Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Need a fine-resolution bone_region mask #24

Closed
jamesavery opened this issue Jun 26, 2022 · 1 comment
Closed

Need a fine-resolution bone_region mask #24

jamesavery opened this issue Jun 26, 2022 · 1 comment

Comments

@jamesavery
Copy link
Owner

The coarse resolution bone_region mask was OK for gathering the statistics (2D-histogramming and optimizing the probability models).

However, it is unsufficiently accurate near the implant. For two reasons:

  1. The coarse voxels make for an inaccurate interface to the implant.
  2. The morphological closing (for including blood vessels in the region) also closed off the valleys from the implant threads: important regions for e.g. bone-to-implant contact that now can't be properly segmented!

Further: There are problems near the cylinder edge as well.

In conclusion: We need a better bone_region mask with as high resolution and accuracy as possible near the implant threads, and which covers the entire bone region.

carljohnsen added a commit that referenced this issue May 14, 2024
carljohnsen added a commit that referenced this issue May 15, 2024
carljohnsen added a commit that referenced this issue May 15, 2024
carljohnsen added a commit that referenced this issue May 15, 2024
carljohnsen added a commit that referenced this issue May 15, 2024
carljohnsen added a commit that referenced this issue May 21, 2024
carljohnsen added a commit that referenced this issue May 22, 2024
carljohnsen added a commit that referenced this issue May 24, 2024
…hell and solid implant masks. Still not sufficient for scale <= 2
carljohnsen added a commit that referenced this issue May 28, 2024
carljohnsen added a commit that referenced this issue May 29, 2024
…sing step to make a closer fit to the implant
carljohnsen added a commit that referenced this issue May 29, 2024
…acked when nx%32==0, and calling the regular otherwise
@carljohnsen
Copy link
Collaborator

#37 Allowed for 0750 to run at 1x within reasonable time, thus producing a 1x mask. Some of the internal parameters (e.g. implant dilation) should however still be tuned in the future, to provide the tightest possible fits.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants