Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Load Gharavi data in variant page #3330

Open
4 of 11 tasks
botekchristophe opened this issue Jun 11, 2021 · 1 comment
Open
4 of 11 tasks

Load Gharavi data in variant page #3330

botekchristophe opened this issue Jun 11, 2021 · 1 comment
Assignees
@botekchristophe
Labels
Blocked [Status] blocked ETL Variant [Scope] Related to the Variant

Comments

@botekchristophe
Copy link

botekchristophe commented Jun 11, 2021 •
edited
Loading

in schema 'portal' and RE_000011

  • upload save set with all participants from the 5 studies
  • compute occurences family for SD_NMVV8A1Y
  • compute occurences for SD_NMVV8A1Y
  • compute variants for SD_NMVV8A1Y
  • compute join variants for SD_NMVV8A1Y
  • compute consequences for SD_NMVV8A1Y
  • compute join consequences for SD_NMVV8A1Y
  • compute prepare_variant centric
  • compute genomic suggestions
  • index prepare_variant centric
  • index genomic suggestions
@botekchristophe botekchristophe added ETL Variant [Scope] Related to the Variant labels Jun 11, 2021
@botekchristophe botekchristophe self-assigned this Jun 11, 2021
@botekchristophe botekchristophe added the Blocked [Status] blocked label Jun 15, 2021
@botekchristophe
Copy link
Author

the study was not release yet. We should check again in few month with chop if the data can be indexed

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@botekchristophe botekchristophe

Labels
Blocked [Status] blocked ETL Variant [Scope] Related to the Variant
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@botekchristophe