From 99b688763510d4d2242ba7c1867ab6134efc0750 Mon Sep 17 00:00:00 2001 From: avahoffman Date: Tue, 27 Aug 2024 12:26:02 -0400 Subject: [PATCH] Final updates --- child/_child_galaxy_delete.Rmd | 20 ++++++++++---------- child/_child_galaxy_navigate.Rmd | 1 - child/_child_galaxy_start.Rmd | 6 ++++++ 3 files changed, 16 insertions(+), 11 deletions(-) diff --git a/child/_child_galaxy_delete.Rmd b/child/_child_galaxy_delete.Rmd index fe55a4ee..25e68f17 100644 --- a/child/_child_galaxy_delete.Rmd +++ b/child/_child_galaxy_delete.Rmd @@ -1,20 +1,20 @@ - Once you are done with your activity, you’ll need to shut down your Galaxy cloud environment. This frees up the cloud resources for others and minimizes computing cost. The following steps will delete your work, so make sure you are completely finished at this point. Otherwise, you will have to repeat your work from the previous steps. -Return to AnVIL, and find the Galaxy logo that shows your cloud environment is running. Click on this logo: +Return to AnVIL, and find the Galaxy logo that shows your cloud environment is running. Click on this logo. -```{r, echo=FALSE, fig.alt='Screenshot of the Workspace menu. The currently running Galaxy cloud environment logo on the top right of the page is highlighted.'} -ottrpal::include_slide("https://docs.google.com/presentation/d/182AOzMaiyrreinnsRX2VhH7YsVgvAp4xtIB_7Mzmk6I/edit#slide=id.gf243efded1_0_134") +```{r, echo=FALSE, fig.alt='Screenshot of the Workspace menu. The currently running Galaxy cloud environment logo on the right sidebar is highlighted.'} +ottrpal::include_slide("https://docs.google.com/presentation/d/1yYCg4cPVBMMDghT17B4XzROieqyMH99Ex9nMm_Scm9Q/edit#slide=id.ge20e585f11_0_248") ``` -Next, click on “DELETE ENVIRONMENT OPTIONS”: +Next, click on "Settings". Click on "Delete Environment". -```{r, echo=FALSE, fig.alt='Screenshot of the cloud environment pop out menu. The “DELETE ENVIRONMENT OPTIONS” link is highlighted.'} -ottrpal::include_slide("https://docs.google.com/presentation/d/182AOzMaiyrreinnsRX2VhH7YsVgvAp4xtIB_7Mzmk6I/edit#slide=id.gf243efded1_0_140") +```{r, echo=FALSE, fig.alt='Screenshot of the cloud environment pop out menu. The "Delete Environment" button is highlighted.'} +ottrpal::include_slide("https://docs.google.com/presentation/d/1yYCg4cPVBMMDghT17B4XzROieqyMH99Ex9nMm_Scm9Q/edit#slide=id.ge20e585f11_0_256") ``` -Finally, select “Delete everything, including persistent disk”. Make sure you are done with the activity and then click “DELETE”. +Finally, select "Delete everything, including persistent disk". Make sure you are done with the activity and then click "Delete". -```{r, echo=FALSE, fig.alt='Screenshot of the cloud environment pop out menu. The “Delete everything, including persistent disk” radio button has been checked and is highlighted. The “DELETE” button is highlighted.'} -ottrpal::include_slide("https://docs.google.com/presentation/d/182AOzMaiyrreinnsRX2VhH7YsVgvAp4xtIB_7Mzmk6I/edit#slide=id.gf243efded1_0_146") +```{r, echo=FALSE, fig.alt='Screenshot of the cloud environment pop out menu. The “Delete everything, including persistent disk” radio button has been checked and is highlighted. The “Delete” button is highlighted.'} +ottrpal::include_slide("https://docs.google.com/presentation/d/1UIfBMQcujMzyNTyIiMXQ6eU0DdWHmI9QUtseGylg6Ms/edit#slide=id.g117989bd49c_0_0") +``` diff --git a/child/_child_galaxy_navigate.Rmd b/child/_child_galaxy_navigate.Rmd index f6b18b87..8bc66bd8 100644 --- a/child/_child_galaxy_navigate.Rmd +++ b/child/_child_galaxy_navigate.Rmd @@ -12,4 +12,3 @@ ottrpal::include_slide("https://docs.google.com/presentation/d/182AOzMaiyrreinns ``` On the welcome page, there are links to tutorials. You may try these out on your own. If you want to try a new analysis this is a good place to start. - diff --git a/child/_child_galaxy_start.Rmd b/child/_child_galaxy_start.Rmd index 580de5b0..d7a81cac 100644 --- a/child/_child_galaxy_start.Rmd +++ b/child/_child_galaxy_start.Rmd @@ -11,3 +11,9 @@ Under Galaxy, click on “Create new Environment”. Click on “Next” and “ ```{r, echo=FALSE, fig.alt='The button that starts a cloud environment for Galaxy has been highlighted,'} ottrpal::include_slide("https://docs.google.com/presentation/d/1yYCg4cPVBMMDghT17B4XzROieqyMH99Ex9nMm_Scm9Q/edit#slide=id.ge1182914a6_0_36") ``` + +Click on "Open Galaxy" when the environment is ready. + +```{r, echo=FALSE, fig.alt='The Open Galaxy button is highlighted in the ready environment popup.'} +ottrpal::include_slide("https://docs.google.com/presentation/d/1yYCg4cPVBMMDghT17B4XzROieqyMH99Ex9nMm_Scm9Q/edit#slide=id.ge1182914a6_0_57") +```