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setup.py
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from setuptools import setup, find_packages
from Cellcano import __version__
with open("DESCRIPTION", "r", encoding="utf-8") as fh:
long_description = fh.read()
setup(
name='Cellcano',
version=__version__,
author='Wenjing Ma',
author_email='[email protected]',
url='https://github.com/marvinquiet/Cellcano',
project_urls={
"Documentation": "https://marvinquiet.github.io/Cellcano/",
"Bug Tracker": "https://github.com/marvinquiet/Cellcano/issues",
},
description='Cellcano is for supervised cell type identification (celltyping) in single-cell genomics.',
long_description=long_description,
long_description_content_type="text/plain",
license='MIT',
packages=find_packages(),
entry_points={
"console_scripts": ["Cellcano=Cellcano.main:main"]
},
python_requires=">=3.8",
install_requires=[
'tensorflow == 2.7.1',
'six~=1.15.0',
'anndata == 0.7.4',
'scanpy == 1.8.2',
'numpy == 1.19.2',
'h5py == 2.10.0',
'keras',
'rpy2'
]
)