diff --git a/.Rbuildignore b/.Rbuildignore index bb1ad41..d1400d0 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -1,3 +1,4 @@ +\.travis\.yml ^.*\.Rproj$ ^\.Rproj\.user$ test\.R diff --git a/DESCRIPTION b/DESCRIPTION index 2e28319..3c32e41 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -15,4 +15,4 @@ Imports: dplyr Depends: mrgsolve Suggests: ggplot2, testthat Roxygen: list(markdown = TRUE) -RoxygenNote: 6.1.1 +RoxygenNote: 7.1.1 diff --git a/R/vera.R b/R/vera.R index f630eaa..22100bd 100644 --- a/R/vera.R +++ b/R/vera.R @@ -40,7 +40,7 @@ dvalue <- function(sim,ref,scale) { #' @param ... arguments passed to `fun` #' #' @examples -#' mod <- mrgsolve::modlib("pk1",delta=0.1) +#' mod <- mrgsolve::house("pk1",delta=0.1) #' #' par <- "CL,V,KA" #' @@ -48,7 +48,7 @@ dvalue <- function(sim,ref,scale) { #' #' dose <- ev(amt = 100) #' -#' fun <- function(p) mrgsim_e(mod,dose,param=p,output="df") +#' fun <- function(p) mrgsolve::mrgsim_e(mod,dose,param=p,output="df") #' #' out <- lsa(mod, fun, par, var) #' diff --git a/inst/covr/coverage.md b/inst/covr/coverage.md index 5e05516..03498ef 100644 --- a/inst/covr/coverage.md +++ b/inst/covr/coverage.md @@ -1,5 +1,5 @@ -# coverage: 94.59% +# coverage: 87.8% |file | coverage| |:--------|--------:| -|R/vera.R | 94.59| +|R/vera.R | 87.8| diff --git a/inst/covr/zero.md b/inst/covr/zero.md index 3d93384..f992d2c 100644 --- a/inst/covr/zero.md +++ b/inst/covr/zero.md @@ -1,5 +1,11 @@ "","filename","functions","line","value" "1","R/vera.R","cvec_cs",7,0 "6","R/vera.R","cvec_cs",12,0 -"62","R/vera.R","plot.lsa",104,0 -"63","R/vera.R","plot.lsa",105,0 +"17","R/vera.R","lsa",62,0 +"18","R/vera.R","lsa",64,0 +"34","R/vera.R","lsa",81,0 +"35","R/vera.R","lsa",82,0 +"36","R/vera.R","lsa",83,0 +"37","R/vera.R","lsa",84,0 +"70","R/vera.R","plot.lsa",131,0 +"71","R/vera.R","plot.lsa",132,0 diff --git a/tests/testthat/test-vera.R b/tests/testthat/test-vera.R index 9840b93..0f0e672 100644 --- a/tests/testthat/test-vera.R +++ b/tests/testthat/test-vera.R @@ -1,6 +1,9 @@ +library(testthat) +library(vera) + context("basic functionality") -mod <- suppressMessages(mrgsolve::modlib("pk1")) +mod <- suppressMessages(mrgsolve::house()) fun <- function(p) { mod %>%