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Unify interval.stop vs interval.end for resize_interval and extractors #10

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Avsecz opened this issue Oct 13, 2018 · 0 comments
Open

Unify interval.stop vs interval.end for resize_interval and extractors #10

Avsecz opened this issue Oct 13, 2018 · 0 comments

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@Avsecz
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Avsecz commented Oct 13, 2018

Currently, the resize_interval looks uses interval.end whereas genomelake.extractors use interval.stop (https://github.com/kundajelab/genomelake/blob/master/genomelake/extractors.py#L65). Both work when the interval is pybedtools.Interval, however, they fail when the class is say kipoi.metadata.GenomicRanges.
@Avsecz Avsecz changed the title Resize_interval stop vs end Unify interval.stop vs interval.end for resize_interval and extractors Oct 13, 2018
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