From c2ea2b565cad0ee5803f9593bdcab23d271561fe Mon Sep 17 00:00:00 2001 From: krlmlr Date: Sat, 30 Nov 2024 20:35:40 +0000 Subject: [PATCH] Built site for igraph@2.1.1.9905: f5dc296 --- articles/igraph.html | 30 +- articles/igraph_ES.html | 30 +- pkgdown.yml | 2 +- reference/E.html | 4 +- reference/V.html | 4 +- reference/add_edges.html | 2 +- reference/add_vertices.html | 6 +- reference/adjacent_vertices.html | 4 +- reference/all_simple_paths.html | 12 +- reference/are_adjacent.html | 8 +- reference/articulation_points.html | 4 +- reference/as.igraph.html | 4 +- reference/as_adj_list.html | 40 +- reference/as_directed.html | 16 +- reference/as_graphnel.html | 8 +- reference/automorphism_group.html | 4 +- reference/bfs.html | 10 +- reference/bipartite_projection.html | 8 +- reference/c.igraph.es.html | 2 +- reference/c.igraph.vs.html | 2 +- reference/cliques.html | 358 ++++++++-------- reference/cohesive_blocks.html | 10 +- reference/complementer.html | 8 +- reference/components.html | 4 +- reference/compose.html | 4 +- reference/contract.html | 4 +- reference/delete_edges.html | 12 +- reference/delete_vertices.html | 12 +- reference/dfs.html | 6 +- reference/diameter.html | 4 +- reference/difference.igraph.es.html | 2 +- reference/difference.igraph.html | 2 +- reference/difference.igraph.vs.html | 2 +- reference/disjoint_union.html | 4 +- reference/distances.html | 36 +- reference/edge.html | 2 +- reference/edge_attr-set.html | 4 +- reference/edge_attr.html | 4 +- reference/ego.html | 60 +-- reference/feedback_arc_set.html | 4 +- reference/get_edge_ids.html | 4 +- reference/girth.html | 6 +- reference/graph_.html | 8 +- reference/graph_attr-set.html | 4 +- reference/graph_center.html | 10 +- reference/graph_from_adjacency_matrix.html | 2 +- reference/graph_from_atlas.html | 8 +- reference/graph_from_biadjacency_matrix.html | 4 +- reference/graph_from_data_frame.html | 4 +- reference/graph_from_edgelist.html | 8 +- reference/graph_from_graphnel.html | 8 +- reference/graph_from_literal.html | 24 +- reference/graph_id.html | 8 +- reference/has_eulerian_path.html | 4 +- reference/igraph-attribute-combination.html | 20 +- reference/igraph-es-indexing.html | 12 +- reference/igraph-es-indexing2.html | 6 +- reference/igraph-vs-indexing.html | 16 +- reference/igraph-vs-indexing2.html | 8 +- reference/incident.html | 4 +- reference/incident_edges.html | 4 +- reference/intersection.igraph.es.html | 2 +- reference/intersection.igraph.html | 4 +- reference/intersection.igraph.vs.html | 2 +- reference/is_chordal.html | 4 +- reference/is_forest.html | 2 +- reference/is_named.html | 2 +- reference/is_separator.html | 4 +- reference/is_tree.html | 2 +- reference/is_weighted.html | 4 +- reference/ivs.html | 40 +- reference/keeping_degseq.html | 4 +- reference/make_bipartite_graph.html | 4 +- reference/make_de_bruijn_graph.html | 8 +- reference/make_empty_graph.html | 8 +- reference/make_full_citation_graph.html | 2 +- reference/make_full_graph.html | 6 +- reference/make_graph.html | 8 +- reference/make_kautz_graph.html | 8 +- reference/make_lattice.html | 8 +- reference/make_line_graph.html | 12 +- reference/make_ring.html | 8 +- reference/make_star.html | 8 +- reference/make_tree.html | 8 +- reference/matching.html | 8 +- reference/max_cardinality.html | 4 +- reference/max_flow.html | 6 +- reference/min_cut.html | 12 +- reference/min_separators.html | 54 +-- reference/min_st_separators.html | 68 +-- reference/neighbors.html | 2 +- reference/path.html | 4 +- reference/print.igraph.es.html | 14 +- reference/print.igraph.html | 6 +- reference/print.igraph.vs.html | 12 +- reference/rev.igraph.es.html | 4 +- reference/rev.igraph.vs.html | 2 +- reference/reverse_edges.html | 4 +- reference/rewire.html | 4 +- reference/sample_bipartite.html | 16 +- reference/sample_correlated_gnp.html | 8 +- reference/sample_correlated_gnp_pair.html | 8 +- reference/sample_dot_product.html | 8 +- reference/sample_hierarchical_sbm.html | 4 +- reference/sample_sbm.html | 4 +- reference/set_edge_attr.html | 4 +- reference/set_graph_attr.html | 4 +- reference/set_vertex_attr.html | 4 +- reference/simplified.html | 8 +- reference/st_cuts.html | 60 +-- reference/st_min_cuts.html | 12 +- reference/subcomponent.html | 6 +- reference/subgraph_isomorphic.html | 50 +-- reference/topo_sort.html | 2 +- reference/union.igraph.es.html | 2 +- reference/union.igraph.html | 4 +- reference/union.igraph.vs.html | 2 +- reference/unique.igraph.es.html | 4 +- reference/unique.igraph.vs.html | 4 +- reference/vertex.html | 4 +- reference/vertex_attr-set.html | 4 +- reference/weighted_cliques.html | 414 +++++++++---------- reference/with_graph_.html | 4 +- reference/without_attr.html | 8 +- reference/without_loops.html | 8 +- reference/without_multiples.html | 8 +- search.json | 2 +- 127 files changed, 971 insertions(+), 971 deletions(-) diff --git a/articles/igraph.html b/articles/igraph.html index fb1a3a81ba..c2bbef9ccd 100644 --- a/articles/igraph.html +++ b/articles/igraph.html @@ -145,9 +145,9 @@

Creating a graphWe can print the graph to get a summary of its nodes and edges:

 g
-
## IGRAPH f05a066 UN-- 10 2 -- 
+
## IGRAPH 870b15a UN-- 10 2 -- 
 ## + attr: name (v/c)
-## + edges from f05a066 (vertex names):
+## + edges from 870b15a (vertex names):
 ## [1] 1--2 1--5

This means: Undirected Named graph with 10 vertices and 2 edges, with the @@ -159,7 +159,7 @@

Creating a graph -
## IGRAPH f05a066 UN-- 10 2 -- 
+
## IGRAPH 870b15a UN-- 10 2 -- 
 ## + attr: name (v/c)

The same function make_graph() can create some notable graphs by just specifying their name. For example you can create the @@ -240,9 +240,9 @@

Adding/deleting vertices and edges add_vertices(3) %>% add_edges(edges = c(38, 39, 39, 40, 40, 38, 40, 37)) g

-
## IGRAPH 856960b U--- 40 86 -- Zachary
+
## IGRAPH 28db48e U--- 40 86 -- Zachary
 ## + attr: name (g/c)
-## + edges from 856960b:
+## + edges from 28db48e:
 ##  [1]  1-- 2  1-- 3  1-- 4  1-- 5  1-- 6  1-- 7  1-- 8  1-- 9  1--11  1--12
 ## [11]  1--13  1--14  1--18  1--20  1--22  1--32  2-- 3  2-- 4  2-- 8  2--14
 ## [21]  2--18  2--20  2--22  2--31  3-- 4  3-- 8  3--28  3--29  3--33  3--10
@@ -334,7 +334,7 @@ 

Constructing graphs
 graph1 <- make_tree(127, 2, mode = "undirected")
 summary(graph1)
-
## IGRAPH 8962743 U--- 127 126 -- Tree
+
## IGRAPH e73b002 U--- 127 126 -- Tree
 ## + attr: name (g/c), children (g/n), mode (g/c)

This generates a regular tree graph with 127 vertices, each vertex having two children. No matter how many times you call @@ -351,7 +351,7 @@

Constructing graphs
 graph1 <- sample_grg(100, 0.2)
 summary(graph1)
-
## IGRAPH 086681d U--- 100 524 -- Geometric random graph
+
## IGRAPH 04cbf8c U--- 100 524 -- Geometric random graph
 ## + attr: name (g/c), radius (g/n), torus (g/l)

This generates a geometric random graph: n points are chosen randomly and uniformly inside the unit square and pairs of points closer @@ -406,7 +406,7 @@

Setting and retrieving attributesV(g)$gender <- c("f", "m", "f", "m", "m", "f", "m") E(g)$is_formal <- c(FALSE, FALSE, TRUE, TRUE, TRUE, FALSE, TRUE, FALSE, FALSE) summary(g)

-
## IGRAPH 51df074 UN-- 7 9 -- 
+
## IGRAPH 95906ec UN-- 7 9 -- 
 ## + attr: name (v/c), age (v/n), gender (v/c), is_formal (e/l)

V() and E() are the standard way to obtain a sequence of all vertices and edges, respectively. This assigns an @@ -450,7 +450,7 @@

Setting and retrieving attributes
 V(g)$name[1:3] <- c("Alejandra", "Bruno", "Carmina")
 V(g)
-
## + 7/7 vertices, named, from 51df074:
+
## + 7/7 vertices, named, from 95906ec:
 ## [1] Alejandra Bruno     Carmina   Moshe     Nang      Samira    Ibrahim

To delete attributes:

@@ -568,12 +568,12 @@ 

Selecting vertices
 seq <- V(graph)[2, 3, 7]
 seq

-
## + 3/10 vertices, from b290d0d:
+
## + 3/10 vertices, from 0d00294:
 ## [1] 2 3 7
 seq <- seq[1, 3] # filtering an existing vertex set
 seq
-
## + 2/10 vertices, from b290d0d:
+
## + 2/10 vertices, from 0d00294:
 ## [1] 2 7

Selecting a vertex that does not exist results in an error:

@@ -669,12 +669,12 @@ 

Selecting edges
 E(g)[.from(3)]
-
## + 4/9 edges from 51df074 (vertex names):
+
## + 4/9 edges from 95906ec (vertex names):
 ## [1] Alejandra--Carmina Carmina  --Moshe   Carmina  --Nang    Carmina  --Samira

Of course it also works with vertex names:

 E(g)[.from("Carmina")]
-
## + 4/9 edges from 51df074 (vertex names):
+
## + 4/9 edges from 95906ec (vertex names):
 ## [1] Alejandra--Carmina Carmina  --Moshe   Carmina  --Nang    Carmina  --Samira

Using .to() filters edge sequences based on the target vertices. This is different from .from() if the graph is @@ -689,7 +689,7 @@

Selecting edges
 E(g)[3:5 %--% 5:6]
-
## + 3/9 edges from 51df074 (vertex names):
+
## + 3/9 edges from 95906ec (vertex names):
 ## [1] Carmina--Nang   Carmina--Samira Nang   --Samira

To make the %--% operator work with names, you can build string vectors containing the names and then use these vectors as @@ -708,7 +708,7 @@

Selecting edges## [1] "Alejandra" "Carmina" "Samira"

 E(g)[men %--% women]
-
## + 5/9 edges from 51df074 (vertex names):
+
## + 5/9 edges from 95906ec (vertex names):
 ## [1] Alejandra--Bruno  Alejandra--Moshe  Carmina  --Moshe  Carmina  --Nang  
 ## [5] Nang     --Samira

diff --git a/articles/igraph_ES.html b/articles/igraph_ES.html index 169dd1f1ab..49275aa33e 100644 --- a/articles/igraph_ES.html +++ b/articles/igraph_ES.html @@ -149,9 +149,9 @@

Crear un grafo
 g
-
## IGRAPH 21087e5 UN-- 10 2 -- 
+
## IGRAPH c761b85 UN-- 10 2 -- 
 ## + attr: name (v/c)
-## + edges from 21087e5 (vertex names):
+## + edges from c761b85 (vertex names):
 ## [1] 1--2 1--5

Esto significa: grafo no dirigido (Undirected) con 10 vértices y 2 aristas, que se @@ -163,7 +163,7 @@

Crear un grafo -
## IGRAPH 21087e5 UN-- 10 2 -- 
+
## IGRAPH c761b85 UN-- 10 2 -- 
 ## + attr: name (v/c)

También make_graph() puede crear algunos grafos destacados con sólo especificar su nombre. Por ejemplo, puedes generar @@ -250,9 +250,9 @@

Añadir y borrar vértices y arist add_vertices(3) %>% add_edges(edges = c(38, 39, 39, 40, 40, 38, 40, 37)) g

-
## IGRAPH 160be22 U--- 40 86 -- Zachary
+
## IGRAPH 5c0bc40 U--- 40 86 -- Zachary
 ## + attr: name (g/c)
-## + edges from 160be22:
+## + edges from 5c0bc40:
 ##  [1]  1-- 2  1-- 3  1-- 4  1-- 5  1-- 6  1-- 7  1-- 8  1-- 9  1--11  1--12
 ## [11]  1--13  1--14  1--18  1--20  1--22  1--32  2-- 3  2-- 4  2-- 8  2--14
 ## [21]  2--18  2--20  2--22  2--31  3-- 4  3-- 8  3--28  3--29  3--33  3--10
@@ -348,7 +348,7 @@ 

Construcción de grafos
 graph1 <- make_tree(127, 2, mode = "undirected")
 summary(g)
-
## IGRAPH c99ba3e U--- 5 3 -- Ring graph
+
## IGRAPH 570678a U--- 5 3 -- Ring graph
 ## + attr: name (g/c), mutual (g/l), circular (g/l)

Esto genera un grafo regular en forma de árbol con 127 vértices, cada vértice con dos hijos. No importa cuántas veces llames a @@ -365,7 +365,7 @@

Construcción de grafos
 graph1 <- sample_grg(100, 0.2)
 summary(graph1)
-
## IGRAPH 6dc4ef0 U--- 100 524 -- Geometric random graph
+
## IGRAPH 2db3e97 U--- 100 524 -- Geometric random graph
 ## + attr: name (g/c), radius (g/n), torus (g/l)

Esto genera un grafo geométrico aleatorio: Se eligen n puntos de forma aleatoria y uniforme dentro del espacio métrico, y los @@ -423,7 +423,7 @@

Establecer y recuperar atributosV(g)$gender <- c("f", "m", "f", "m", "m", "f", "m") E(g)$is_formal <- c(FALSE, FALSE, TRUE, TRUE, TRUE, FALSE, TRUE, FALSE, FALSE) summary(g)

-
## IGRAPH 68f945b UN-- 7 9 -- 
+
## IGRAPH cabfb64 UN-- 7 9 -- 
 ## + attr: name (v/c), age (v/n), gender (v/c), is_formal (e/l)

V y E son la forma estándar de obtener una secuencia de todos los vértices y aristas respectivamente. Esto asigna @@ -471,7 +471,7 @@

Establecer y recuperar atributos
 V(g)$name[1:3] <- c("Alejandra", "Bruno", "Carmina")
 V(g)
-
## + 7/7 vertices, named, from 68f945b:
+
## + 7/7 vertices, named, from cabfb64:
 ## [1] Alejandra Bruno     Carmina   Moshe     Nang      Samira    Ibrahim

Para eliminar atributos:

@@ -592,12 +592,12 @@ 

Selección de vértices
 seq <- V(graph)[2, 3, 7]
 seq

-
## + 3/10 vertices, from 5aefe93:
+
## + 3/10 vertices, from b59487a:
 ## [1] 2 3 7
 seq <- seq[1, 3]    # filtrar un conjunto de vértices existente
 seq
-
## + 2/10 vertices, from 5aefe93:
+
## + 2/10 vertices, from b59487a:
 ## [1] 2 7

Al seleccionar un vértice que no existe se produce un error:

@@ -691,12 +691,12 @@ 

Selección de aristas
 E(g)[.from(3)]
-
## + 4/9 edges from 68f945b (vertex names):
+
## + 4/9 edges from cabfb64 (vertex names):
 ## [1] Alejandra--Carmina Carmina  --Moshe   Carmina  --Nang    Carmina  --Samira

Por supuesto, también funciona con nombres de vértices:

 E(g)[.from("Carmina")]
-
## + 4/9 edges from 68f945b (vertex names):
+
## + 4/9 edges from cabfb64 (vertex names):
 ## [1] Alejandra--Carmina Carmina  --Moshe   Carmina  --Nang    Carmina  --Samira

Al usar .to(), se filtran la serie de aristas en función de los vértices de destino o diana. Esto es diferente de @@ -713,7 +713,7 @@

Selección de aristas
 E(g) [ 3:5 %--% 5:6 ]
-
## + 3/9 edges from 68f945b (vertex names):
+
## + 3/9 edges from cabfb64 (vertex names):
 ## [1] Carmina--Nang   Carmina--Samira Nang   --Samira

Para que el operador %--% funcione con nombres, puedes construir vectores de caracteres que contengan los nombres y luego @@ -733,7 +733,7 @@

Selección de aristas## [1] "Alejandra" "Carmina" "Samira"

 E(g)[men %--% women]
-
## + 5/9 edges from 68f945b (vertex names):
+
## + 5/9 edges from cabfb64 (vertex names):
 ## [1] Alejandra--Bruno  Alejandra--Moshe  Carmina  --Moshe  Carmina  --Nang  
 ## [5] Nang     --Samira

diff --git a/pkgdown.yml b/pkgdown.yml index 85e5cb8906..04fdeb6f7c 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -6,7 +6,7 @@ articles: igraph_ES: igraph_ES.html igraph: igraph.html articles/installation-troubleshooting: installation-troubleshooting.html -last_built: 2024-11-30T18:18Z +last_built: 2024-11-30T20:32Z urls: reference: https://r.igraph.org/reference article: https://r.igraph.org/articles diff --git a/reference/E.html b/reference/E.html index fd1ea508c7..f6c1cdde19 100644 --- a/reference/E.html +++ b/reference/E.html @@ -140,14 +140,14 @@

Examples
# Edges of an unnamed graph
 g <- make_ring(10)
 E(g)
-#> + 10/10 edges from bac2d7c:
+#> + 10/10 edges from 11d42ce:
 #>  [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 9--10 1--10
 
 # Edges of a named graph
 g2 <- make_ring(10) %>%
   set_vertex_attr("name", value = letters[1:10])
 E(g2)
-#> + 10/10 edges from dae5a1c (vertex names):
+#> + 10/10 edges from c7f503a (vertex names):
 #>  [1] a--b b--c c--d d--e e--f f--g g--h h--i i--j a--j
 
diff --git a/reference/V.html b/reference/V.html index 91c0218393..5172bbf561 100644 --- a/reference/V.html +++ b/reference/V.html @@ -120,14 +120,14 @@

Examples
# Vertex ids of an unnamed graph
 g <- make_ring(10)
 V(g)
-#> + 10/10 vertices, from a2dbad0:
+#> + 10/10 vertices, from b5a4d5c:
 #>  [1]  1  2  3  4  5  6  7  8  9 10
 
 # Vertex ids of a named graph
 g2 <- make_ring(10) %>%
   set_vertex_attr("name", value = letters[1:10])
 V(g2)
-#> + 10/10 vertices, named, from 6f1f0b0:
+#> + 10/10 vertices, named, from 337108a:
 #>  [1] a b c d e f g h i j
 
diff --git a/reference/add_edges.html b/reference/add_edges.html index ef2df34d1a..1ec833713d 100644 --- a/reference/add_edges.html +++ b/reference/add_edges.html @@ -135,7 +135,7 @@

Examples set_edge_attr("color", value = "red") %>% add_edges(c(5, 1), color = "green") E(g)[[]] -#> + 5/5 edges from 8c5d27f: +#> + 5/5 edges from c3ee4e9: #> tail head tid hid color #> 1 1 2 1 2 red #> 2 2 3 2 3 red diff --git a/reference/add_vertices.html b/reference/add_vertices.html index 3d82705536..9c0ad66556 100644 --- a/reference/add_vertices.html +++ b/reference/add_vertices.html @@ -126,12 +126,12 @@

Examples 4, 5 )) g -#> IGRAPH 3a534df D--- 5 4 -- +#> IGRAPH 6248d14 D--- 5 4 -- #> + attr: color (v/c) -#> + edges from 3a534df: +#> + edges from 6248d14: #> [1] 1->2 2->3 3->4 4->5 V(g)[[]] -#> + 5/5 vertices, from 3a534df: +#> + 5/5 vertices, from 6248d14: #> color #> 1 red #> 2 red diff --git a/reference/adjacent_vertices.html b/reference/adjacent_vertices.html index be78b40a26..0d576540f3 100644 --- a/reference/adjacent_vertices.html +++ b/reference/adjacent_vertices.html @@ -100,11 +100,11 @@

Examples
g <- make_graph("Zachary")
 adjacent_vertices(g, c(1, 34))
 #> [[1]]
-#> + 16/34 vertices, from c5d70e9:
+#> + 16/34 vertices, from 0371e26:
 #>  [1]  2  3  4  5  6  7  8  9 11 12 13 14 18 20 22 32
 #> 
 #> [[2]]
-#> + 17/34 vertices, from c5d70e9:
+#> + 17/34 vertices, from 0371e26:
 #>  [1]  9 10 14 15 16 19 20 21 23 24 27 28 29 30 31 32 33
 #> 
 
diff --git a/reference/all_simple_paths.html b/reference/all_simple_paths.html index 6d7e599510..a2ea24f2f7 100644 --- a/reference/all_simple_paths.html +++ b/reference/all_simple_paths.html @@ -120,28 +120,28 @@

Examplesg <- make_ring(10) all_simple_paths(g, 1, 5) #> [[1]] -#> + 5/10 vertices, from ea4921c: +#> + 5/10 vertices, from 3f40f0f: #> [1] 1 2 3 4 5 #> #> [[2]] -#> + 7/10 vertices, from ea4921c: +#> + 7/10 vertices, from 3f40f0f: #> [1] 1 10 9 8 7 6 5 #> all_simple_paths(g, 1, c(3, 5)) #> [[1]] -#> + 3/10 vertices, from ea4921c: +#> + 3/10 vertices, from 3f40f0f: #> [1] 1 2 3 #> #> [[2]] -#> + 5/10 vertices, from ea4921c: +#> + 5/10 vertices, from 3f40f0f: #> [1] 1 2 3 4 5 #> #> [[3]] -#> + 7/10 vertices, from ea4921c: +#> + 7/10 vertices, from 3f40f0f: #> [1] 1 10 9 8 7 6 5 #> #> [[4]] -#> + 9/10 vertices, from ea4921c: +#> + 9/10 vertices, from 3f40f0f: #> [1] 1 10 9 8 7 6 5 4 3 #> diff --git a/reference/are_adjacent.html b/reference/are_adjacent.html index 7f7fa93bd5..fd55e21ac0 100644 --- a/reference/are_adjacent.html +++ b/reference/are_adjacent.html @@ -101,9 +101,9 @@

Examples

ug <- make_ring(10)
 ug
-#> IGRAPH 1b181c6 U--- 10 10 -- Ring graph
+#> IGRAPH 63d5661 U--- 10 10 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l)
-#> + edges from 1b181c6:
+#> + edges from 63d5661:
 #>  [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 9--10 1--10
 are_adjacent(ug, 1, 2)
 #> [1] TRUE
@@ -112,9 +112,9 @@ 

Examples dg <- make_ring(10, directed = TRUE) dg -#> IGRAPH 8c33890 D--- 10 10 -- Ring graph +#> IGRAPH 9ed7b98 D--- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l) -#> + edges from 8c33890: +#> + edges from 9ed7b98: #> [1] 1-> 2 2-> 3 3-> 4 4-> 5 5-> 6 6-> 7 7-> 8 8-> 9 9->10 10-> 1 are_adjacent(ug, 1, 2) #> [1] TRUE diff --git a/reference/articulation_points.html b/reference/articulation_points.html index 38225348f7..0fd8b3e95f 100644 --- a/reference/articulation_points.html +++ b/reference/articulation_points.html @@ -106,12 +106,12 @@

Examplesclu <- components(g)$membership g <- add_edges(g, c(match(1, clu), match(2, clu))) articulation_points(g) -#> + 2/10 vertices, from 88d04bc: +#> + 2/10 vertices, from 70960c8: #> [1] 6 1 g <- make_graph("krackhardt_kite") bridges(g) -#> + 2/18 edges from 8540041: +#> + 2/18 edges from f3006f6: #> [1] 9--10 8-- 9

diff --git a/reference/as.igraph.html b/reference/as.igraph.html index fda048f6c2..5f64805a51 100644 --- a/reference/as.igraph.html +++ b/reference/as.igraph.html @@ -86,9 +86,9 @@

Examplesg <- make_full_graph(5) + make_full_graph(5) hrg <- fit_hrg(g) as.igraph(hrg) -#> IGRAPH c973d92 DN-- 19 18 -- Fitted HRG +#> IGRAPH 8920ba2 DN-- 19 18 -- Fitted HRG #> + attr: name (g/c), name (v/c), prob (v/n) -#> + edges from c973d92 (vertex names): +#> + edges from 8920ba2 (vertex names): #> [1] g1->g4 g2->1 g3->2 g4->g6 g5->8 g6->g2 g7->g9 g8->6 g9->7 g1->g8 #> [11] g2->g3 g3->4 g4->3 g5->9 g6->5 g7->g5 g8->g7 g9->10 diff --git a/reference/as_adj_list.html b/reference/as_adj_list.html index dd00a58a87..45bcff50a5 100644 --- a/reference/as_adj_list.html +++ b/reference/as_adj_list.html @@ -136,84 +136,84 @@

Examplesg <- make_ring(10) as_adj_list(g) #> [[1]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 2 10 #> #> [[2]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 1 3 #> #> [[3]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 2 4 #> #> [[4]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 3 5 #> #> [[5]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 4 6 #> #> [[6]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 5 7 #> #> [[7]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 6 8 #> #> [[8]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 7 9 #> #> [[9]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 8 10 #> #> [[10]] -#> + 2/10 vertices, from af82f51: +#> + 2/10 vertices, from 414fb98: #> [1] 1 9 #> as_adj_edge_list(g) #> [[1]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 1-- 2 1--10 #> #> [[2]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 1--2 2--3 #> #> [[3]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 2--3 3--4 #> #> [[4]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 3--4 4--5 #> #> [[5]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 4--5 5--6 #> #> [[6]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 5--6 6--7 #> #> [[7]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 6--7 7--8 #> #> [[8]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 7--8 8--9 #> #> [[9]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 8-- 9 9--10 #> #> [[10]] -#> + 2/10 edges from af82f51: +#> + 2/10 edges from 414fb98: #> [1] 1--10 9--10 #> diff --git a/reference/as_directed.html b/reference/as_directed.html index 8e9d1ce6bd..b1ca287e28 100644 --- a/reference/as_directed.html +++ b/reference/as_directed.html @@ -163,16 +163,16 @@

Examples

 g <- make_ring(10)
 as_directed(g, "mutual")
-#> IGRAPH 669eebf D--- 10 20 -- Ring graph
+#> IGRAPH 37dc62e D--- 10 20 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l)
-#> + edges from 669eebf:
+#> + edges from 37dc62e:
 #>  [1]  1-> 2  2-> 3  3-> 4  4-> 5  5-> 6  6-> 7  7-> 8  8-> 9  9->10  1->10
 #> [11]  2-> 1  3-> 2  4-> 3  5-> 4  6-> 5  7-> 6  8-> 7  9-> 8 10-> 9 10-> 1
 g2 <- make_star(10)
 as_undirected(g)
-#> IGRAPH 1b99a6e U--- 10 10 -- Ring graph
+#> IGRAPH 02fc552 U--- 10 10 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l)
-#> + edges from 1b99a6e:
+#> + edges from 02fc552:
 #>  [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 9--10 1--10
 
 # Combining edge attributes
@@ -180,9 +180,9 @@ 

ExamplesE(g3)$weight <- seq_len(ecount(g3)) ug3 <- as_undirected(g3) print(ug3, e = TRUE) -#> IGRAPH f7376b7 U-W- 10 10 -- Ring graph +#> IGRAPH 5787b8b U-W- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), weight (e/n) -#> + edges from f7376b7: +#> + edges from 5787b8b: #> [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 1--10 9--10 if (FALSE) { # rlang::is_interactive() x11(width = 10, height = 5) @@ -202,9 +202,9 @@

Examples edge.attr.comb = list(weight = length) ) print(ug4, e = TRUE) -#> IGRAPH 3d5c110 U-W- 10 7 -- +#> IGRAPH 7c140b7 U-W- 10 7 -- #> + attr: weight (e/n) -#> + edges from 3d5c110: +#> + edges from 7c140b7: #> [1] 6-- 7 7-- 8 8-- 9 8-- 9 9-- 9 10--10 10--10

diff --git a/reference/as_graphnel.html b/reference/as_graphnel.html index 6f3d6391c7..01a8222639 100644 --- a/reference/as_graphnel.html +++ b/reference/as_graphnel.html @@ -105,10 +105,10 @@

ExamplesGNEL <- as_graphnel(g) g2 <- graph_from_graphnel(GNEL) g2 -#> IGRAPH 41a62c9 UNW- 10 10 -- Ring graph +#> IGRAPH d237569 UNW- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c), weight #> | (e/n) -#> + edges from 41a62c9 (vertex names): +#> + edges from d237569 (vertex names): #> [1] a--b a--j b--c c--d d--e e--f f--g g--h h--i i--j ## Directed @@ -117,9 +117,9 @@

ExamplesGNEL2 <- as_graphnel(g3) g4 <- graph_from_graphnel(GNEL2) g4 -#> IGRAPH 478d040 DNW- 10 9 -- In-star +#> IGRAPH c8f67b7 DNW- 10 9 -- In-star #> + attr: name (g/c), mode (g/c), center (g/n), name (v/c), weight (e/n) -#> + edges from 478d040 (vertex names): +#> + edges from c8f67b7 (vertex names): #> [1] b->a c->a d->a e->a f->a g->a h->a i->a j->a

diff --git a/reference/automorphism_group.html b/reference/automorphism_group.html index c513ebc07a..d61bd093eb 100644 --- a/reference/automorphism_group.html +++ b/reference/automorphism_group.html @@ -148,11 +148,11 @@

Examplesg <- make_ring(10) automorphism_group(g) #> [[1]] -#> + 10/10 vertices, from 930f4b6: +#> + 10/10 vertices, from d3ae321: #> [1] 1 10 9 8 7 6 5 4 3 2 #> #> [[2]] -#> + 10/10 vertices, from 930f4b6: +#> + 10/10 vertices, from d3ae321: #> [1] 2 3 4 5 6 7 8 9 10 1 #>

diff --git a/reference/bfs.html b/reference/bfs.html index 33c84e41cc..6aa2a9ea08 100644 --- a/reference/bfs.html +++ b/reference/bfs.html @@ -261,22 +261,22 @@

Examples#> [1] "out" #> #> $order -#> + 20/20 vertices, from 2e622ac: +#> + 20/20 vertices, from 637a2e3: #> [1] 1 2 10 3 9 4 8 5 7 6 11 12 20 13 19 14 18 15 17 16 #> #> $rank #> [1] 1 2 4 6 8 10 9 7 5 3 11 12 14 16 18 20 19 17 15 13 #> #> $father -#> + 20/20 vertices, from 2e622ac: +#> + 20/20 vertices, from 637a2e3: #> [1] NA 1 2 3 4 5 8 9 10 1 NA 11 12 13 14 15 18 19 20 11 #> #> $pred -#> + 20/20 vertices, from 2e622ac: +#> + 20/20 vertices, from 637a2e3: #> [1] NA 1 10 9 8 7 5 4 3 2 NA 11 20 19 18 17 15 14 13 12 #> #> $succ -#> + 20/20 vertices, from 2e622ac: +#> + 20/20 vertices, from 637a2e3: #> [1] 2 10 9 8 7 NA 6 5 4 3 12 20 19 18 17 NA 16 15 14 13 #> #> $dist @@ -349,7 +349,7 @@

Examples#> [1] "out" #> #> $order -#> + 20/20 vertices, from aa0e7e0: +#> + 20/20 vertices, from 09f6dcf: #> [1] 1 2 10 3 9 4 8 5 7 6 11 12 20 13 19 14 18 15 17 16 #> #> $rank diff --git a/reference/bipartite_projection.html b/reference/bipartite_projection.html index e4612ac281..250f34d3fe 100644 --- a/reference/bipartite_projection.html +++ b/reference/bipartite_projection.html @@ -167,15 +167,15 @@

Examplesg2$name <- "Event network" proj2 <- bipartite_projection(g2) print(proj2[[1]], g = TRUE, e = TRUE) -#> IGRAPH ccb706a UNW- 5 6 -- Event network +#> IGRAPH 7bfb01d UNW- 5 6 -- Event network #> + attr: name (g/c), name (v/c), weight (e/n) -#> + edges from ccb706a (vertex names): +#> + edges from 7bfb01d (vertex names): #> [1] Alice--Bob Alice--Cecil Alice--Dan Bob --Cecil Bob --Dan #> [6] Cecil--Dan print(proj2[[2]], g = TRUE, e = TRUE) -#> IGRAPH 14306a8 UNW- 3 2 -- Event network +#> IGRAPH fd7b304 UNW- 3 2 -- Event network #> + attr: name (g/c), name (v/c), weight (e/n) -#> + edges from 14306a8 (vertex names): +#> + edges from fd7b304 (vertex names): #> [1] Party --Skiing Skiing--Badminton

diff --git a/reference/c.igraph.es.html b/reference/c.igraph.es.html index 7a5b41ac8f..6e4431bd82 100644 --- a/reference/c.igraph.es.html +++ b/reference/c.igraph.es.html @@ -95,7 +95,7 @@

See alsoExamples

g <- make_(ring(10), with_vertex_(name = LETTERS[1:10]))
 c(E(g)[1], E(g)["A|B"], E(g)[1:4])
-#> + 6/10 edges from 456b643 (vertex names):
+#> + 6/10 edges from 3316c08 (vertex names):
 #> [1] A--B A--B A--B B--C C--D D--E
 
diff --git a/reference/c.igraph.vs.html b/reference/c.igraph.vs.html index 89a12ab3e1..d26260144c 100644 --- a/reference/c.igraph.vs.html +++ b/reference/c.igraph.vs.html @@ -95,7 +95,7 @@

See alsoExamples

g <- make_(ring(10), with_vertex_(name = LETTERS[1:10]))
 c(V(g)[1], V(g)["A"], V(g)[1:4])
-#> + 6/10 vertices, named, from bfecbdc:
+#> + 6/10 vertices, named, from bbf0071:
 #> [1] A A A B C D
 
diff --git a/reference/cliques.html b/reference/cliques.html index 3da8e3b488..3e5773ff78 100644 --- a/reference/cliques.html +++ b/reference/cliques.html @@ -177,156 +177,156 @@

Examples#> [1] 6 cliques(g, min = 6) #> [[1]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 6 7 20 76 87 94 #> #> [[2]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 7 20 28 53 76 94 #> #> [[3]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 17 24 50 57 87 93 #> #> [[4]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 15 31 40 56 63 #> #> [[5]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 31 40 56 63 97 #> #> [[6]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 13 68 69 75 97 #> #> [[7]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 13 56 68 75 97 #> #> [[8]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 56 63 68 81 82 97 #> #> [[9]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 15 28 31 66 85 93 #> #> [[10]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 3 38 50 68 96 99 #> #> [[11]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 28 72 79 94 #> #> [[12]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 54 72 79 94 #> #> [[13]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 63 79 94 97 #> #> [[14]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 63 77 94 97 #> #> [[15]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 13 14 33 79 97 #> #> [[16]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 17 63 77 97 #> #> [[17]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 14 18 60 63 97 #> #> [[18]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 17 24 46 57 84 91 #> #> [[19]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 17 24 46 47 57 91 #> largest_cliques(g) #> [[1]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 3 99 50 96 68 38 #> #> [[2]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 28 72 79 94 #> #> [[3]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 54 79 72 94 #> #> [[4]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 97 17 63 77 #> #> [[5]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 97 79 13 33 #> #> [[6]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 97 79 63 94 #> #> [[7]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 5 14 97 77 94 63 #> #> [[8]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 6 7 94 87 20 76 #> #> [[9]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 7 53 94 28 76 20 #> #> [[10]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 97 13 68 75 56 #> #> [[11]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 97 13 68 75 69 #> #> [[12]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 97 63 14 60 18 #> #> [[13]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 97 63 40 56 31 #> #> [[14]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 8 15 63 56 40 31 #> #> [[15]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 15 93 31 85 28 66 #> #> [[16]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 17 93 50 87 57 24 #> #> [[17]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 17 46 91 57 24 84 #> #> [[18]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 17 46 91 57 24 47 #> #> [[19]] -#> + 6/100 vertices, from c6d203d: +#> + 6/100 vertices, from 4f1a6ea: #> [1] 56 97 82 68 81 63 #> @@ -334,567 +334,567 @@

Examplesg <- sample_gnp(100, 0.03) max_cliques(g) #> [[1]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 49 #> #> [[2]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 64 #> #> [[3]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 28 #> #> [[4]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 27 #> #> [[5]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 56 #> #> [[6]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 35 #> #> [[7]] -#> + 1/100 vertex, from c64da8c: +#> + 1/100 vertex, from c810543: #> [1] 4 #> #> [[8]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 89 80 #> #> [[9]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 38 57 #> #> [[10]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 70 1 #> #> [[11]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 12 31 #> #> [[12]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 93 22 #> #> [[13]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 21 63 #> #> [[14]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 73 50 #> #> [[15]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 96 31 #> #> [[16]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 25 23 #> #> [[17]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 99 94 #> #> [[18]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 32 75 #> #> [[19]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 100 39 #> #> [[20]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 44 16 #> #> [[21]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 62 61 #> #> [[22]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 36 2 #> #> [[23]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 50 87 #> #> [[24]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 51 3 #> #> [[25]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 33 85 #> #> [[26]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 33 65 #> #> [[27]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 34 98 #> #> [[28]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 34 58 #> #> [[29]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 37 88 #> #> [[30]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 37 85 #> #> [[31]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 37 65 #> #> [[32]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 39 72 #> #> [[33]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 39 57 #> #> [[34]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 39 46 #> #> [[35]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 40 66 #> #> [[36]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 40 61 #> #> [[37]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 40 60 #> #> [[38]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 40 31 #> #> [[39]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 41 82 #> #> [[40]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from c810543: #> [1] 41 18 #> #> [[41]] -#> + 2/100 vertices, from c64da8c: +#> + 2/100 vertices, from 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diff --git a/reference/cohesive_blocks.html b/reference/cohesive_blocks.html index 2de26b7a79..c76d97a87b 100644 --- a/reference/cohesive_blocks.html +++ b/reference/cohesive_blocks.html @@ -302,23 +302,23 @@

Examples#> '- B-5 c 3, n 4 ......o.oo o......... ... blocks(mwBlocks) #> [[1]] -#> + 23/23 vertices, named, from c2f7640: +#> + 23/23 vertices, named, from 805180a: #> [1] 1 2 3 4 5 6 7 21 8 11 14 19 9 10 12 13 16 15 17 18 20 22 23 #> #> [[2]] -#> + 14/23 vertices, named, from c2f7640: +#> + 14/23 vertices, named, from 805180a: #> [1] 1 2 3 4 5 6 7 21 19 17 18 20 22 23 #> #> [[3]] -#> + 10/23 vertices, named, from c2f7640: +#> + 10/23 vertices, named, from 805180a: #> [1] 7 8 11 14 9 10 12 13 16 15 #> #> [[4]] -#> + 7/23 vertices, named, from c2f7640: +#> + 7/23 vertices, named, from 805180a: #> [1] 1 2 3 4 5 6 7 #> #> [[5]] -#> + 4/23 vertices, named, from c2f7640: +#> + 4/23 vertices, named, from 805180a: #> [1] 7 8 11 14 #> cohesion(mwBlocks) diff --git a/reference/complementer.html b/reference/complementer.html index 36fd57321a..189ffba63b 100644 --- a/reference/complementer.html +++ b/reference/complementer.html @@ -117,9 +117,9 @@

Examples## Complementer of a ring g <- make_ring(10) complementer(g) -#> IGRAPH 3d6c3d8 U--- 10 35 -- Ring graph +#> IGRAPH c8bcad9 U--- 10 35 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l) -#> + edges from 3d6c3d8: +#> + edges from c8bcad9: #> [1] 1-- 9 1-- 8 1-- 7 1-- 6 1-- 5 1-- 4 1-- 3 2--10 2-- 9 2-- 8 2-- 7 2-- 6 #> [13] 2-- 5 2-- 4 3--10 3-- 9 3-- 8 3-- 7 3-- 6 3-- 5 4--10 4-- 9 4-- 8 4-- 7 #> [25] 4-- 6 5--10 5-- 9 5-- 8 5-- 7 6--10 6-- 9 6-- 8 7--10 7-- 9 8--10 @@ -129,10 +129,10 @@

Examplesgc <- complementer(g) gu <- union(g, gc) gu -#> IGRAPH 2b2de90 U--- 10 45 -- +#> IGRAPH 427e8d0 U--- 10 45 -- #> + attr: name_1 (g/c), name_2 (g/c), mutual_1 (g/l), mutual_2 (g/l), #> | circular_1 (g/l), circular_2 (g/l) -#> + edges from 2b2de90: +#> + edges from 427e8d0: #> [1] 9--10 8--10 8-- 9 7--10 7-- 9 7-- 8 6--10 6-- 9 6-- 8 6-- 7 5--10 5-- 9 #> [13] 5-- 8 5-- 7 5-- 6 4--10 4-- 9 4-- 8 4-- 7 4-- 6 4-- 5 3--10 3-- 9 3-- 8 #> [25] 3-- 7 3-- 6 3-- 5 3-- 4 2--10 2-- 9 2-- 8 2-- 7 2-- 6 2-- 5 2-- 4 2-- 3 diff --git a/reference/components.html b/reference/components.html index 6d5305f1d4..0a41df768c 100644 --- a/reference/components.html +++ b/reference/components.html @@ -201,9 +201,9 @@

Examples#> [1] 17 #> largest_component(g) -#> IGRAPH 4facc56 U--- 8 7 -- Erdos-Renyi (gnp) graph +#> IGRAPH 50654ec U--- 8 7 -- Erdos-Renyi (gnp) graph #> + attr: name (g/c), type (g/c), loops (g/l), p (g/n) -#> + edges from 4facc56: +#> + edges from 50654ec: #> [1] 2--3 1--4 4--5 2--6 5--6 6--7 6--8

diff --git a/reference/compose.html b/reference/compose.html index 4bb1f4f3a4..1a094e89a4 100644 --- a/reference/compose.html +++ b/reference/compose.html @@ -146,7 +146,7 @@

Examplesg2 <- make_star(10, mode = "undirected") gc <- compose(g1, g2) print_all(gc) -#> IGRAPH 9d88871 U--- 10 36 -- +#> IGRAPH d35c910 U--- 10 36 -- #> + attr: name_1 (g/c), name_2 (g/c), mutual (g/l), circular (g/l), mode #> | (g/c), center (g/n) #> + edges: @@ -161,7 +161,7 @@

Examples#> 9 -- 1 1 2 10 #> 10 -- 1 2 2 3 4 5 6 7 8 9 10 10 print_all(simplify(gc)) -#> IGRAPH 57e04a3 U--- 10 24 -- +#> IGRAPH 881e330 U--- 10 24 -- #> + attr: name_1 (g/c), name_2 (g/c), mutual (g/l), circular (g/l), mode #> | (g/c), center (g/n) #> + edges: diff --git a/reference/contract.html b/reference/contract.html index a7169e2ef9..bb1b85de7d 100644 --- a/reference/contract.html +++ b/reference/contract.html @@ -135,10 +135,10 @@

Examples## graph and edge attributes are kept, vertex attributes are ## combined using the 'toString' function. print(g2, g = TRUE, v = TRUE, e = TRUE) -#> IGRAPH 3b6cb82 UNW- 5 10 -- Ring +#> IGRAPH e9f9042 UNW- 5 10 -- Ring #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c), weight #> | (e/n) -#> + edges from 3b6cb82 (vertex names): +#> + edges from e9f9042 (vertex names): #> [1] a, b--a, b a, b--c, d c, d--c, d c, d--e, f e, f--e, f e, f--g, h #> [7] g, h--g, h g, h--i, j i, j--i, j a, b--i, j diff --git a/reference/delete_edges.html b/reference/delete_edges.html index 503aefb0cb..e63f999172 100644 --- a/reference/delete_edges.html +++ b/reference/delete_edges.html @@ -104,25 +104,25 @@

Examples
g <- make_ring(10) %>%
   delete_edges(seq(1, 9, by = 2))
 g
-#> IGRAPH 2feaab0 U--- 10 5 -- Ring graph
+#> IGRAPH 9c39334 U--- 10 5 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l)
-#> + edges from 2feaab0:
+#> + edges from 9c39334:
 #> [1] 2-- 3 4-- 5 6-- 7 8-- 9 1--10
 
 g <- make_ring(10) %>%
   delete_edges("10|1")
 g
-#> IGRAPH bd0a0cd U--- 10 9 -- Ring graph
+#> IGRAPH 3fd2a11 U--- 10 9 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l)
-#> + edges from bd0a0cd:
+#> + edges from 3fd2a11:
 #> [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 9--10
 
 g <- make_ring(5)
 g <- delete_edges(g, get_edge_ids(g, c(1, 5, 4, 5)))
 g
-#> IGRAPH 79e3445 U--- 5 3 -- Ring graph
+#> IGRAPH c6a74c8 U--- 5 3 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l)
-#> + edges from 79e3445:
+#> + edges from c6a74c8:
 #> [1] 1--2 2--3 3--4
 
diff --git a/reference/delete_vertices.html b/reference/delete_vertices.html index 0e8ad4632b..39a1bc77d7 100644 --- a/reference/delete_vertices.html +++ b/reference/delete_vertices.html @@ -101,23 +101,23 @@

Examples
g <- make_ring(10) %>%
   set_vertex_attr("name", value = LETTERS[1:10])
 g
-#> IGRAPH 7ed4b81 UN-- 10 10 -- Ring graph
+#> IGRAPH a1b94f8 UN-- 10 10 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c)
-#> + edges from 7ed4b81 (vertex names):
+#> + edges from a1b94f8 (vertex names):
 #>  [1] A--B B--C C--D D--E E--F F--G G--H H--I I--J A--J
 V(g)
-#> + 10/10 vertices, named, from 7ed4b81:
+#> + 10/10 vertices, named, from a1b94f8:
 #>  [1] A B C D E F G H I J
 
 g2 <- delete_vertices(g, c(1, 5)) %>%
   delete_vertices("B")
 g2
-#> IGRAPH eb9d5fb UN-- 7 5 -- Ring graph
+#> IGRAPH ecbe678 UN-- 7 5 -- Ring graph
 #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c)
-#> + edges from eb9d5fb (vertex names):
+#> + edges from ecbe678 (vertex names):
 #> [1] C--D F--G G--H H--I I--J
 V(g2)
-#> + 7/7 vertices, named, from eb9d5fb:
+#> + 7/7 vertices, named, from ecbe678:
 #> [1] C D F G H I J
 
diff --git a/reference/dfs.html b/reference/dfs.html index faf83afa59..ba2ca6af17 100644 --- a/reference/dfs.html +++ b/reference/dfs.html @@ -232,15 +232,15 @@

Examples#> [1] "out" #> #> $order -#> + 20/20 vertices, from a94a92b: +#> + 20/20 vertices, from fafaa7d: #> [1] 1 2 4 8 9 5 10 3 6 7 11 12 14 18 19 15 20 13 16 17 #> #> $order.out -#> + 20/20 vertices, from a94a92b: +#> + 20/20 vertices, from fafaa7d: #> [1] 8 9 4 10 5 2 6 7 3 1 18 19 14 20 15 12 16 17 13 11 #> #> $father -#> + 20/20 vertices, from a94a92b: +#> + 20/20 vertices, from fafaa7d: #> [1] NA 1 1 2 2 3 3 4 4 5 NA 11 11 12 12 13 13 14 14 15 #> #> $dist diff --git a/reference/diameter.html b/reference/diameter.html index 88c10e99f3..9df23d8643 100644 --- a/reference/diameter.html +++ b/reference/diameter.html @@ -131,12 +131,12 @@

Examplesdiameter(g) #> [1] 27 get_diameter(g) -#> + 5/10 vertices, from 7be4f18: +#> + 5/10 vertices, from c337fb4: #> [1] 1 10 9 8 7 diameter(g, weights = NA) #> [1] 5 get_diameter(g, weights = NA) -#> + 6/10 vertices, from 7be4f18: +#> + 6/10 vertices, from c337fb4: #> [1] 1 2 3 4 5 6

diff --git a/reference/difference.igraph.es.html b/reference/difference.igraph.es.html index 932de5788d..f93729176b 100644 --- a/reference/difference.igraph.es.html +++ b/reference/difference.igraph.es.html @@ -104,7 +104,7 @@

See alsoExamples

g <- make_(ring(10), with_vertex_(name = LETTERS[1:10]))
 difference(V(g), V(g)[6:10])
-#> + 5/10 vertices, named, from 676b75e:
+#> + 5/10 vertices, named, from 625fd7c:
 #> [1] A B C D E
 
diff --git a/reference/difference.igraph.html b/reference/difference.igraph.html index c879bda7af..15844f8aa0 100644 --- a/reference/difference.igraph.html +++ b/reference/difference.igraph.html @@ -143,7 +143,7 @@

ExamplesV(sstar)$name <- letters[c(1, 3, 5, 7, 9, 11)] G <- wheel %m% sstar print_all(G) -#> IGRAPH 1373ede UN-- 11 15 -- +#> IGRAPH b9f98c1 UN-- 11 15 -- #> + attr: name_1 (g/c), name_2 (g/c), mutual (g/l), circular (g/l), mode #> | (g/c), center (g/n), name (v/c) #> + edges (vertex names): diff --git a/reference/difference.igraph.vs.html b/reference/difference.igraph.vs.html index 8965b25381..0bf1c659bf 100644 --- a/reference/difference.igraph.vs.html +++ b/reference/difference.igraph.vs.html @@ -104,7 +104,7 @@

See alsoExamples

g <- make_(ring(10), with_vertex_(name = LETTERS[1:10]))
 difference(V(g), V(g)[6:10])
-#> + 5/10 vertices, named, from 4769dfe:
+#> + 5/10 vertices, named, from 7f8674b:
 #> [1] A B C D E
 
diff --git a/reference/disjoint_union.html b/reference/disjoint_union.html index 50f4c391bc..90bf5a4cad 100644 --- a/reference/disjoint_union.html +++ b/reference/disjoint_union.html @@ -132,10 +132,10 @@

Examplesg2 <- make_ring(10) V(g2)$name <- letters[11:20] print_all(g1 %du% g2) -#> IGRAPH 37f7ff4 UN-- 20 19 -- +#> IGRAPH 45768a2 UN-- 20 19 -- #> + attr: name_1 (g/c), name_2 (g/c), mode (g/c), center (g/n), mutual #> | (g/l), circular (g/l), name (v/c) -#> + edges from 37f7ff4 (vertex names): +#> + edges from 45768a2 (vertex names): #> [1] a--b a--c a--d a--e a--f a--g a--h a--i a--j k--l l--m m--n n--o o--p p--q #> [16] q--r r--s s--t k--t

diff --git a/reference/distances.html b/reference/distances.html index 09ce4796fb..211ff60db8 100644 --- a/reference/distances.html +++ b/reference/distances.html @@ -362,43 +362,43 @@

Examplesshortest_paths(g, 5) #> $vpath #> $vpath[[1]] -#> + 5/10 vertices, from a309ada: +#> + 5/10 vertices, from 387e7f7: #> [1] 5 4 3 2 1 #> #> $vpath[[2]] -#> + 4/10 vertices, from a309ada: +#> + 4/10 vertices, from 387e7f7: #> [1] 5 4 3 2 #> #> $vpath[[3]] -#> + 3/10 vertices, from a309ada: +#> + 3/10 vertices, from 387e7f7: #> [1] 5 4 3 #> #> $vpath[[4]] -#> + 2/10 vertices, from a309ada: +#> + 2/10 vertices, from 387e7f7: #> [1] 5 4 #> #> $vpath[[5]] -#> + 1/10 vertex, from a309ada: +#> + 1/10 vertex, from 387e7f7: #> [1] 5 #> #> $vpath[[6]] -#> + 2/10 vertices, from a309ada: +#> + 2/10 vertices, from 387e7f7: #> [1] 5 6 #> #> $vpath[[7]] -#> + 3/10 vertices, from a309ada: +#> + 3/10 vertices, from 387e7f7: #> [1] 5 6 7 #> #> $vpath[[8]] -#> + 4/10 vertices, from a309ada: +#> + 4/10 vertices, from 387e7f7: #> [1] 5 6 7 8 #> #> $vpath[[9]] -#> + 5/10 vertices, from a309ada: +#> + 5/10 vertices, from 387e7f7: #> [1] 5 6 7 8 9 #> #> $vpath[[10]] -#> + 6/10 vertices, from a309ada: +#> + 6/10 vertices, from 387e7f7: #> [1] 5 4 3 2 1 10 #> #> @@ -414,19 +414,19 @@

Examplesall_shortest_paths(g, 1, 6:8) #> $vpaths #> $vpaths[[1]] -#> + 6/10 vertices, from a309ada: +#> + 6/10 vertices, from 387e7f7: #> [1] 1 10 9 8 7 6 #> #> $vpaths[[2]] -#> + 6/10 vertices, from a309ada: +#> + 6/10 vertices, from 387e7f7: #> [1] 1 2 3 4 5 6 #> #> $vpaths[[3]] -#> + 5/10 vertices, from a309ada: +#> + 5/10 vertices, from 387e7f7: #> [1] 1 10 9 8 7 #> #> $vpaths[[4]] -#> + 4/10 vertices, from a309ada: +#> + 4/10 vertices, from 387e7f7: #> [1] 1 10 9 8 #> #> @@ -449,19 +449,19 @@

Examples#> #> $res #> $res[[1]] -#> + 6/10 vertices, from a309ada: +#> + 6/10 vertices, from 387e7f7: #> [1] 1 10 9 8 7 6 #> #> $res[[2]] -#> + 6/10 vertices, from a309ada: +#> + 6/10 vertices, from 387e7f7: #> [1] 1 2 3 4 5 6 #> #> $res[[3]] -#> + 5/10 vertices, from a309ada: +#> + 5/10 vertices, from 387e7f7: #> [1] 1 10 9 8 7 #> #> $res[[4]] -#> + 4/10 vertices, from a309ada: +#> + 4/10 vertices, from 387e7f7: #> [1] 1 10 9 8 #> #> diff --git a/reference/edge.html b/reference/edge.html index b80710f084..d1e8dc1cfb 100644 --- a/reference/edge.html +++ b/reference/edge.html @@ -120,7 +120,7 @@

Examples edge("8|9") E(g)[[]] -#> + 11/11 edges from 0182621: +#> + 11/11 edges from 3d70890: #> tail head tid hid color #> 1 1 2 1 2 red #> 2 2 3 2 3 red diff --git a/reference/edge_attr-set.html b/reference/edge_attr-set.html index 9c17124011..a643696998 100644 --- a/reference/edge_attr-set.html +++ b/reference/edge_attr-set.html @@ -111,10 +111,10 @@

Examples) edge_attr(g, "label") <- E(g)$name g -#> IGRAPH 32253c8 U--- 10 10 -- Ring graph +#> IGRAPH aa4030d U--- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (e/c), color #> | (e/c), label (e/c) -#> + edges from 32253c8: +#> + edges from aa4030d: #> [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 9--10 1--10 plot(g) diff --git a/reference/edge_attr.html b/reference/edge_attr.html index 13b2bf8234..a4996521bf 100644 --- a/reference/edge_attr.html +++ b/reference/edge_attr.html @@ -103,10 +103,10 @@

Examples set_edge_attr("weight", value = 1:10) %>% set_edge_attr("color", value = "red") g -#> IGRAPH a0ff4de U-W- 10 10 -- Ring graph +#> IGRAPH c8acb1a U-W- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), weight (e/n), color #> | (e/c) -#> + edges from a0ff4de: +#> + edges from c8acb1a: #> [1] 1-- 2 2-- 3 3-- 4 4-- 5 5-- 6 6-- 7 7-- 8 8-- 9 9--10 1--10 plot(g, edge.width = E(g)$weight) diff --git a/reference/ego.html b/reference/ego.html index 188d977f2c..8293ff6098 100644 --- a/reference/ego.html +++ b/reference/ego.html @@ -250,82 +250,82 @@

Examples ego(g, order = 0, 1:3) #> [[1]] -#> + 1/10 vertex, from c0c96f6: +#> + 1/10 vertex, from df574fd: #> [1] 1 #> #> [[2]] -#> + 1/10 vertex, from c0c96f6: +#> + 1/10 vertex, from df574fd: #> [1] 2 #> #> [[3]] -#> + 1/10 vertex, from c0c96f6: +#> + 1/10 vertex, from df574fd: #> [1] 3 #> ego(g, order = 1, 1:3) #> [[1]] -#> + 3/10 vertices, from c0c96f6: +#> + 3/10 vertices, from df574fd: #> [1] 1 2 10 #> #> [[2]] -#> + 3/10 vertices, from c0c96f6: +#> + 3/10 vertices, from df574fd: #> [1] 2 1 3 #> #> [[3]] -#> + 3/10 vertices, from c0c96f6: +#> + 3/10 vertices, from df574fd: #> [1] 3 2 4 #> ego(g, order = 2, 1:3) #> [[1]] -#> + 5/10 vertices, from c0c96f6: +#> + 5/10 vertices, from df574fd: #> [1] 1 2 10 3 9 #> #> [[2]] -#> + 5/10 vertices, from c0c96f6: +#> + 5/10 vertices, from df574fd: #> [1] 2 1 3 10 4 #> #> [[3]] -#> + 5/10 vertices, from c0c96f6: +#> + 5/10 vertices, from df574fd: #> [1] 3 2 4 1 5 #> # neighborhood() is an alias of ego() neighborhood(g, order = 0, 1:3) #> [[1]] -#> + 1/10 vertex, from c0c96f6: +#> + 1/10 vertex, from df574fd: #> [1] 1 #> #> [[2]] -#> + 1/10 vertex, from c0c96f6: +#> + 1/10 vertex, from df574fd: #> [1] 2 #> #> [[3]] -#> + 1/10 vertex, from c0c96f6: +#> + 1/10 vertex, from df574fd: #> [1] 3 #> neighborhood(g, order = 1, 1:3) #> [[1]] -#> + 3/10 vertices, from c0c96f6: +#> + 3/10 vertices, from df574fd: #> [1] 1 2 10 #> #> [[2]] -#> + 3/10 vertices, from c0c96f6: +#> + 3/10 vertices, from df574fd: #> [1] 2 1 3 #> #> [[3]] -#> + 3/10 vertices, from c0c96f6: +#> + 3/10 vertices, from df574fd: #> [1] 3 2 4 #> neighborhood(g, order = 2, 1:3) #> [[1]] -#> + 5/10 vertices, from c0c96f6: +#> + 5/10 vertices, from df574fd: #> [1] 1 2 10 3 9 #> #> [[2]] -#> + 5/10 vertices, from c0c96f6: +#> + 5/10 vertices, from df574fd: #> [1] 2 1 3 10 4 #> #> [[3]] -#> + 5/10 vertices, from c0c96f6: +#> + 5/10 vertices, from df574fd: #> [1] 3 2 4 1 5 #> @@ -333,41 +333,41 @@

ExamplesV(g)$name <- c("a", "b", "c", "d", "e", "f", "g", "h", "i", "j") make_ego_graph(g, order = 2, 1:3) #> [[1]] -#> IGRAPH 7830edf UN-- 5 4 -- Ring graph +#> IGRAPH 57bbb94 UN-- 5 4 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c) -#> + edges from 7830edf (vertex names): +#> + edges from 57bbb94 (vertex names): #> [1] a--b b--c a--j i--j #> #> [[2]] -#> IGRAPH 9412897 UN-- 5 4 -- Ring graph +#> IGRAPH d1c588e UN-- 5 4 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c) -#> + edges from 9412897 (vertex names): +#> + edges from d1c588e (vertex names): #> [1] a--b b--c c--d a--j #> #> [[3]] -#> IGRAPH 7d45e84 UN-- 5 4 -- Ring graph +#> IGRAPH 4a5c61b UN-- 5 4 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c) -#> + edges from 7d45e84 (vertex names): +#> + edges from 4a5c61b (vertex names): #> [1] a--b b--c c--d d--e #> # make_neighborhood_graph() is an alias of make_ego_graph() make_neighborhood_graph(g, order = 2, 1:3) #> [[1]] -#> IGRAPH ac39617 UN-- 5 4 -- Ring graph +#> IGRAPH 2562fc5 UN-- 5 4 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c) -#> + edges from ac39617 (vertex names): +#> + edges from 2562fc5 (vertex names): #> [1] a--b b--c a--j i--j #> #> [[2]] -#> IGRAPH 427f2d5 UN-- 5 4 -- Ring graph +#> IGRAPH f6da17f UN-- 5 4 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c) -#> + edges from 427f2d5 (vertex names): +#> + edges from f6da17f (vertex names): #> [1] a--b b--c c--d a--j #> #> [[3]] -#> IGRAPH 803c758 UN-- 5 4 -- Ring graph +#> IGRAPH f04b451 UN-- 5 4 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c) -#> + edges from 803c758 (vertex names): +#> + edges from f04b451 (vertex names): #> [1] a--b b--c c--d d--e #> diff --git a/reference/feedback_arc_set.html b/reference/feedback_arc_set.html index 8c46476cfe..ea02857457 100644 --- a/reference/feedback_arc_set.html +++ b/reference/feedback_arc_set.html @@ -142,10 +142,10 @@

Examples

 g <- sample_gnm(20, 40, directed = TRUE)
 feedback_arc_set(g)
-#> + 6/40 edges from f42d4b2:
+#> + 6/40 edges from 96747ac:
 #> [1]  6->15  6->19  9->15 11-> 3 16->10 17-> 5
 feedback_arc_set(g, algo = "approx_eades")
-#> + 6/40 edges from f42d4b2:
+#> + 6/40 edges from 96747ac:
 #> [1]  6->15  6->19  9->15 11-> 3 16->10 17-> 5
 
diff --git a/reference/get_edge_ids.html b/reference/get_edge_ids.html index fc7aa5b5fb..2b3cf3e11a 100644 --- a/reference/get_edge_ids.html +++ b/reference/get_edge_ids.html @@ -125,7 +125,7 @@

Examplesg <- make_ring(10) ei <- get_edge_ids(g, c(1, 2, 4, 5)) E(g)[ei] -#> + 2/10 edges from 89e8c54: +#> + 2/10 edges from e627d71: #> [1] 1--2 4--5 ## non-existant edge @@ -139,7 +139,7 @@

Exampleseis #> [1] 5 5 E(g)[eis] -#> + 2/5 edges from b191208: +#> + 2/5 edges from 6e4e0e6: #> [1] 1->2 1->2

diff --git a/reference/girth.html b/reference/girth.html index 1cf3cf96bc..676e4e6aa3 100644 --- a/reference/girth.html +++ b/reference/girth.html @@ -139,7 +139,7 @@

Examples#> [1] Inf #> #> $circle -#> + 0/1000 vertices, from 774089b: +#> + 0/1000 vertices, from e1c36a0: #> # The worst case running time is for a ring @@ -149,7 +149,7 @@

Examples#> [1] 100 #> #> $circle -#> + 100/100 vertices, from bd9d22b: +#> + 100/100 vertices, from dc5dd65: #> [1] 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 #> [19] 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 #> [37] 87 88 89 90 91 92 93 94 95 96 97 98 99 100 1 2 3 4 @@ -165,7 +165,7 @@

Examples#> [1] 12 #> #> $circle -#> + 12/1000 vertices, from dcaf177: +#> + 12/1000 vertices, from 1afde48: #> [1] 903 811 514 822 850 938 125 275 732 518 446 475 #> diff --git a/reference/graph_.html b/reference/graph_.html index 5384117018..c592ab94e5 100644 --- a/reference/graph_.html +++ b/reference/graph_.html @@ -72,12 +72,12 @@

Examples#> Warning: `graph_()` was deprecated in igraph 2.1.0. #> Please use constructors directly, for instance graph_from_edgelist(). #> graph_() will be removed in a future version of igraph. -#> IGRAPH 11c4e1b U--- 6 5 -- -#> + edges from 11c4e1b: +#> IGRAPH 1fab820 U--- 6 5 -- +#> + edges from 1fab820: #> [1] 1--2 2--3 3--4 4--5 5--6 graph_(cbind(1:5, 2:6), from_edgelist(), directed = FALSE) -#> IGRAPH 2fda9d5 U--- 6 5 -- -#> + edges from 2fda9d5: +#> IGRAPH 8394588 U--- 6 5 -- +#> + edges from 8394588: #> [1] 1--2 2--3 3--4 4--5 5--6

diff --git a/reference/graph_attr-set.html b/reference/graph_attr-set.html index 987f817d62..197765adf3 100644 --- a/reference/graph_attr-set.html +++ b/reference/graph_attr-set.html @@ -101,9 +101,9 @@

Examples
g <- make_graph(~ A - B:C:D)
 graph_attr(g, "name") <- "4-star"
 g
-#> IGRAPH 0f2266a UN-- 4 3 -- 4-star
+#> IGRAPH 6b68b14 UN-- 4 3 -- 4-star
 #> + attr: name (g/c), name (v/c)
-#> + edges from 0f2266a (vertex names):
+#> + edges from 6b68b14 (vertex names):
 #> [1] A--B A--C A--D
 
 graph_attr(g) <- list(
diff --git a/reference/graph_center.html b/reference/graph_center.html
index 06478e3f58..77a129d440 100644
--- a/reference/graph_center.html
+++ b/reference/graph_center.html
@@ -107,13 +107,13 @@ 

Examples

tree <- make_tree(100, 7)
 graph_center(tree)
-#> + 2/100 vertices, from 7e02fa0:
+#> + 2/100 vertices, from a785f32:
 #> [1] 1 2
 graph_center(tree, mode = "in")
-#> + 1/100 vertex, from 7e02fa0:
+#> + 1/100 vertex, from a785f32:
 #> [1] 1
 graph_center(tree, mode = "out")
-#> + 85/100 vertices, from 7e02fa0:
+#> + 85/100 vertices, from a785f32:
 #>  [1]  16  17  18  19  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34
 #> [20]  35  36  37  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53
 #> [39]  54  55  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72
@@ -123,12 +123,12 @@ 

Examples# Without and with weights ring <- make_ring(10) graph_center(ring) -#> + 10/10 vertices, from 76b4059: +#> + 10/10 vertices, from 1d64daa: #> [1] 1 2 3 4 5 6 7 8 9 10 # Add weights E(ring)$weight <- seq_len(ecount(ring)) graph_center(ring) -#> + 1/10 vertex, from 76b4059: +#> + 1/10 vertex, from 1d64daa: #> [1] 7

diff --git a/reference/graph_from_adjacency_matrix.html b/reference/graph_from_adjacency_matrix.html index 53605cd2af..27705015a5 100644 --- a/reference/graph_from_adjacency_matrix.html +++ b/reference/graph_from_adjacency_matrix.html @@ -309,7 +309,7 @@

Examples add.rownames = "code" ) summary(g10) -#> IGRAPH 05c5d39 DNW- 10 56 -- +#> IGRAPH 3a728df DNW- 10 56 -- #> + attr: name (v/c), code (v/c), weight (e/n)

diff --git a/reference/graph_from_atlas.html b/reference/graph_from_atlas.html index c622a69351..f413eaad45 100644 --- a/reference/graph_from_atlas.html +++ b/reference/graph_from_atlas.html @@ -127,14 +127,14 @@

See alsoExamples

## Some randomly picked graphs from the atlas
 graph_from_atlas(sample(0:1252, 1))
-#> IGRAPH d360c71 U--- 7 11 -- Graph from the Atlas #766
+#> IGRAPH af0fbbb U--- 7 11 -- Graph from the Atlas #766
 #> + attr: name (g/c), n (g/n)
-#> + edges from d360c71:
+#> + edges from af0fbbb:
 #>  [1] 4--5 1--5 1--2 2--3 3--4 1--6 4--6 1--4 2--6 3--6 6--7
 graph_from_atlas(sample(0:1252, 1))
-#> IGRAPH 2a5f2de U--- 7 12 -- Graph from the Atlas #893
+#> IGRAPH ffc062a U--- 7 12 -- Graph from the Atlas #893
 #> + attr: name (g/c), n (g/n)
-#> + edges from 2a5f2de:
+#> + edges from ffc062a:
 #>  [1] 1--2 2--3 3--4 5--6 1--5 2--4 2--5 3--5 1--4 4--6 1--3 2--7
 
diff --git a/reference/graph_from_biadjacency_matrix.html b/reference/graph_from_biadjacency_matrix.html index 15aff115e9..c610a6de4c 100644 --- a/reference/graph_from_biadjacency_matrix.html +++ b/reference/graph_from_biadjacency_matrix.html @@ -150,9 +150,9 @@

Examplescolnames(inc) <- letters[1:5] rownames(inc) <- LETTERS[1:3] graph_from_biadjacency_matrix(inc) -#> IGRAPH 9161e5b UN-B 8 9 -- +#> IGRAPH 1aa59a1 UN-B 8 9 -- #> + attr: type (v/l), name (v/c) -#> + edges from 9161e5b (vertex names): +#> + edges from 1aa59a1 (vertex names): #> [1] A--c A--d A--e B--a B--d B--e C--b C--c C--e

diff --git a/reference/graph_from_data_frame.html b/reference/graph_from_data_frame.html index 76b7a32908..2463ae5122 100644 --- a/reference/graph_from_data_frame.html +++ b/reference/graph_from_data_frame.html @@ -194,10 +194,10 @@

Examples) g <- graph_from_data_frame(relations, directed = TRUE, vertices = actors) print(g, e = TRUE, v = TRUE) -#> IGRAPH 376407a DN-- 5 6 -- +#> IGRAPH 0711adc DN-- 5 6 -- #> + attr: name (v/c), age (v/n), gender (v/c), same.dept (e/l), #> | friendship (e/n), advice (e/n) -#> + edges from 376407a (vertex names): +#> + edges from 0711adc (vertex names): #> [1] Bob ->Alice Cecil ->Bob Cecil ->Alice David ->Alice #> [5] David ->Bob Esmeralda->Alice diff --git a/reference/graph_from_edgelist.html b/reference/graph_from_edgelist.html index b47d6a6f26..b508c3b9d4 100644 --- a/reference/graph_from_edgelist.html +++ b/reference/graph_from_edgelist.html @@ -110,15 +110,15 @@

See alsoExamples

el <- matrix(c("foo", "bar", "bar", "foobar"), nc = 2, byrow = TRUE)
 graph_from_edgelist(el)
-#> IGRAPH 1ac5f5b DN-- 3 2 -- 
+#> IGRAPH d3e8f71 DN-- 3 2 -- 
 #> + attr: name (v/c)
-#> + edges from 1ac5f5b (vertex names):
+#> + edges from d3e8f71 (vertex names):
 #> [1] foo->bar    bar->foobar
 
 # Create a ring by hand
 graph_from_edgelist(cbind(1:10, c(2:10, 1)))
-#> IGRAPH a2cfb7e D--- 10 10 -- 
-#> + edges from a2cfb7e:
+#> IGRAPH 7374ce6 D--- 10 10 -- 
+#> + edges from 7374ce6:
 #>  [1]  1-> 2  2-> 3  3-> 4  4-> 5  5-> 6  6-> 7  7-> 8  8-> 9  9->10 10-> 1
 
diff --git a/reference/graph_from_graphnel.html b/reference/graph_from_graphnel.html index c5318f3759..181c020064 100644 --- a/reference/graph_from_graphnel.html +++ b/reference/graph_from_graphnel.html @@ -133,10 +133,10 @@

ExamplesGNEL <- as_graphnel(g) g2 <- graph_from_graphnel(GNEL) g2 -#> IGRAPH a9883f1 UNW- 10 10 -- Ring graph +#> IGRAPH 4c4413d UNW- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l), name (v/c), weight #> | (e/n) -#> + edges from a9883f1 (vertex names): +#> + edges from 4c4413d (vertex names): #> [1] a--b a--j b--c c--d d--e e--f f--g g--h h--i i--j ## Directed @@ -145,9 +145,9 @@

ExamplesGNEL2 <- as_graphnel(g3) g4 <- graph_from_graphnel(GNEL2) g4 -#> IGRAPH f0a50ae DNW- 10 9 -- In-star +#> IGRAPH a4b1011 DNW- 10 9 -- In-star #> + attr: name (g/c), mode (g/c), center (g/n), name (v/c), weight (e/n) -#> + edges from f0a50ae (vertex names): +#> + edges from a4b1011 (vertex names): #> [1] b->a c->a d->a e->a f->a g->a h->a i->a j->a

diff --git a/reference/graph_from_literal.html b/reference/graph_from_literal.html index 37ac8874da..d06362ee9d 100644 --- a/reference/graph_from_literal.html +++ b/reference/graph_from_literal.html @@ -146,18 +146,18 @@

Examples Cecil - Gordon ) g -#> IGRAPH d9b94b4 UN-- 6 6 -- +#> IGRAPH f20d1ee UN-- 6 6 -- #> + attr: name (v/c) -#> + edges from d9b94b4 (vertex names): +#> + edges from f20d1ee (vertex names): #> [1] Alice--Bob Alice--Cecil Bob --Cecil Cecil--Daniel Cecil--Eugene #> [6] Cecil--Gordon # Another undirected graph, ":" notation g2 <- graph_from_literal(Alice - Bob:Cecil:Daniel, Cecil:Daniel - Eugene:Gordon) g2 -#> IGRAPH ed1770e UN-- 6 7 -- +#> IGRAPH 464bc4c UN-- 6 7 -- #> + attr: name (v/c) -#> + edges from ed1770e (vertex names): +#> + edges from 464bc4c (vertex names): #> [1] Alice --Bob Alice --Cecil Alice --Daniel Cecil --Eugene Cecil --Gordon #> [6] Daniel--Eugene Daniel--Gordon @@ -167,18 +167,18 @@

Examples Eugene --+ Gordon:Helen ) g3 -#> IGRAPH 20e3bc5 DN-- 7 6 -- +#> IGRAPH f70b99a DN-- 7 6 -- #> + attr: name (v/c) -#> + edges from 20e3bc5 (vertex names): +#> + edges from f70b99a (vertex names): #> [1] Alice ->Bob Bob ->Alice Bob ->Cecil Daniel->Cecil Eugene->Gordon #> [6] Eugene->Helen # A graph with isolate vertices g4 <- graph_from_literal(Alice -- Bob -- Daniel, Cecil:Gordon, Helen) g4 -#> IGRAPH 8f6bd25 UN-- 6 2 -- +#> IGRAPH f4fe2b5 UN-- 6 2 -- #> + attr: name (v/c) -#> + edges from 8f6bd25 (vertex names): +#> + edges from f4fe2b5 (vertex names): #> [1] Alice--Bob Bob --Daniel V(g4)$name #> [1] "Alice" "Bob" "Daniel" "Cecil" "Gordon" "Helen" @@ -186,17 +186,17 @@

Examples# "Arrows" can be arbitrarily long g5 <- graph_from_literal(Alice +---------+ Bob) g5 -#> IGRAPH 0a22070 DN-- 2 2 -- +#> IGRAPH 41a21ab DN-- 2 2 -- #> + attr: name (v/c) -#> + edges from 0a22070 (vertex names): +#> + edges from 41a21ab (vertex names): #> [1] Alice->Bob Bob ->Alice # Special vertex names g6 <- graph_from_literal("+" -- "-", "*" -- "/", "%%" -- "%/%") g6 -#> IGRAPH 2cde184 UN-- 6 3 -- +#> IGRAPH 6700e87 UN-- 6 3 -- #> + attr: name (v/c) -#> + edges from 2cde184 (vertex names): +#> + edges from 6700e87 (vertex names): #> [1] + --- * --/ %%--%/%

diff --git a/reference/graph_id.html b/reference/graph_id.html index e21e524002..f271b176f6 100644 --- a/reference/graph_id.html +++ b/reference/graph_id.html @@ -83,15 +83,15 @@

Value

Examples

g <- make_ring(10)
 graph_id(g)
-#> [1] "2e3305a7-5614-433b-bd49-46190be07398"
+#> [1] "a00b253c-3bdc-4787-801e-56b258b027ab"
 graph_id(V(g))
-#> [1] "2e3305a7-5614-433b-bd49-46190be07398"
+#> [1] "a00b253c-3bdc-4787-801e-56b258b027ab"
 graph_id(E(g))
-#> [1] "2e3305a7-5614-433b-bd49-46190be07398"
+#> [1] "a00b253c-3bdc-4787-801e-56b258b027ab"
 
 g2 <- g + 1
 graph_id(g2)
-#> [1] "db1aa8ec-5b2f-407d-acdc-c8cae9a35e10"
+#> [1] "50fc7974-59a1-4424-93b8-a7694ec9f76a"
 
diff --git a/reference/igraph-es-indexing.html b/reference/igraph-es-indexing.html index fcad15df58..ba8da08da2 100644 --- a/reference/igraph-es-indexing.html +++ b/reference/igraph-es-indexing.html @@ -197,13 +197,13 @@

Examples# Special operators for indexing based on graph structure g <- sample_pa(100, power = 0.3) E(g)[1:3 %--% 2:6] -#> + 4/99 edges from 3d87d0e: +#> + 4/99 edges from 37d1484: #> [1] 2->1 3->1 4->1 6->1 E(g)[1:5 %->% 1:6] -#> + 4/99 edges from 3d87d0e: +#> + 4/99 edges from 37d1484: #> [1] 2->1 3->1 4->1 5->4 E(g)[1:3 %<-% 2:6] -#> + 4/99 edges from 3d87d0e: +#> + 4/99 edges from 37d1484: #> [1] 2->1 3->1 4->1 6->1 # ----------------------------------------------------------------- @@ -211,7 +211,7 @@

Examplesg <- sample_pa(100, directed = FALSE) d <- get_diameter(g) E(g, path = d) -#> + 11/99 edges from b2e474c: +#> + 11/99 edges from 8b26a89: #> [1] 53--81 49--53 43--49 4--43 2-- 4 2-- 5 5-- 9 9--14 14--36 36--58 #> [11] 58--85 @@ -220,7 +220,7 @@

Examplesg <- sample_gnp(20, 3 / 20) %>% set_edge_attr("weight", value = rnorm(gsize(.))) E(g)[[weight < 0]] -#> + 19/32 edges from 122dfd6: +#> + 19/32 edges from 83d30ce: #> tail head tid hid weight #> 2 1 6 1 6 -1.0667237 #> 3 5 6 5 6 -2.7731724 @@ -247,7 +247,7 @@

ExamplesE(g)$x <- E(g)$weight x <- 2 E(g)[.env$x] -#> + 1/32 edge from 122dfd6: +#> + 1/32 edge from 83d30ce: #> [1] 1--6

diff --git a/reference/igraph-es-indexing2.html b/reference/igraph-es-indexing2.html index 8eb7a4ad3d..2e1dc722d0 100644 --- a/reference/igraph-es-indexing2.html +++ b/reference/igraph-es-indexing2.html @@ -120,10 +120,10 @@

Examples with_edge_(weight = 1:10, color = "green") ) E(g) -#> + 10/10 edges from 092d7d8 (vertex names): +#> + 10/10 edges from 069065c (vertex names): #> [1] A--B B--C C--D D--E E--F F--G G--H H--I I--J A--J E(g)[[]] -#> + 10/10 edges from 092d7d8 (vertex names): +#> + 10/10 edges from 069065c (vertex names): #> tail head tid hid weight color #> 1 A B 1 2 1 green #> 2 B C 2 3 2 green @@ -136,7 +136,7 @@

Examples#> 9 I J 9 10 9 green #> 10 A J 1 10 10 green E(g)[[.inc("A")]] -#> + 2/10 edges from 092d7d8 (vertex names): +#> + 2/10 edges from 069065c (vertex names): #> tail head tid hid weight color #> 1 A B 1 2 1 green #> 10 A J 1 10 10 green diff --git a/reference/igraph-vs-indexing.html b/reference/igraph-vs-indexing.html index 54c16dc685..34eb2f83df 100644 --- a/reference/igraph-vs-indexing.html +++ b/reference/igraph-vs-indexing.html @@ -215,26 +215,26 @@

Examples# nei() special function g <- make_graph(c(1, 2, 2, 3, 2, 4, 4, 2)) V(g)[.nei(c(2, 4))] -#> + 4/4 vertices, from eb7ae20: +#> + 4/4 vertices, from 5b5c2ea: #> [1] 1 2 3 4 V(g)[.nei(c(2, 4), "in")] -#> + 3/4 vertices, from eb7ae20: +#> + 3/4 vertices, from 5b5c2ea: #> [1] 1 2 4 V(g)[.nei(c(2, 4), "out")] -#> + 3/4 vertices, from eb7ae20: +#> + 3/4 vertices, from 5b5c2ea: #> [1] 2 3 4 # ----------------------------------------------------------------- # The same with vertex names g <- make_graph(~ A -+ B, B -+ C:D, D -+ B) V(g)[.nei(c("B", "D"))] -#> + 4/4 vertices, named, from d765ec8: +#> + 4/4 vertices, named, from ffb80c2: #> [1] A B C D V(g)[.nei(c("B", "D"), "in")] -#> + 3/4 vertices, named, from d765ec8: +#> + 3/4 vertices, named, from ffb80c2: #> [1] A B D V(g)[.nei(c("B", "D"), "out")] -#> + 3/4 vertices, named, from d765ec8: +#> + 3/4 vertices, named, from ffb80c2: #> [1] B C D # ----------------------------------------------------------------- @@ -242,7 +242,7 @@

Examplesg <- make_graph(~ A -+ B, B -+ C:D, D -+ B) V(g)$color <- c("red", "red", "green", "green") V(g)[color == "red"] -#> + 2/4 vertices, named, from c2a2b0c: +#> + 2/4 vertices, named, from d128a76: #> [1] A B # Indexing with a variable whose name matches the name of an attribute @@ -250,7 +250,7 @@

ExamplesV(g)$x <- 10:13 x <- 2 V(g)[.env$x] -#> + 1/4 vertex, named, from c2a2b0c: +#> + 1/4 vertex, named, from d128a76: #> [1] B

diff --git a/reference/igraph-vs-indexing2.html b/reference/igraph-vs-indexing2.html index d50de6958e..bfd3d7c51c 100644 --- a/reference/igraph-vs-indexing2.html +++ b/reference/igraph-vs-indexing2.html @@ -118,10 +118,10 @@

Examples set_vertex_attr("color", value = "red") %>% set_vertex_attr("name", value = LETTERS[1:10]) V(g) -#> + 10/10 vertices, named, from d17acc1: +#> + 10/10 vertices, named, from dd300f1: #> [1] A B C D E F G H I J V(g)[[]] -#> + 10/10 vertices, named, from d17acc1: +#> + 10/10 vertices, named, from dd300f1: #> color name #> 1 red A #> 2 red B @@ -134,10 +134,10 @@

Examples#> 9 red I #> 10 red J V(g)[1:5] -#> + 5/10 vertices, named, from d17acc1: +#> + 5/10 vertices, named, from dd300f1: #> [1] A B C D E V(g)[[1:5]] -#> + 5/10 vertices, named, from d17acc1: +#> + 5/10 vertices, named, from dd300f1: #> color name #> 1 red A #> 2 red B diff --git a/reference/incident.html b/reference/incident.html index 7d66f8471a..54140a78b1 100644 --- a/reference/incident.html +++ b/reference/incident.html @@ -97,11 +97,11 @@

See alsoExamples

g <- make_graph("Zachary")
 incident(g, 1)
-#> + 16/78 edges from 607a747:
+#> + 16/78 edges from 4014a00:
 #>  [1] 1-- 2 1-- 3 1-- 4 1-- 5 1-- 6 1-- 7 1-- 8 1-- 9 1--11 1--12 1--13 1--14
 #> [13] 1--18 1--20 1--22 1--32
 incident(g, 34)
-#> + 17/78 edges from 607a747:
+#> + 17/78 edges from 4014a00:
 #>  [1]  9--34 10--34 14--34 15--34 16--34 19--34 20--34 21--34 23--34 24--34
 #> [11] 27--34 28--34 29--34 30--34 31--34 32--34 33--34
 
diff --git a/reference/incident_edges.html b/reference/incident_edges.html index 5a456db780..2ea65c1b72 100644 --- a/reference/incident_edges.html +++ b/reference/incident_edges.html @@ -100,12 +100,12 @@

Examples
g <- make_graph("Zachary")
 incident_edges(g, c(1, 34))
 #> [[1]]
-#> + 16/78 edges from ea43813:
+#> + 16/78 edges from 64b323d:
 #>  [1] 1-- 2 1-- 3 1-- 4 1-- 5 1-- 6 1-- 7 1-- 8 1-- 9 1--11 1--12 1--13 1--14
 #> [13] 1--18 1--20 1--22 1--32
 #> 
 #> [[2]]
-#> + 17/78 edges from ea43813:
+#> + 17/78 edges from 64b323d:
 #>  [1]  9--34 10--34 14--34 15--34 16--34 19--34 20--34 21--34 23--34 24--34
 #> [11] 27--34 28--34 29--34 30--34 31--34 32--34 33--34
 #> 
diff --git a/reference/intersection.igraph.es.html b/reference/intersection.igraph.es.html
index f902566d1b..3c9cfaacbe 100644
--- a/reference/intersection.igraph.es.html
+++ b/reference/intersection.igraph.es.html
@@ -96,7 +96,7 @@ 

See alsoExamples

g <- make_(ring(10), with_vertex_(name = LETTERS[1:10]))
 intersection(E(g)[1:6], E(g)[5:9])
-#> + 2/10 edges from 20e6438 (vertex names):
+#> + 2/10 edges from 888f962 (vertex names):
 #> [1] E--F F--G
 
diff --git a/reference/intersection.igraph.html b/reference/intersection.igraph.html index 2ac150ca30..f4c8c918fa 100644 --- a/reference/intersection.igraph.html +++ b/reference/intersection.igraph.html @@ -141,7 +141,7 @@

Examples) net2 <- graph_from_literal(D - A:F:Y, B - A - X - F - H - Z, F - Y) print_all(net1 %s% net2) -#> IGRAPH dc54949 UN-- 13 4 -- +#> IGRAPH ca651d4 UN-- 13 4 -- #> + attr: name (v/c) #> + vertex attributes: #> | name @@ -158,7 +158,7 @@

Examples#> | [11] Y #> | [12] X #> | [13] Z -#> + edges from dc54949 (vertex names): +#> + edges from ca651d4 (vertex names): #> [1] F--H A--B D--F D--A

diff --git a/reference/intersection.igraph.vs.html b/reference/intersection.igraph.vs.html index 19c81ed632..10cec77cb1 100644 --- a/reference/intersection.igraph.vs.html +++ b/reference/intersection.igraph.vs.html @@ -96,7 +96,7 @@

See alsoExamples

g <- make_(ring(10), with_vertex_(name = LETTERS[1:10]))
 intersection(E(g)[1:6], E(g)[5:9])
-#> + 2/10 edges from c772abd (vertex names):
+#> + 2/10 edges from ce5e1b0 (vertex names):
 #> [1] E--F F--G
 
diff --git a/reference/is_chordal.html b/reference/is_chordal.html index e53ccba171..7fcb949297 100644 --- a/reference/is_chordal.html +++ b/reference/is_chordal.html @@ -152,7 +152,7 @@

Examples#> [1] 9 4 6 8 3 5 7 2 1 #> #> $alpham1 -#> + 9/9 vertices, named, from 07d9486: +#> + 9/9 vertices, named, from a69fab4: #> [1] G F D B E C H I A #> is_chordal(g1, fillin = TRUE) @@ -176,7 +176,7 @@

Examples#> [1] 10 8 9 6 7 5 4 2 3 1 #> #> $alpham1 -#> + 10/10 vertices, named, from 4d55c10: +#> + 10/10 vertices, named, from 431073c: #> [1] J H I G C F D B E A #> is_chordal(g2, fillin = TRUE) diff --git a/reference/is_forest.html b/reference/is_forest.html index 6a84d011f9..666cf6335f 100644 --- a/reference/is_forest.html +++ b/reference/is_forest.html @@ -122,7 +122,7 @@

Examples#> [1] TRUE #> #> $roots -#> + 2/8 vertices, from 63da6e0: +#> + 2/8 vertices, from 708516e: #> [1] 1 4 #> diff --git a/reference/is_named.html b/reference/is_named.html index e473e5dd8a..9c356064d8 100644 --- a/reference/is_named.html +++ b/reference/is_named.html @@ -95,7 +95,7 @@

Examplesis_named(g) #> [1] TRUE neighbors(g, "a") -#> + 2/10 vertices, named, from ad37912: +#> + 2/10 vertices, named, from 760936d: #> [1] b j

diff --git a/reference/is_separator.html b/reference/is_separator.html index a3842d5419..b543c6f7f5 100644 --- a/reference/is_separator.html +++ b/reference/is_separator.html @@ -108,11 +108,11 @@

Examples
ring <- make_ring(4)
 min_st_separators(ring)
 #> [[1]]
-#> + 2/4 vertices, from f99c323:
+#> + 2/4 vertices, from 49f7d49:
 #> [1] 2 4
 #> 
 #> [[2]]
-#> + 2/4 vertices, from f99c323:
+#> + 2/4 vertices, from 49f7d49:
 #> [1] 1 3
 #> 
 is_separator(ring, 1)
diff --git a/reference/is_tree.html b/reference/is_tree.html
index 3e906dfe4e..1e2df5ee67 100644
--- a/reference/is_tree.html
+++ b/reference/is_tree.html
@@ -123,7 +123,7 @@ 

Examples#> [1] TRUE #> #> $root -#> + 1/7 vertex, from 9863bf3: +#> + 1/7 vertex, from 3a827e4: #> [1] 1 #> diff --git a/reference/is_weighted.html b/reference/is_weighted.html index 9e979e1943..d051bf294a 100644 --- a/reference/is_weighted.html +++ b/reference/is_weighted.html @@ -91,7 +91,7 @@

Examplesshortest_paths(g, 8, 2) #> $vpath #> $vpath[[1]] -#> + 5/10 vertices, from 9634e06: +#> + 5/10 vertices, from b0de97f: #> [1] 8 9 10 1 2 #> #> @@ -108,7 +108,7 @@

Examplesshortest_paths(g, 8, 2) #> $vpath #> $vpath[[1]] -#> + 7/10 vertices, from 9634e06: +#> + 7/10 vertices, from b0de97f: #> [1] 8 7 6 5 4 3 2 #> #> diff --git a/reference/ivs.html b/reference/ivs.html index 7c9a9c54ba..fd093ab7a6 100644 --- a/reference/ivs.html +++ b/reference/ivs.html @@ -143,83 +143,83 @@

Examples#> [1] 4 ivs(g, min = ivs_size(g)) #> [[1]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 7 37 55 56 #> #> [[2]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 7 55 56 69 #> #> [[3]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 7 56 69 74 #> #> [[4]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 8 15 73 80 #> #> [[5]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 8 15 73 84 #> #> [[6]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 13 16 37 40 #> #> [[7]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 21 32 45 61 #> #> [[8]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 22 55 56 64 #> #> [[9]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 23 69 75 90 #> largest_ivs(g) #> [[1]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 21 32 45 61 #> #> [[2]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 7 37 55 56 #> #> [[3]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 7 55 56 69 #> #> [[4]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 7 56 69 74 #> #> [[5]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 8 15 73 80 #> #> [[6]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 8 15 73 84 #> #> [[7]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 22 55 56 64 #> #> [[8]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 23 69 75 90 #> #> [[9]] -#> + 4/100 vertices, from a790bf5: +#> + 4/100 vertices, from e136bfe: #> [1] 13 16 37 40 #> # Empty graph induced_subgraph(g, largest_ivs(g)[[1]]) -#> IGRAPH 56be2e6 U--- 4 0 -- Erdos-Renyi (gnp) graph +#> IGRAPH fa5b58d U--- 4 0 -- Erdos-Renyi (gnp) graph #> + attr: name (g/c), type (g/c), loops (g/l), p (g/n) -#> + edges from 56be2e6: +#> + edges from fa5b58d: length(max_ivs(g)) #> [1] 326 diff --git a/reference/keeping_degseq.html b/reference/keeping_degseq.html index 11e7d132d1..13a982420c 100644 --- a/reference/keeping_degseq.html +++ b/reference/keeping_degseq.html @@ -98,7 +98,7 @@

Examples degree() #> [1] 2 2 2 2 2 2 2 2 2 2 print_all(rewire(g, with = keeping_degseq(niter = vcount(g) * 10))) -#> IGRAPH 1f2d770 U--- 10 10 -- Ring graph +#> IGRAPH d69b363 U--- 10 10 -- Ring graph #> + attr: name (g/c), mutual (g/l), circular (g/l) #> + graph attributes: #> | + name: @@ -107,7 +107,7 @@

Examples#> | [1] FALSE #> | + circular: #> | [1] TRUE -#> + edges from 1f2d770: +#> + edges from d69b363: #> [1] 2-- 8 3-- 7 6-- 9 4-- 5 5--10 1-- 7 6--10 2-- 3 4-- 9 1-- 8

diff --git a/reference/make_bipartite_graph.html b/reference/make_bipartite_graph.html index f019d72bbb..358cd4634d 100644 --- a/reference/make_bipartite_graph.html +++ b/reference/make_bipartite_graph.html @@ -121,9 +121,9 @@

Examples

 g <- make_bipartite_graph(rep(0:1, length.out = 10), c(1:10))
 print(g, v = TRUE)
-#> IGRAPH 673e0f2 U--B 10 5 -- 
+#> IGRAPH aaf6c47 U--B 10 5 -- 
 #> + attr: type (v/l)
-#> + edges from 673e0f2:
+#> + edges from aaf6c47:
 #> [1] 1-- 2 3-- 4 5-- 6 7-- 8 9--10
 
 
diff --git a/reference/make_de_bruijn_graph.html b/reference/make_de_bruijn_graph.html index 7a49b9034c..98033ab319 100644 --- a/reference/make_de_bruijn_graph.html +++ b/reference/make_de_bruijn_graph.html @@ -103,14 +103,14 @@

Examples# de Bruijn graphs can be created recursively by line graphs as well g <- make_de_bruijn_graph(2, 1) make_de_bruijn_graph(2, 2) -#> IGRAPH c9c7022 D--- 4 8 -- De-Bruijn graph 2-2 +#> IGRAPH 5b1208c D--- 4 8 -- De-Bruijn graph 2-2 #> + attr: name (g/c), m (g/n), n (g/n) -#> + edges from c9c7022: +#> + edges from 5b1208c: #> [1] 1->1 1->2 2->3 2->4 3->1 3->2 4->3 4->4 make_line_graph(g) -#> IGRAPH d3bf652 D--- 4 8 -- Line graph +#> IGRAPH 824afed D--- 4 8 -- Line graph #> + attr: name (g/c) -#> + edges from d3bf652: +#> + edges from 824afed: #> [1] 1->1 3->1 1->2 3->2 2->3 4->3 2->4 4->4 diff --git a/reference/make_empty_graph.html b/reference/make_empty_graph.html index 34a1545146..c5fcafd797 100644 --- a/reference/make_empty_graph.html +++ b/reference/make_empty_graph.html @@ -98,11 +98,11 @@