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<!DOCTYPE html>
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<meta charset="utf-8">
<title>GPS :: Global Pneumococcal Sequencing Project</title>
<meta name="description" content="">
<meta name="viewport" content="width=device-width, initial-scale=1">
<link rel="stylesheet" href="https://netdna.bootstrapcdn.com/bootstrap/3.1.0/css/bootstrap.min.css">
<link href='https://fonts.googleapis.com/css?family=Open+Sans:400italic,600italic,400,300,600' rel='stylesheet' type='text/css'>
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display:inline-block;
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width: 460px;
height: 300px;
margin-left: 50px;
border: 1px solid #1570a6;
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margin-left: 50px;
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transition:cubic-bezier(0.175, 0.885, 0.32, 1.275);
opacity:0.8;
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color: #1570a6;
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#mapid {
height: 720px;
margin-top: 100px;
}
img.leaflet-marker-icon:hover {
transition:cubic-bezier(0.175, 0.885, 0.32, 1.275);
opacity:0.8;
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/* Popover styling */
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text-decoration: none;
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font-family: 'Helvetica Neue', Helvetica, Arial, sans-serif;
font-size: 24px;
line-height: 36px;
text-decoration: none;
color: rgb(228, 68, 68);
text-align: center;
padding: 15px 0;
}
.popover__wrapper {
position: relative;
margin-top: 1.5rem;
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opacity: 0;
visibility: hidden;
position: absolute;
left: -150px;
transform: translate(0,10px);
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background-color: #e2f0f4;
padding: 1.5rem;
box-shadow: 0 2px 5px 0 rgba(0, 0, 0, 0.26);
width: auto;
margin-left: 60px;
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position: absolute;
z-index: -1;
content: '';
right: calc(50% - 10px);
top: -8px;
border-style: solid;
border-width: 0 10px 10px 10px;
border-color: transparent transparent #e2f0f4 transparent;
transition-duration: 0.3s;
transition-property: transform;
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z-index: 10;
opacity: 1;
visibility: visible;
transform: translate(0,-20px);
transition: all 0.5s cubic-bezier(0.75, -0.02, 0.2, 0.97);
}
.popover__message {
text-align: center;
}
.chartsdiv {
height: 350px;
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input:focus {
outline-offset: -2px;
}
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display: inline-block;
}
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width: auto;
margin-right: 5px;
display: inline-block;
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min-width: 255px;
margin-bottom: 40px;
z-index: 100;
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z-index: 0;
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margin-top:5px;
overflow-x:auto;
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margin-top: 120px;
overflow-x:auto;
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border-width: 1px !important;
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input.borderset {
height: 22px;
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div.modal-body {
padding: 0px;
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color: #1570a6;
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svg#Micro {
max-height: 30px;
display: inline-block;
margin-top: 5px;
}
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display: inline-block;
}
.sampleText, .sampleSize {
display:inline-block;
margin-left: 82px;
}
.microreactLink {
display: inline-block;
margin-left: 150px;
}
div#bar-one, div#bar-two, div#bar-three, div#bar-four, svg {
display: inline;
max-width: 140px;
margin-left: 10px;
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display: inline-block;
width: 140px;
margin-left: 10px;
}
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display: inline-block;
min-height: 325px;
max-height: 400px;
width: 170px;
margin-left: 5px;
}
div#legend-three, div#legend-four {
display: inline-block;
width: 110px;
margin-left: 10px;
}
svg {
height:320px;
width: 130px;
margin-left: 10px;
}
div.legendBox{height: 18px !important;
width: 18px;
display: inline-block;
margin-right: 4px;}
g.legend, g.yearlegend {display: block;
margin-left: 10px;
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g.yearlegend {display: inline-block;
margin-left: 10px;
margin-right: 4px;}
text.legendText { font-size: 14px;}
rect:hover {
fill-opacity:0.9;
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.cls-6{fill:#3c7382;}
</style>
<!-- HTML5 Support for IE -->
<!--[if lt IE 9]>
<script src="//cdnjs.cloudflare.com/ajax/libs/html5shiv/3.7.2/html5shiv.min.js"></script>
<script src="//cdnjs.cloudflare.com/ajax/libs/html5shiv/3.7.2/html5shiv-printshiv.min.js"></script>
<script src="//cdnjs.cloudflare.com/ajax/libs/es5-shim/3.4.0/es5-shim.js"></script>
<script src="//cdnjs.cloudflare.com/ajax/libs/es5-shim/3.4.0/es5-sham.js"></script>
<![endif]-->
<!-- Favicon -->
<link rel="shortcut icon" href="gps.ico">
<link rel="stylesheet" href="https://unpkg.com/[email protected]/dist/leaflet.css"
integrity="sha512-Rksm5RenBEKSKFjgI3a41vrjkw4EVPlJ3+OiI65vTjIdo9brlAacEuKOiQ5OFh7cOI1bkDwLqdLw3Zg0cRJAAQ=="
crossorigin=""/>
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crossorigin=""></script>
</head>
<body>
<!-- Header Starts -->
<header>
<div class="container">
<div class="row">
<div class="logo">
<h1><i class=""></i><a href="index.html"><span class="color">GPS</span></a></h1>
<div class="hmeta">Global Pneumococcal Sequencing Project</div>
</div>
</div>
</div>
</header>
<!-- Navigation bar starts -->
<div class="navbar navbar-default bs-docs-nav top-menu" role="banner">
<div class="container">
<div class="navbar-header">
<button class="navbar-toggle" type="button" data-toggle="collapse" data-target=".bs-navbar-collapse">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
</div>
<nav class="collapse navbar-collapse bs-navbar-collapse" role="navigation">
<ul class="nav navbar-nav">
<li class="active">
<a id="home" href="index.html">
<!-- <i class="fa fa-home blue"> </i> --> Home
</a>
</li>
<li class="dropdown">
<a class="dropdown-toggle" data-toggle="dropdown" href="#">
About <b class="caret"></b>
</a>
<ul class="dropdown-menu">
<li class=""><a id="summary" href="project_outline.html">Project Outline</a></li>
<li class=""><a id="summary" href="the_team.html">The Team</a></li>
<li class=""><a id="founders" href="partners.html">Project Partners </a></li>
<li class=""><a id="substudies" href="substudies.html">Sub-studies</a></li>
</ul>
</li>
<li class="dropdown">
<a class="dropdown-toggle" data-toggle="dropdown" href="#">Resources <b class="caret"></b></a>
<ul class="dropdown-menu">
<li class=""><a id="resources_overview" href="resources_overview.html">Overview</a></li>
<li class=""><a id="sampling_map" href="sampling_map.html">Countries</a></li>
<li class=""><a id="GPSC_lineages" href="GPSC_lineages.html">Strains</a></li>
<li class=""><a id="serotypes" href="serotypes.html">Serotypes</a></li>
<!-- <li class=""><a id="public_database" href="/public_database.html">Database (public)</a></li> -->
<li class=""><a id="pmen" href="pmen.html">PMEN Clones</a></li>
<li class=""><a id="isolate_bank_request" href="isolate_bank_request.html">Isolate Bank Request</a></li>
</ul>
</li>
<li><a id="publications" href="publications.html">Publications</a></li>
<li><a id="capacity_building" href="capacity_building.html">Capacity Building</a></li>
<li><a id="gps-database-overview" href="gps-database-overview" target="_blank">GPS Database</a></li>
<li><a id="gps-visualiser" href="gps-visualiser" target="_blank">GPS Visualiser</a></li>
<li class="dropdown">
<a class="dropdown-toggle" data-toggle="dropdown" href="#">Training <b class="caret"></b></a>
<ul class="dropdown-menu">
<li class=""><a id="training_browser_based" href="training_drag_and_drop.html">Drag and Drop Tools</a></li>
<li class=""><a id="training_command_line" href="training_command_line.html">Command Line</a></li>
</ul>
</li>
<li><a id="contact" href="contact.html">Contact</a></li>
</ul>
</nav>
</div>
</div>
<!-- Navigation bar ends -->
<div id="content">
<div class="container">
<div class="banner">
<div class="row">
<div class="col-lg-3 col-md-3 col-sm-3 text-center">
<img class="logo-home" src="img/gps_banner.jpg" />
</div>
<div class="col-lg-9 col-md-9 col-sm-9 col-xs-12">
<h2>The Global Pneumococcal Sequencing Project</h2>
<ul>
<li>
A worldwide genomic survey of the impact of vaccination on the pathogen population
</li>
</ul>
</div>
</div>
</div>
</div>
<section>
<div class="container content">
<header>
<h1>Our Mission</h1>
</header>
<p class="head">
We employ whole genome sequencing of large numbers of isolates to create a picture of the evolution of <span class="italics">Streptococcus pneumoniae</span> during the introduction of pneumococcal conjugate vaccines to characterise patterns of genetic adaptation on global and regional scales
</p><br>
<div class='imageDivLeft'>
<a href='GPSC_lineages.html'>
<h3 class='imageTitle center'>Explore strains</h3>
<image class="pageImageLeft center" src='GPSCs.png' alt="Screen shot of GPSC clusters" class="img-responsive"></image></a>
</div>
<div class='imageDivRight'>
<a href='new_sampling_map.html'>
<h3 class='imageTitle center'>Explore countries</h3>
<image class="pageImageRight center" src='Sample-map.png' alt="Screen shot of World map" class="img-responsive"></image></a>
</div>
<br>
</div>
</section>
<section>
<div class="container content"><br>
<div class="row">
<div class="col-lg-5 col-md-5 col-sm-6">
<!-- Title -->
<h1>Project Leaders</h1>
<div class="table-responsive">
<table class="table table-striped table-condensed">
<tr>
<td>
Stephen Bentley,
<a target="_blank" href="https://www.sanger.ac.uk">
<span class="small">Wellcome Trust Sanger Institute</span>
</a>
</td>
<td>
<a class="small" id="map_view" target="_blank" href="https://www.sanger.ac.uk/people/directory/bentley-stephen-d"> <i class="fa fa-arrow-circle-right oblue"></i> </a>
</td>
</tr>
<tr>
<td>
Lesley McGee,
<a target="_blank" href="https://www.cdc.gov/">
<span class="small">Centers for Disease Control and Prevention</span>
</a>
</td>
<td>
<a class="small" id="map_view" target="_blank" href="https://sph.emory.edu/faculty/profile/#LMCGEE"> <i class="fa fa-arrow-circle-right oblue"></i> </a>
</td>
</tr>
<tr>
<td>
Robert Breiman,
<a target="_blank" href="https://www.globalhealth.emory.edu/">
<span class="small">The Emory Global Health Institute</span>
</a>
</td>
<td>
<a class="small" id="map_view" target="_blank" href="https://globalhealth.emory.edu/who/leadership/breiman.html"> <i class="fa fa-arrow-circle-right oblue"></i> </a>
</td>
</tr>
</table>
</div>
</div><div class="col-lg-1 col-md-1"> </div>
<div class="col-lg-6 col-md-6 col-sm-6">
<div class="row">
<div class="col-lg-4 col-md-5 col-sm-12 col-xs-12">
<h1>Funded by</h1>
</div>
<div class="col-lg-6 col-md-7 col-sm-8 col-xs-5">
<a target="_blank" href="https://www.gatesfoundation.org/">
<img src="img/gates.gif" class="img-responsive">
</a>
</div>
</div>
<div class="row"><hr>
<div class="col-lg-4 col-md-4 col-sm-12 col-xs-12">
<h3>Co-funded by</h3>
</div>
<div class="col-lg-6 col-md-6 col-sm-8 col-xs-5">
<a target="_blank" href="https://www.wellcome.ac.uk/">
<img src="img/wellcome_trust.jpg" style="width:80%;" class="img-responsive">
</a>
</div>
</div>
<div class="clearfix"></div>
</div>
</div>
<br>
</div>
</section>
<!------------------ Funders Logo ---------------->
<section>
<div class="container">
<header>
<h1>Founding Partners<h1>
</header>
<div class="desc">
<ul class="hover-block text-left">
<li>
<a target="_blank" href="https://www.cdc.gov/">
<!-- Image logo-->
<img src="img/cdc-Logo.png" alt="United States Centers for Disease Control and Prevention" title="United States Centers for Disease Control and Prevention" />
</a>
</li>
<li>
<a target="_blank" href="https://www.globalhealth.emory.edu/">
<!-- Image logo-->
<img src="img/emory.png" alt="Global Health - Emory University" title="Global Health - Emory University" />
</a>
</li>
<li>
<a target="_blank" href="https://www.mlw.medcol.mw/">
<!-- Image logo-->
<img src="img/mlw_logo.jpg" alt="Malawi-Liverpool Wellcome Trust Clinical Research Programme" title="Malawi-Liverpool Wellcome Trust Clinical Research Programme" />
</a>
</li>
<li>
<a target="_blank" href="https://www.mrc.gm/">
<!-- Image logo-->
<img src="img/mrc-gambia.png" alt="Medical Research Council Unit, The Gambia" title="Medical Research Council Unit, The Gambia" />
</a>
</li>
<li>
<a target="_blank" href="https://www.nicd.ac.za/">
<!-- Image logo-->
<img src="img/nicd-logo.png" alt="National Institute for Communicable Diseases" title="National Institute for Communicable Diseases" />
</a>
</li>
<li>
<a target="_blank" href="https://www.sanger.ac.uk">
<!-- Image logo-->
<img src="img/sanger-logo.svg" alt="Wellcome Sanger Institute" title="Wellcome Sanger Institute" style="padding: 45px 0;" />
</a>
</li>
</ul>
</div>
</div>
<br>
</section>
</div>
<div id="modal"></div>
<footer class="footer">
<!------------------ Social Communications ---------------->
<section id="social-footer">
<div class="container">
<div class="row">
<br>
<!-- Twitter widget here -->
<div class="col-lg-7 col-md-6 col-sm-5">
<h1><i class="fa fa-twitter lblue"></i> </h1>
<a class="twitter-timeline" href="https://twitter.com/pneumowatch" data-widget-id="431451222445285377">Tweets by @pneumowatch</a>
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<!-- END: Twitter website widget (https://twitterforweb.com) -->
</div>
<div class="col-lg-5 col-md-6 col-sm-7">
<h1><i class="lblue"></i> GPS Symposium at ISPPD 2018</h1>
<img src="img/GPSimage.png" class="img-responsive">
</div>
</div>
</div><hr>
</section>
<div class="container">
<div class="row copy">
<div class="col-lg-7 col-md-7 col-sm-12 copy-left">
<span>GPS © 2022</span> -
<a href="cookiespolicy.html" onclick="">Cookies policy</a> | <a href="legal.html">Terms & Conditions.</a>
</div>
<div class="col-lg-5 col-md-5 col-sm-12 copy-right">
This site is hosted by the <a href="https://www.sanger.ac.uk/">Wellcome Trust Sanger Institute</a>
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</div>
</div>
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