(params, normaliser.normalise_x(x)))
ax = pl.subplot(211)
interp_ts = np.linspace(sol.t0, sol.t1, 2000)
xs = sol.ys['x']
ts = sol.ys['t']
vs = sol.ys['v']
interp_ys = jax.vmap(sol.evaluate)(interp_ts)
nx = sol.ys['x'].shape[-1]
onelabel = lambda s: [s] + [None] * (nx-1)
pl.plot(interp_ts, interp_ys['v'], alpha=.5, label='trajectory v(x(t))', c='C0')
pl.plot(ts, vs, alpha=.5, linestyle='', marker='.', c='C0')
confidence_width = 1 # make small to look better.
# same with the NN
# inner vmap for ys, outer vmap for params.
vs = jax.vmap(jax.vmap(v_nn_unnormalised, in_axes=(None, 0)), in_axes=(0, None))(vmapped_params, interp_ys['x'])
vs_mean = vs.mean(axis=0)
vs_std = vs.std(axis=0)
pl.plot(interp_ts, vs_mean, c='C1', label='NN v mean')
pl.fill_between(interp_ts, vs_mean - confidence_width * vs_std, vs_mean + confidence_width * vs_std, color='C1', alpha=.2, label=f'NN v {confidence_width}σ band')
pl.legend()
# and now the same for vx
pl.subplot(212, sharex=ax)
vxs = sol.ys['vx']
pl.plot(interp_ts, interp_ys['vx'], alpha=.5, label=onelabel('trajectory vx(x(t))'), c='C0')
pl.plot(ts, vxs, alpha=.5, linestyle='', marker='.', c='C0')
nn_vx_fct = jax.jacobian(v_nn_unnormalised, argnums=1)
# shaped (N_params, N_ts, nx)
vxs = jax.vmap(jax.vmap(nn_vx_fct, in_axes=(None, 0)), in_axes=(0, None))(vmapped_params, interp_ys['x'])
# mean/std of NN ensemble
vx_means = vxs.mean(axis=0)
vx_stds = vxs.std(axis=0)
nx = sol.ys['x'].shape[-1]
# do this in a loop because fill_between does not like vectorised data
for j in range(nx):
label = 'NN vx mean' if j==0 else None
pl.plot(interp_ts, vx_means[:, j], label=label, c='C1')
lower = vx_means[:, j] - confidence_width*vx_stds[:, j]
upper = vx_means[:, j] + confidence_width*vx_stds[:, j]
label = f'NN vx {confidence_width}σ band' if j==0 else None
pl.fill_between(interp_ts, lower, upper, color='C1', alpha=.2, label=label)
pl.legend()
def plot_nn_train_outputs(outputs, subsample=256):
# new version of this, for dict output, like:
# outputs.keys() == ['lr', 'test_loss_terms', 'train_loss_terms']
# outputs['test_loss_terms'].keys() == ['prior', 'v', 'vx', 'vx_label', 'vx_reg', whatever really]
# plots the UNSCALED loss terms! so don't fear the worst if some numbers seem rather high or low.
# works for ensemble (each array node of the pytree has an additional leading dim) or single.
# (only ensemble tested though. if single, reshape everything (N,) -> (1, N)? )
# if single, act as if it was an ensemble (with 1 member).
if len(outputs['lr'].shape) == 1:
outputs = jax.tree_util.tree_map(lambda n: n[None, :], outputs)
N_ensemble, N_steps = outputs['lr'].shape
# then, make everything flat for easy plotting, including the "iters" array for the x axis
# also NaN in the last spot to break up lines.
outputs['iters'] = np.kron(np.ones((N_ensemble, 1), dtype=int), np.arange(N_steps))
if subsample != 1:
# makes the plots easier to view & less resource hungry
# outputs = jax.tree_util.tree_map(lambda n: n[:, ::subsample], outputs)
# would be even cooler if we replace just subsampling with moving average...
# idea: reshape from (N_chunks * chunklen) to (N_chunks, chunklen)
# *.mean(axis=1) -> shaped (N_chunks)
chunklen = subsample
N_chunks = N_steps // subsample
# remove the last bit to make evenly divisible
N_steps = N_chunks * subsample
outputs = jax.tree_util.tree_map(lambda n: n[:, 0:N_steps], outputs)
outputs = jax.tree_util.tree_map(lambda n: n.reshape(N_ensemble, N_chunks, chunklen).mean(axis=2), outputs)
outputs = jax.tree_util.tree_map(lambda n: n.at[:, -1].set(np.nan), outputs)
outputs = jax.tree_util.tree_map(lambda n: n.reshape(-1), outputs)
has_test = 'test_loss_terms' in outputs
assert has_test == False, 'not supported anymore here'
# if there is test data we want 2 subplots. otherwise just 1.
if has_test:
ax = pl.subplot(211)
pl.semilogy(outputs['iters'], outputs['lr'], label='learning rate', linestyle='--', color='gray', alpha=.5)
if 'v_sweep' in outputs:
pl.semilogy(outputs['iters'], outputs['v_sweep'], label='v sweep', linestyle='--', alpha=.5)
if 'weight_norm' in outputs:
pl.semilogy(outputs['iters'], outputs['weight_norm'], label='weight norm', linestyle='--', alpha=.5)
for k in outputs['lossterms']:
pl.semilogy(outputs['iters'], outputs['lossterms'][k], alpha=.3, label=f'train {k}')
pl.legend()
pl.grid('on')
pl.ylim([1e-5, 1e3])
def plot_proposals(v_means, v_stds, testpts_known, proposal_vmeans, proposal_vstds, v_k, v_next_target, algo_params):
pl.xlabel('v mean')
pl.ylabel('v std')
pl.loglog(v_means + (np.nan * testpts_known), v_stds, '. ', alpha=.1, c='C1', label='unknown points')
pl.loglog(v_means + (np.nan * ~testpts_known), v_stds, '. ', alpha=.1, c='C0', label='known points')
pl.loglog(proposal_vmeans, proposal_vstds, '. ', alpha=.5, c='green', label='proposed points')
pl.loglog([v_k, v_k], [v_stds.min(), v_stds.max()], linestyle='--', color='black', alpha=.2, label='v_k')
pl.loglog([v_next_target, v_next_target], [v_stds.min(), v_stds.max()], linestyle='--', color='black', alpha=.2, label='v_next_target')
vmax = v_means.max()
plot_vs = np.logspace(-4, np.log10(vmax)+0.5, 200)
plot_sig_maxs = algo_params['sigma_max_abs'] + plot_vs * algo_params['sigma_max_rel']
pl.loglog(plot_vs, plot_sig_maxs, linestyle='--', alpha=.5, label='$σ_{max}(v)$')
pl.legend()
pl.xlim([1e-2, 1e5])
pl.ylim([1e-2, 1e5])
def orbits_plot_all(xx, yy, v_means, v_stds, v_stds_new, vk, vnext, proposals, forward_sols, backward_sols, problem_params, algo_params):
# subplots:
# nn value function & relevant levelsets | uncertainty with proposal samples & proposals
# uncertainty with forward trajs | uncertainty with backward trajs.
ax = pl.subplot(221)
ax.set_aspect('equal')
# plot value
pl.contourf(xx, yy, v_means, levels=np.linspace(0, 2 * vnext, 20))
pl.colorbar()
def plot_common():
# plot level sets
pl.contour(xx, yy, v_means, levels=[vk, vnext, vnext + (vnext - vk)], colors='black')
# plot circle
thetas = np.linspace(-np.pi, np.pi, 300)
circle = np.array([np.sin(thetas), np.cos(thetas)]).T
pl.plot(circle[:, 0], circle[:, 1], c='black', alpha=.1, linestyle='--')
plot_common()
pl.xlabel('v mean')
# now the proposals. proposal samples ('pool') not yet \o/
ax = pl.subplot(222, sharex=ax, sharey=ax)
ax.set_aspect('equal')
sigma_max = algo_params['sigma_max_abs'] + v_means * algo_params['sigma_max_rel']
rel_vstds = np.log10(v_stds / sigma_max) # so that <0 good and >0 bad
vmax_abs = np.max(np.abs(rel_vstds))
pl.plot(*proposals.T, 'x', c='black', alpha=.1, label='proposals')
pl.contourf(xx, yy, rel_vstds, cmap='bwr', vmin=-vmax_abs, vmax=vmax_abs, levels=30)
pl.colorbar()
pl.xlabel('proposals, previous log10(sigma_v / sigma_max)')
plot_common()
# forward trajectories
ax = pl.subplot(223, sharex=ax, sharey=ax)
ax.set_aspect('equal')
sigma_max = algo_params['sigma_max_abs'] + v_means * algo_params['sigma_max_rel']
rel_vstds = np.log10(v_stds / sigma_max) # so that <0 good and >0 bad
vmax_abs = np.max(np.abs(rel_vstds))
pl.contourf(xx, yy, rel_vstds, cmap='bwr', vmin=-vmax_abs, vmax=vmax_abs, levels=30)
pl.colorbar()
pl.plot(forward_sols.ys[:, :, 0].flatten(), forward_sols.ys[:, :, 1].flatten(), '.-', c='black', alpha=.3, label='forward sols')
pl.xlabel('forward trajectories, previous log10(sigma_v / sigma_max)')
plot_common()
pl.legend()
# backward trajectories :)
ax = pl.subplot(224, sharex=ax, sharey=ax)
ax.set_aspect('equal')
sigma_max = algo_params['sigma_max_abs'] + v_means * algo_params['sigma_max_rel']
rel_vstds = np.log10(v_stds_new / sigma_max) # so that <0 good and >0 bad
vmax_abs = np.max(np.abs(rel_vstds))
pl.contourf(xx, yy, rel_vstds, cmap='bwr', vmin=-vmax_abs, vmax=vmax_abs, levels=30)
pl.colorbar()
pl.plot(backward_sols.ys['x'][:, :, 0].flatten(), backward_sols.ys['x'][:, :, 1].flatten(), '.-', c='black', alpha=.3, label='backward sols')
pl.xlabel('backward trajectories, new log10(sigma_v / sigma_max)')
plot_common()
pl.legend()
# zoom in to the relevant part
is_relevant = v_means <= vnext * 2
pl.xlim([xx[is_relevant].min(), xx[is_relevant].max()])
pl.ylim([yy[is_relevant].min(), yy[is_relevant].max()])
def plot_calibration(all_ys, pred_v_means, pred_v_stds):
# calibration plot = plot of true frequency of data in each confidence band
# vs predicted frequency.
# although it may be questioned if this plot is at all relevant for us. we
# basically have deterministic data (except ODE solver error) and just want
# to distinguish between "inside" the known set and "outside" of it.
sigmas = np.linspace(-5, 5, 300)
predicted_fractions = jax.scipy.stats.norm.cdf(sigmas)
# the error between predicted and label, scaled by the std dev.
# if model is well calibrated, this should be normally distributed.
normalised_predictions = (pred_v_means.flatten() - all_ys['v'].flatten()) / pred_v_stds.flatten()
where_usable = ~np.isnan(normalised_predictions)
normalised_predictions = normalised_predictions[where_usable]
observed_fractions = np.mean(normalised_predictions[:, None] < sigmas, axis=0)
pl.plot(predicted_fractions, observed_fractions, '.-')
pl.plot([0, 1], [0, 1], '--', c='black', alpha=.1)
pl.xlabel('predicted fraction')
pl.ylabel('observed fraction')
def plot_loss_distribution(loss_means):
# to get insight on the loss distribution. this will ONLY evaluate the loss
# at the predicted mean, and ignore std. dev. maybe this is not exactly
# relevant though...
# aux_mean: dictionary of auxiliary outputs from loss function, containing
# individual loss function terms, meaned across axis 0 (NN ensemble)
# plot all the cdfs.
def plotcdf(data, **pl_kwargs):
assert len(data.shape) == 1
pl.semilogx(data.sort(), np.linspace(0, 1, data.shape[0]), **pl_kwargs)
for k in loss_means:
plotcdf(loss_means[k].flatten(), label=k)
pl.legend()
def plot_manifold(v_meanstds, vx_meanstds, vmap_params, problem_params):
# visualise the value function when just changing the angle, leaving
# the rest ("cartesian" states) fixed.
thetas = np.linspace(-np.pi, np.pi, 300)
xs = jax.vmap(lambda theta: np.array([0, 0, np.sin(theta), np.cos(theta), 0, 0, 0]))(thetas)
mus, sigmas = v_meanstds(xs, vmap_params)
ax = pl.subplot(211)
pl.plot(thetas, mus, label='value mean')
pl.fill_between(thetas, mus - sigmas, mus + sigmas, color='C0', alpha=.2, label=f'value 1σ confidence')
pl.legend()
vx_mu, vx_sigma = vx_meanstds(xs, vmap_params)
pl.subplot(212, sharex=ax)
pl.plot(thetas, vx_mu, label=problem_params['state_names'])
pl.gca().set_prop_cycle(None)
for j in range(7):
pl.fill_between(thetas, vx_mu[:, j] - vx_sigma[:, j], vx_mu[:, j] + vx_sigma[:, j], alpha=.2)
pl.legend()