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wsclean-no-cuda.def
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wsclean-no-cuda.def
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Bootstrap: debootstrap
MirrorURL: http://archive.ubuntu.com/ubuntu/
OSVersion: jammy
%labels
APPLICATION_NAME Ubuntu LTS + wsclean + EveryBeam + IDG
OS_VERSION 22.04
APPLICATION_URL https://gitlab.com/aroffringa/wsclean.git
SYSTEM_NAME ilifu
SYSTEM_SINGULARITY_VERSION 4.3.1
SYSTEM_URL http://www.ilifu.ac.za
AUTHOR_NAME ilifu support
AUTHOR_EMAIL [email protected]
%environment
# Set system locale
export LC_ALL=C
export PYTHONPATH="$PYTHONPATH:/opt/build/EveryBeam/lib/python3.10"
export LD_LIBRARY_PATH="/usr/lib/x86_64-linux-gnu/:$LD_LIBRARY_PATH"
%post
##############################################################################
# Setting up Environment
export LD_LIBRARY_PATH="/usr/lib/x86_64-linux-gnu/:$LD_LIBRARY_PATH"
# Fix command prompt in Singularity 3.5.2
printf 'export PS1="\u@$SINGULARITY_NAME:\w$ "' > /.singularity.d/env/999-psvars.sh
###############################################################################
# Update Ubuntu Cache and begin install
apt update -y
apt-get install -y software-properties-common
apt-get install -y wget gcc libxml2 curl gpg-agent build-essential git vim
# Packages
apt-add-repository -y universe
apt-get update
apt-get install -y casacore-dev cmake g++ git pkg-config libblas-dev libboost-date-time-dev libboost-filesystem-dev libboost-program-options-dev libboost-system-dev libcfitsio-dev libfftw3-dev libgsl-dev libhdf5-dev liblapack-dev libopenmpi-dev libpython3-dev pkg-config
apt-get install -y git vim python3 python3-pip python3-distutils python-is-python3 bzip2
# Install EveryBeam
# EveryBeam dependencies https://everybeam.readthedocs.io/en/latest/build-instructions.html
apt-get -y install wget git make cmake g++ doxygen libboost-all-dev libhdf5-dev libfftw3-dev libblas-dev liblapack-dev libxml2-dev libgtkmm-3.0-dev libpython3-dev python3-distutils
apt-get -y install casacore-dev libcfitsio-dev wcslib-dev
python -m pip install sphinx sphinx_rtd_theme breathe myst-parser
mkdir -p /opt/build
cd /opt/build
export GIT_SSL_NO_VERIFY=1
git clone --recursive -j4 https://git.astron.nl/RD/EveryBeam.git
cd EveryBeam
mkdir build && cd build
cmake -DCMAKE_INSTALL_PREFIX=/opt/EveryBeam -DBUILD_WITH_PYTHON=On ..
make install
# Instal IDG
export IDGAPI_DIR=/usr/local/idg
export GIT_SSL_NO_VERIFY=1
cd /opt/build
git clone https://gitlab.com/astron-idg/idg.git
cd idg
mkdir build && cd build
cmake -DCMAKE_INSTALL_PREFIX=/usr/local/idg/ ..
make -j 4
make install
# Install wsclean
cd /opt/build
git clone -b v3.5 https://gitlab.com/aroffringa/wsclean.git
cd wsclean
git submodule update --init --recursive
mkdir -p build
cd build
cmake -DPORTABLE=Yes -DIDGAPI_DIR=/usr/local/idg -DEveryBeam_DIR=/opt/EveryBeam/lib/everybeam ..
make -j 4
make install
# Clean Up
apt clean
apt autoclean
apt autoremove -y