Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[Feature request] Host a STAR index for this build #75

Open
jolespin opened this issue Mar 9, 2023 · 0 comments
Open

[Feature request] Host a STAR index for this build #75

jolespin opened this issue Mar 9, 2023 · 0 comments

Comments

@jolespin
Copy link

jolespin commented Mar 9, 2023

I use the CHM13_v2.0 bowtie2 index for all my human decontamination of metagenomic reads in the backend of my VEBA package which works great! Bowtie2 ended up hosting a bowtie2 index on their website.

Since this build will likely be used quite a bit for RNA-seq analysis, would it be possible for your institute to host a STAR index since that is one of the most widely used exon-aware aligners?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant