Failed building wheel for cloud-identification

[am-thyst]

Hi Leif, having some problems with a fresh install on Linux.

Inside a conda environment, python -m pip install cloud-genesis runs successfully until the following errors:

Building wheels for collected packages: cloud-identification, pystan
  Building wheel for cloud-identification (setup.py) ... error
  error: subprocess-exited-with-error

  × python setup.py bdist_wheel did not run successfully.
  │ exit code: 1
  ╰─> [59 lines of output]
      running bdist_wheel
      running build
      running build_ext
      CMake Warning:
        Ignoring extra path from command line:

         "/glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/cloud-identification_7c25ae190e1f4fd9ac0fee20bf4405b3"


      CMake Error: The source directory "/glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/cloud-identification_7c25ae190e1f4fd9ac0fee20bf4405b3" does not appear to contain CMakeLists.txt.
      Specify --help for usage, or press the help button on the CMake GUI.
      Traceback (most recent call last):
        File "<string>", line 2, in <module>
        File "<pip-setuptools-caller>", line 34, in <module>
        File "/glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/cloud-identification_7c25ae190e1f4fd9ac0fee20bf4405b3/setup.py", line 122, in <module>
          setup(
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/__init__.py", line 104, in setup
          return distutils.core.setup(**attrs)
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/core.py", line 184, in setup
          return run_commands(dist)
                 ^^^^^^^^^^^^^^^^^^
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/core.py", line 200, in run_commands
          dist.run_commands()
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
          self.run_command(cmd)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/dist.py", line 967, in run_command
          super().run_command(command)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/wheel/bdist_wheel.py", line 368, in run
          self.run_command("build")
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/cmd.py", line 316, in run_command
          self.distribution.run_command(command)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/dist.py", line 967, in run_command
          super().run_command(command)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/command/build.py", line 132, in run
          self.run_command(cmd_name)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/cmd.py", line 316, in run_command
          self.distribution.run_command(command)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/dist.py", line 967, in run_command
          super().run_command(command)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/command/build_ext.py", line 91, in run
          _build_ext.run(self)
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/command/build_ext.py", line 359, in run
          self.build_extensions()
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/command/build_ext.py", line 479, in build_extensions
          self._build_extensions_serial()
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/site-packages/setuptools/_distutils/command/build_ext.py", line 505, in _build_extensions_serial
          self.build_extension(ext)
        File "/glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/cloud-identification_7c25ae190e1f4fd9ac0fee20bf4405b3/setup.py", line 115, in build_extension
          subprocess.check_call(
        File "/glade/u/home/amethystj/miniconda3/envs/wrfenv/lib/python3.12/subprocess.py", line 413, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['cmake', '/glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/cloud-identification_7c25ae190e1f4fd9ac0fee20bf4405b3', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/cloud-identification_7c25ae190e1f4fd9ac0fee20bf4405b3/build/lib.linux-x86_64-cpython-312/', '-DPYTHON_EXECUTABLE=/glade/u/home/amethystj/miniconda3/envs/wrfenv/bin/python', '-DCMAKE_BUILD_TYPE=Release', '-DEXAMPLE_VERSION_INFO=0.3.0']' returned non-zero exit status 1.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for cloud-identification
  Running setup.py clean for cloud-identification
  Building wheel for pystan (setup.py) ... error
  error: subprocess-exited-with-error

  × python setup.py bdist_wheel did not run successfully.
  │ exit code: 1
  ╰─> [3 lines of output]
      /glade/derecho/scratch/amethystj/tmp/pip-install-n_1tnpsa/pystan_ac7f2aa0cbc1476598ba0d4d263afba5/setup.py:61: DeprecationWarning: Attribute s is deprecated and will be removed in Python 3.14; use value instead
        self.version = node.value.s
      Cython>=0.22 and NumPy are required.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for pystan
  Running setup.py clean for pystan
Failed to build cloud-identification pystan
ERROR: Could not build wheels for cloud-identification, pystan, which is required to install pyproject.toml-based projects

cmake=3.26.4
python=3.12
cython=3.0.11
numpy=1.26.4