Chromosome length bounded to 20 Mbp

[guiSalle]

Hello,

I have tried the ReLERNN pipeline on some poolseq data for a genome including 5 chromosomes of about 45 Mbp each.
The pipeline works fine but I noticed that the maximal position considered in the splitPOOL files is 20Mbp.
I guess this is a result of the max number of sites the pipeline can handle at once, is this correct ? Or is there any other issue I should worry about ?

In any case, great tool and impressive computational performances.

Best,
Guillaume

[andrewkern]

Hello- yes there is a limit due to memory constraints. We recommend you split large chromosomes into pieces to get predictions. It should not affect the estimates.