remote_notebooks.md

remote running jupyter

jupyter notebook

function jpt_remote(){ jupyter notebook --no-browser --port=$1 }

jupyter-lab

function jptlab_remote(){ jupyter-lab --no-browser --port=$1 }

local port listening

ssh -o ExitOnForwardFailure=yes -f -N -L :localhost: remout_user_name@remote_server_name

download directory with all files

wget -r -l 1 ftp://ftp.ebi.ac.uk/pub/databases/gwas/releases/latest/*

kill all pultiprocess from python script

kill -9 ps -ef | grep script.py | grep -v grep | awk '{print $2}'

attach docker container shell

docker exec -it container_id bash

dump postrges db

pg_dump --file "db_name" --host "ip_host" --port "5432" --username "user_name" --verbose --role "user_name" --format=c --blobs --compress "8" "db_name"

dump postrges db

pg_dump database_name > database_name_file

split and merge big archive

tar -cvvzf <archive-name>.tar.gz /path/to/folder
cat archive-name* > test.tar.gz