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I got the data 'dat' that is used by netVisual_bubble to draw a picture .
In my understanding , for dat_prob and dat_pval :
dat_prob is all L-R probability between sources and target .
dat_pval is all L-R pvalue .between sources and target .
I am not sure whether my understanding is right ?
If I was right , for COL6A1_ITGA3_ITGB1 between group 5 and 10 , so its value in "dat_prob" is the same with _cellchat@net[["prob"]]["10","5","COL6A1_ITGA3_ITGB1"]_ ? so what happened ?
but I find it is not same ... this value is same with dat[["communication"]][["prob.original"]] .
And its value in dat_pval also has same situation, dat_pval is not same with cellchat@net[["pval"]]["10","5","COL6A1_ITGA3_ITGB1"] ? so what happened ? I not find pval.original ...
Expecting your reply !
Best
The text was updated successfully, but these errors were encountered:
Dear author,
Best
The text was updated successfully, but these errors were encountered: