Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Fast implant segmentation #6

Closed
jamesavery opened this issue May 4, 2022 · 2 comments
Closed

Fast implant segmentation #6

jamesavery opened this issue May 4, 2022 · 2 comments

Comments

@jamesavery
Copy link
Owner

The implant segmentation is currently written in Python and is very slow. But in fact, it should be blazingly fast. So let's make that happen.
jamesavery pushed a commit that referenced this issue May 19, 2022
CC implant segmentation
a92a4d0 
Simple implementation of largest-connected-component implant segmenting. #6

TODO: Hierarchical CC to get to full resolution.
@carljohnsen
Copy link
Collaborator

Not really fast (relative to pure in-memory), but the #37 implementation provides the logic to do so, albeit currently using disk as a medium. This should be rewritten to be able to run in-memory, as the benefits of the out-of-core on-disk implementation should translate well.

@carljohnsen
Copy link
Collaborator

Fixed by recent additions to #37

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@jamesavery @carljohnsen