Aborted (core dumped)

[duhaiyuan]

Hello professors:
Thanks for providing such a good tool!

I got a issue when running yak qv, the message is shown below.

[M::yak_ch_restore_core] inserted 1145802121 k-mers, of which 1145802121 are new
CC CT kmer_occurrence short_read_kmer_count raw_input_kmer_count adjusted_input_kmer_count
CC FR fpr_lower_bound fpr_upper_bound
CC ER total_input_kmers adjusted_error_kmers
CC CV coverage
CC QV raw_quality_value adjusted_quality_value
CC
[M::yak_qv_cb] read 125 sequences
[M::yak_qv_cb] read 0 sequences
[M::[email protected]*3.77] processed 125 sequences
[M::yak_qv_cb] read 0 sequences
yak: qv.c:232: yak_qv_solve: Assertion `adj_sum <= (double)qs->tot' failed.
Aborted (core dumped)

Could you please give me some advice about how to solve the problem? Thank you so much.

Look foward to your reply!

HY

[lh3]

This is a reoccurring issue in #5, too. I have added a temporary fix. The QV estimate is not accurate when you see

WARNING: failed to estimate the calibrated QV

I will leave this issue open. As I said, this is only a temporary fix.

[duhaiyuan]

This is a reoccurring issue in #5, too. I have added a temporary fix. The QV estimate is not accurate when you see

WARNING: failed to estimate the calibrated QV

I will leave this issue open. As I said, this is only a temporary fix.

Thanks for your prompt reply.
No errors were found during the run，I have got the results and understood the explanation about the results. Thank you very much.

Best wishes!
HY