README.md

ksumngs/nf-modules

nf-core-compatible Nextflow modules with a Wildcat flavor.

Usage

You'll need nf-core tools. Using our modules is basically the same as using vanilla nf-core modules, but just add -g ksumngs/nf-modules to each command.

$ nf-core modules -g ksumngs/nf-modules list remote

                                          ,--./,-.
          ___     __   __   __   ___     /,-._.--~\
    |\ | |__  __ /  ` /  \ |__) |__         }  {
    | \| |       \__, \__/ |  \ |___     \`-._,-`-,
                                          `._,._,'

    nf-core/tools version 2.3.dev0



INFO     Modules available from ksumngs/nf-modules (master):    list.py:123

┏━━━━━━━━━━━━━━━━━━━━━━┓
┃ Module Name          ┃
┡━━━━━━━━━━━━━━━━━━━━━━┩
│ cat/fastq            │
│ cliquesnv/illumina   │
│ cliquesnv/illuminavc │
│ edirect/efetch       │
...