Skip to content

Commit 14c7662

Browse files
authored
Update imperial.md
Updated docs to reflect restructuring for internal profiles
1 parent 38a05a6 commit 14c7662

File tree

1 file changed

+3
-1
lines changed

1 file changed

+3
-1
lines changed

docs/imperial.md

+3-1
Original file line numberDiff line numberDiff line change
@@ -8,9 +8,11 @@ Before running the pipeline you will need to load Nextflow using the environment
88

99
```bash
1010
## Load Nextflow and Singularity environment modules
11-
module load Nextflow
11+
module load anaconda3/personal
12+
conda install -c bioconda nextflow
1213
```
1314

1415
>NB: You will need an account to use the HPC cluster CX1 in order to run the pipeline. If in doubt contact IT.
1516
>NB: Nextflow will need to submit the jobs via the job scheduler to the HPC cluster and as such the commands above will have to be executed on one of the login nodes. If in doubt contact IT.
1617
>NB: To submit jobs to the Imperial College MEDBIO cluster, use `-profile imperial_mb` instead.
18+
>NB: You will need a restricted access account to use the HPC cluster MEDBIO.

0 commit comments

Comments
 (0)