From a7e4d60c4679ff39204c201c77047f05a4ebda5a Mon Sep 17 00:00:00 2001
From: Isabel Paredes <isabel.paredes@quantstack.net>
Date: Wed, 3 Jan 2024 13:06:13 +0100
Subject: [PATCH 1/5] Fix swapped env files

---
 .../environment-wasm-build.yml                           | 9 ++++-----
 {{cookiecutter.github_project_name}}/environment.yml     | 9 +++++----
 2 files changed, 9 insertions(+), 9 deletions(-)

diff --git a/{{cookiecutter.github_project_name}}/environment-wasm-build.yml b/{{cookiecutter.github_project_name}}/environment-wasm-build.yml
index f8ef576..df6a0cc 100644
--- a/{{cookiecutter.github_project_name}}/environment-wasm-build.yml
+++ b/{{cookiecutter.github_project_name}}/environment-wasm-build.yml
@@ -1,8 +1,7 @@
-name: {{cookiecutter.conda_package_name}}
+name: {{cookiecutter.conda_package_name}}-wasm-build
 channels:
   - conda-forge
 dependencies:
-  - {{cookiecutter.conda_package_name}}=0.1.0
-  - notebook
-  - ipywidgets>=7.6
-  - jupyterlab=3
+  - cmake
+  - emsdk >=3.1.11
+  - empack >=2.0.1
diff --git a/{{cookiecutter.github_project_name}}/environment.yml b/{{cookiecutter.github_project_name}}/environment.yml
index df6a0cc..473db6c 100644
--- a/{{cookiecutter.github_project_name}}/environment.yml
+++ b/{{cookiecutter.github_project_name}}/environment.yml
@@ -1,7 +1,8 @@
-name: {{cookiecutter.conda_package_name}}-wasm-build
+name: {{cookiecutter.conda_package_name}}
 channels:
   - conda-forge
 dependencies:
-  - cmake
-  - emsdk >=3.1.11
-  - empack >=2.0.1
+  - {{cookiecutter.conda_package_name}}=0.1.0
+  - notebook
+  - ipywidgets>=7.6
+  - jupyterlab=3
\ No newline at end of file

From f9eb3dc0ec6c7d3857d6cb6b585047b75ee4dbb4 Mon Sep 17 00:00:00 2001
From: Isabel Paredes <isabel.paredes@quantstack.net>
Date: Wed, 3 Jan 2024 13:11:56 +0100
Subject: [PATCH 2/5] Update platform name

---
 {{cookiecutter.github_project_name}}/.github/workflows/main.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
index db48be6..c95bbff 100644
--- a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
+++ b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
@@ -226,7 +226,7 @@ jobs:
           emsdk activate ${{ matrix.emsdk_ver }}
           {% endraw %}
           source $CONDA_EMSDK_DIR/emsdk_env.sh
-          micromamba create -f environment-wasm-host.yml --platform=emscripten-32
+          micromamba create -f environment-wasm-host.yml --platform=emscripten-wasm32
 
           mkdir build
           pushd build

From f2518f8d07474afaf8cd6670196a84bcb5ca8b66 Mon Sep 17 00:00:00 2001
From: Isabel Paredes <isabel.paredes@quantstack.net>
Date: Wed, 3 Jan 2024 13:22:03 +0100
Subject: [PATCH 3/5] Update emscripten version

---
 .../.github/workflows/main.yml                              | 6 +++---
 .../environment-wasm-build.yml                              | 4 ++--
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
index c95bbff..12a0058 100644
--- a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
+++ b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
@@ -102,12 +102,12 @@ jobs:
 
   {% if cookiecutter.with_wasm == "yes" -%}
   emscripten_wasm_docker:
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
 
     strategy:
       fail-fast: false
       matrix:
-        container: ["emscripten/emsdk:2.0.34", "emscripten/emsdk:3.1.3", "emscripten/emsdk:latest"]
+        container: ["emscripten/emsdk:latest"]
 
     {% raw %}
     container: ${{ matrix.container}}
@@ -201,7 +201,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        emsdk_ver: ["2.0.34", "3.1.3"]
+        emsdk_ver: ["3.1.46"]
 
     steps:
       - uses: actions/checkout@v4
diff --git a/{{cookiecutter.github_project_name}}/environment-wasm-build.yml b/{{cookiecutter.github_project_name}}/environment-wasm-build.yml
index df6a0cc..7cfd685 100644
--- a/{{cookiecutter.github_project_name}}/environment-wasm-build.yml
+++ b/{{cookiecutter.github_project_name}}/environment-wasm-build.yml
@@ -3,5 +3,5 @@ channels:
   - conda-forge
 dependencies:
   - cmake
-  - emsdk >=3.1.11
-  - empack >=2.0.1
+  - emsdk >=3.1.46
+  - empack >=3.2.0

From 3b731030abeffebe525175e40f828d6dab49b7a7 Mon Sep 17 00:00:00 2001
From: Isabel Paredes <isabel.paredes@quantstack.net>
Date: Wed, 3 Jan 2024 13:35:23 +0100
Subject: [PATCH 4/5] Use cores action

---
 .../.github/workflows/main.yml                | 87 ++++++++++---------
 1 file changed, 48 insertions(+), 39 deletions(-)

diff --git a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
index 12a0058..ce8fce0 100644
--- a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
+++ b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
@@ -23,38 +23,39 @@ jobs:
     steps:
       - uses: actions/checkout@v4
 
+      - name: Get number of CPU cores
+        uses: SimenB/github-actions-cpu-cores@v2
+
       - name: Install micromamba
         uses: mamba-org/setup-micromamba@v1
         with:
           environment-file: environment-dev.yml
-          environment-name: {{cookiecutter.conda_package_name}}
+
+      - name: Make build directory
+        run: mkdir build
 
       - name: Configure cmake
         shell: bash -l {0}
         run: |
-          mkdir -p bld
-          cd bld
           cmake .. \
            -DCMAKE_PREFIX_PATH=$CONDA_PREFIX \
            -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX
+        working-directory: build
 
       - name: Build
         shell: bash -l {0}
-        run: |
-          cd bld
-          make -j8
+        run: make -j${{ steps.cpu-cores.outputs.count }}
+        working-directory: build
 
       - name: Install
         shell: bash -l {0}
-        run: |
-          cd bld
-          make install
+        run: make install
+        working-directory: build
 
       - name: Test
         shell: bash -l {0}
-        run: |
-          cd test
-          pytest .  --reruns 5
+        run: pytest . --reruns 5
+        working-directory: test
 
   win:
     {% raw %}
@@ -63,7 +64,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        os: [ windows-latest]
+        os: [windows-latest]
 
     steps:
       - uses: actions/checkout@v4
@@ -75,30 +76,32 @@ jobs:
               powershell
               cmd.exe
           environment-file: environment-dev.yml
-          environment-name: {{cookiecutter.conda_package_name}}
+
+      - name: Make build directory
+        run: mkdir build
 
       - name: Configure cmake
         shell: cmd /C CALL {0}
         run: |
-          micromamba activate {{cookiecutter.conda_package_name}}
-          mkdir -p bld
-          cd bld
-          cmake .. -G "NMake Makefiles" -DCMAKE_BUILD_TYPE=Release -DXEUS_BUILD_TESTS=ON -DDEPENDENCY_SEARCH_PREFIX="%CONDA_PREFIX%\Library" -DCMAKE_PREFIX_PATH="%CONDA_PREFIX%\Library" -DCMAKE_INSTALL_PREFIX="%CONDA_PREFIX%" 
+          cmake .. -G "NMake Makefiles" ^
+            -DCMAKE_BUILD_TYPE=Release ^
+            -DXEUS_BUILD_TESTS=ON ^
+            -DDEPENDENCY_SEARCH_PREFIX="%CONDA_PREFIX%\Library" ^
+            -DCMAKE_PREFIX_PATH="%CONDA_PREFIX%\Library" ^
+            -DCMAKE_INSTALL_PREFIX="%CONDA_PREFIX%"
+        working-directory: build
 
       - name: Build and install
         shell: cmd /C CALL {0}
         run: |
-          micromamba activate {{cookiecutter.conda_package_name}}
-          cd bld
           set CL=/MP
           nmake install
+        working-directory: build
 
       - name: Test
         shell: cmd /C CALL {0}
-        run: |
-          micromamba activate {{cookiecutter.conda_package_name}}
-          cd test
-          pytest .  --reruns 5
+        run: pytest . --reruns 5
+        working-directory: test
 
   {% if cookiecutter.with_wasm == "yes" -%}
   emscripten_wasm_docker:
@@ -115,6 +118,9 @@ jobs:
     steps:
       - uses: actions/checkout@v4
 
+      - name: Get number of CPU cores
+        uses: SimenB/github-actions-cpu-cores@v2
+
       - name: Verify emscripten
         run: emcc -v
 
@@ -126,7 +132,7 @@ jobs:
           git checkout 0.7.2
           cd /opt/xtl/build
           emcmake cmake ../src/ -DCMAKE_INSTALL_PREFIX=/custom_sysroot
-          emmake make -j2 install
+          emmake make -j${{ steps.cpu-cores.outputs.count }} install
 
       - name: Install nlohmann-json
         run: |
@@ -136,7 +142,7 @@ jobs:
           git checkout v3.9.0
           cd /opt/nlohmannjson/build
           emcmake cmake ../src/  -DJSON_BuildTests=OFF -DCMAKE_INSTALL_PREFIX=/custom_sysroot
-          emmake make -j2 install
+          emmake make -j${{ steps.cpu-cores.outputs.count }} install
 
       - name: Install xeus
         run: |
@@ -152,8 +158,8 @@ jobs:
             -Dxtl_DIR=/custom_sysroot/share/cmake/xtl \
             -Dnlohmann_json_DIR=/custom_sysroot/lib/cmake/nlohmann_json
 
-          emmake make -j2
-          emmake make -j2 install
+          emmake make -j${{ steps.cpu-cores.outputs.count }}
+          emmake make -j${{ steps.cpu-cores.outputs.count }} install
 
       - name: Install xeus-lite
         run: |
@@ -166,14 +172,15 @@ jobs:
             -Dxtl_DIR=custom_sysroot/share/cmake/xtl \
             -Dnlohmann_json_DIR=/custom_sysroot/lib/cmake/nlohmann_json \
             -Dxeus_DIR=/custom_sysroot/lib/cmake/xeus
-          emmake make -j2
-          emmake make -j2 install
+          emmake make -j${{ steps.cpu-cores.outputs.count }}
+          emmake make -j${{ steps.cpu-cores.outputs.count }} install
+
+      - name: Make build directory
+        run: mkdir build
 
       - name: Configure cmake rendered project
         shell: bash -l {0}
         run: |
-          mkdir -p bld
-          cd bld
           emcmake cmake .. \
            -D{{cookiecutter.cmake_var_prefix}}_EMSCRIPTEN_WASM_BUILD=ON \
            -Dxtl_DIR=/custom_sysroot/share/cmake/xtl \
@@ -181,18 +188,17 @@ jobs:
            -Dxeus_DIR=/custom_sysroot/lib/cmake/xeus \
            -Dxeus-lite_DIR=/custom_sysroot/lib/cmake/xeus-lite \
            -DCMAKE_INSTALL_PREFIX=/custom_sysroot
+        working-directory: build
 
       - name: Build rendered project
         shell: bash -l {0}
-        run: |
-          cd bld
-          emmake make -j2
+        run: emmake make -j${{ steps.cpu-cores.outputs.count }}
+        working-directory: build
 
       - name: Install rendered project
         shell: bash -l {0}
-        run: |
-          cd bld
-          make install
+        run: make install
+        working-directory: build
 
   emscripten_wasm:
 
@@ -206,6 +212,9 @@ jobs:
     steps:
       - uses: actions/checkout@v4
 
+      - name: Get number of CPU cores
+        uses: SimenB/github-actions-cpu-cores@v2
+
       - name: Install micromamba
         uses: mamba-org/setup-micromamba@v1
         with:
@@ -243,6 +252,6 @@ jobs:
             -D{{cookiecutter.cmake_var_prefix}}_EMSCRIPTEN_WASM_BUILD=ON               \
             -DCMAKE_FIND_ROOT_PATH_MODE_PACKAGE=ON            \
             ..
-          make -j5
+          make -j${{ steps.cpu-cores.outputs.count }}
 
   {% endif %}

From 39ce2672c294762803b31afdb11d7d08845ba914 Mon Sep 17 00:00:00 2001
From: Isabel Paredes <isabel.paredes@quantstack.net>
Date: Wed, 3 Jan 2024 13:52:19 +0100
Subject: [PATCH 5/5] Add raw input

---
 .../.github/workflows/main.yml                     | 14 ++++++++++++++
 1 file changed, 14 insertions(+)

diff --git a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
index ce8fce0..2d924ea 100644
--- a/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
+++ b/{{cookiecutter.github_project_name}}/.github/workflows/main.yml
@@ -44,7 +44,9 @@ jobs:
 
       - name: Build
         shell: bash -l {0}
+        {% raw %}
         run: make -j${{ steps.cpu-cores.outputs.count }}
+        {% endraw %}
         working-directory: build
 
       - name: Install
@@ -125,6 +127,7 @@ jobs:
         run: emcc -v
 
       - name: Install xtl
+        {% raw %}
         run: |
           mkdir -p /opt/xtl/build
           git clone https://github.com/xtensor-stack/xtl.git  /opt/xtl/src
@@ -133,8 +136,10 @@ jobs:
           cd /opt/xtl/build
           emcmake cmake ../src/ -DCMAKE_INSTALL_PREFIX=/custom_sysroot
           emmake make -j${{ steps.cpu-cores.outputs.count }} install
+        {% endraw %}
 
       - name: Install nlohmann-json
+        {% raw %}
         run: |
           mkdir -p /opt/nlohmannjson/build
           git clone https://github.com/nlohmann/json.git  /opt/nlohmannjson/src
@@ -143,8 +148,10 @@ jobs:
           cd /opt/nlohmannjson/build
           emcmake cmake ../src/  -DJSON_BuildTests=OFF -DCMAKE_INSTALL_PREFIX=/custom_sysroot
           emmake make -j${{ steps.cpu-cores.outputs.count }} install
+        {% endraw %}
 
       - name: Install xeus
+        {% raw %}
         run: |
           mkdir -p /opt/xeus/build
           git clone https://github.com/jupyter-xeus/xeus.git  /opt/xeus/src
@@ -160,8 +167,10 @@ jobs:
 
           emmake make -j${{ steps.cpu-cores.outputs.count }}
           emmake make -j${{ steps.cpu-cores.outputs.count }} install
+        {% endraw %}
 
       - name: Install xeus-lite
+        {% raw %}
         run: |
           mkdir -p /opt/xeus-lite/build
           git clone https://github.com/jupyter-xeus/xeus-lite.git  /opt/xeus-lite/src
@@ -174,6 +183,7 @@ jobs:
             -Dxeus_DIR=/custom_sysroot/lib/cmake/xeus
           emmake make -j${{ steps.cpu-cores.outputs.count }}
           emmake make -j${{ steps.cpu-cores.outputs.count }} install
+        {% endraw %}
 
       - name: Make build directory
         run: mkdir build
@@ -192,7 +202,9 @@ jobs:
 
       - name: Build rendered project
         shell: bash -l {0}
+        {% raw %}
         run: emmake make -j${{ steps.cpu-cores.outputs.count }}
+        {% endraw %}
         working-directory: build
 
       - name: Install rendered project
@@ -252,6 +264,8 @@ jobs:
             -D{{cookiecutter.cmake_var_prefix}}_EMSCRIPTEN_WASM_BUILD=ON               \
             -DCMAKE_FIND_ROOT_PATH_MODE_PACKAGE=ON            \
             ..
+          {% raw %}
           make -j${{ steps.cpu-cores.outputs.count }}
+          {% endraw %}
 
   {% endif %}