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pyproject.toml
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pyproject.toml
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[tool.poetry]
name = "linc-convert"
version = "0.0.1"
description = "Data conversion tools for the LINC project."
authors = [
"Yael Balbastre <[email protected]>",
]
maintainers = [
"Yael Balbastre <[email protected]>",
]
license = "Apache-2.0"
readme = "README.md"
homepage = "https://connects.mgh.harvard.edu"
repository = "https://github.com/lincbrain/linc-convert"
documentation = "https://lincbrain.github.io/linc-convert"
keywords = ["python", "package", "template"]
classifiers = [
"Development Status :: 3 - Alpha",
"Programming Language :: Python :: 3.10",
"License :: OSI Approved :: Apache Software License",
"Operating System :: OS Independent"
]
packages = [{include = "linc_convert"}]
[tool.poetry.dependencies]
python = "^3.10"
cyclopts = "^2.0.0"
numpy = "*"
nibabel = "*"
zarr = "^2.0.0"
[tool.poetry.group.df.dependencies]
glymur = "*"
[tool.poetry.group.lsm.dependencies]
tifffile = "*"
[tool.poetry.group.dev]
optional = true
[tool.poetry.group.dev.dependencies]
pytest = "^8.1.1"
mypy = "^1.9.0"
pre-commit = "^3.7.0"
pytest-cov = "^5.0.0"
ruff = "^0.3.4"
[tool.poetry.group.docs]
optional = true
[tool.poetry.group.docs.dependencies]
pdoc = "^14.4.0"
[tool.pytest.ini_options]
pythonpath = [
"."
]
testpaths = [
"tests"
]
[tool.mypy]
ignore_missing_imports = true
[tool.ruff]
exclude = [
".bzr",
".direnv",
".eggs",
".git",
".git-rewrite",
".hg",
".mypy_cache",
".nox",
".pants.d",
".pytype",
".ruff_cache",
".svn",
".tox",
".venv",
"__pypackages__",
"_build",
"buck-out",
"build",
"dist",
"node_modules",
"venv"
]
line-length = 88
indent-width = 4
src = ["."]
target-version = "py310"
[tool.ruff.lint]
select = ["ANN", "D", "E", "F", "I"]
ignore = [
"ANN101", # self should not be annotated.
"ANN102" # cls should not be annotated.
]
fixable = ["ALL"]
unfixable = []
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"
[tool.ruff.lint.pydocstyle]
convention = "numpy"
[tool.ruff.lint.per-file-ignores]
"tests/**/*.py" = ["ANN", "D"]
[tool.poetry.scripts]
linc-convert = "linc_convert.cli:main"
[tool.ruff.format]
quote-style = "double"
indent-style = "space"
skip-magic-trailing-comma = false
line-ending = "auto"
[tool.poetry-dynamic-versioning]
enable = true
vcs = "git"
style = "pep440"
bump = true
pattern = "default-unprefixed"
[build-system]
requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"]
build-backend = "poetry_dynamic_versioning.backend"