Coordination of Protocol Cleanup

[lzpap]

Pending refactors/breaking changes

• feat(node): Remove multiple versions of types #3499
• feat: remove zklogin_supported_providers parameter #3579
• chore(consensus): cleanup throughput_aware_consensus_submission #3576
• chore(core-node)!: Cleanup Narwhal related fields in IOTA Framework codebase (Move and Rust) #3151
• remove(iota-core): Remove multiple versions for PendingCheckpoint and AuthorityEpochTables related to randomness generation changes #3349
• refactor(iota-core): Remove old versions: CheckpointResponse and CheckpointRequest. #3179
• refactor(iota-types/iota-system-state): Remove multiple versions from the iota-system-state types #3168
• remove(node): remove advance_to_highest_supported_protocol_version feature flag #3601
• refactor(iota-types): rename TransactionEffectsV2 to TransactionEffectsV1 #3662
• refactor(core-node): rename IotaGasStatusV2 to be IotaGasStatusV1 #3660
• refactor(core-node): rename UIDTraversalV2/UIDTraversalV1 version #3658
• refactor(core-node): rename ExecutionResultsV2 to ExecutionResultsV1 #3650
• chore(consensus): Remove mysticeti_num_leaders_per_round param  #3661
• feat: remove deepbook #3654
• [framework, types, e2e-tests] Remove multiple versions of the same types #1083 sub issues
• remove(node): remove enable_group_ops_native_functions feature flag #3667
• feat(node): Remove multiple versions of types (Part 2) #3672
• feat!: remove TransactionEffectsV1 and rename V2 to V1 iota-rust-sdk#12
• fix(iota-light-client)regenerate checkpoints after transaction effects v1 changes #3723
• Replace handle_certificate_v2 and handle_certificate_v3 with a single method #3504

Problem

All of these break system objects/fields and therefore break the openrpc.json plus qraphql tests and the TS SDK.

What are the types that we can't change once we launch the testnet?

• anyhting that we can't change with a protocol upgrade -

Are we fixing the CI for each change separately or are fine with breaking the CI and doing it once all of the mare merged?

Moving Forward

• infra team will wait with fixing the tests being broken by the above PRs until all of them are merged.
• tooling team will follow the infra team
• The outstanding PRs are worked on and merged asap, while the CI is not being fixed.
• @kodemartin writes a guide on how to update the graphql baselines together with the schemas. All PRs expect to have these changes included. -> https://iotafoundation.atlassian.net/wiki/spaces/IF/pages/2287599647/Monorepo+Management#Updates-on-GraphQL-crates
• The CI shall be kept green with each PR except the TS releated e2e tests.

[alexsporn]

All changes are merged. We are re-generating all snapshots and test files together with this PR:
#3740