diff --git a/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
index d15530caa..558a93639 100644
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diff --git a/_downloads/24831b32e81d1315cd64203e4e17d1bf/simple_arctan_fit.zip b/_downloads/24831b32e81d1315cd64203e4e17d1bf/simple_arctan_fit.zip
index 352ba0438..f804e81b9 100644
Binary files a/_downloads/24831b32e81d1315cd64203e4e17d1bf/simple_arctan_fit.zip and b/_downloads/24831b32e81d1315cd64203e4e17d1bf/simple_arctan_fit.zip differ
diff --git a/_downloads/3b9b969a6a4343ec82db54cb1db2df83/EELS_curve_fitting.zip b/_downloads/3b9b969a6a4343ec82db54cb1db2df83/EELS_curve_fitting.zip
index 5bb2b900e..11d91e6b8 100644
Binary files a/_downloads/3b9b969a6a4343ec82db54cb1db2df83/EELS_curve_fitting.zip and b/_downloads/3b9b969a6a4343ec82db54cb1db2df83/EELS_curve_fitting.zip differ
diff --git a/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
index 783c1d662..02e6fba24 100644
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diff --git a/_downloads/90f956a0ec1a60c2f96c8c92607d6fea/plot_residual.zip b/_downloads/90f956a0ec1a60c2f96c8c92607d6fea/plot_residual.zip
index 4ff141a84..7e701f864 100644
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diff --git a/_images/sphx_glr_simple_arctan_fit_001.png b/_images/sphx_glr_simple_arctan_fit_001.png
index a68d17cf9..753f6a10e 100644
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diff --git a/_images/sphx_glr_simple_arctan_fit_thumb.png b/_images/sphx_glr_simple_arctan_fit_thumb.png
index 82eb5bc33..213b2453a 100644
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diff --git a/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt b/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt
index 1307a1729..01a7e6d66 100644
--- a/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt
+++ b/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt
@@ -38,8 +38,8 @@ png file.
 
  .. code-block:: none
 
-
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@@ -76,7 +76,7 @@ png file.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 17.367 seconds)
+   **Total running time of the script:** (0 minutes 21.185 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_EELS_curve_fitting.py:
diff --git a/_sources/auto_examples/model_fitting/plot_residual.rst.txt b/_sources/auto_examples/model_fitting/plot_residual.rst.txt
index ed7fdce3c..9e556b608 100644
--- a/_sources/auto_examples/model_fitting/plot_residual.rst.txt
+++ b/_sources/auto_examples/model_fitting/plot_residual.rst.txt
@@ -110,7 +110,7 @@ Fit for all navigation positions:
 
  .. code-block:: none
 
-    Exception ignored in: <function tqdm.__del__ at 0x7fddaca12fc0>
+    Exception ignored in: <function tqdm.__del__ at 0x7fd3db348b80>
     Traceback (most recent call last):
       File "/opt/hostedtoolcache/Python/3.11.10/x64/lib/python3.11/site-packages/tqdm/std.py", line 1148, in __del__
         self.close()
@@ -118,7 +118,7 @@ Fit for all navigation positions:
         self.disp(bar_style='danger', check_delay=False)
         ^^^^^^^^^
     AttributeError: 'tqdm_notebook' object has no attribute 'disp'
-
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+
      0%|          | 0/10 [00:00<?, ?it/s]
    100%|██████████| 10/10 [00:00<00:00, 1456.61it/s]
 
 
 
@@ -164,7 +164,7 @@ sphinx_gallery_thumbnail_number = 2
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.477 seconds)
+   **Total running time of the script:** (0 minutes 0.489 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_plot_residual.py:
diff --git a/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt b/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt
index 48d82a68c..d90e5c299 100644
--- a/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt
+++ b/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:18.192** total execution time for 3 files **from auto_examples/model_fitting**:
+**00:22.018** total execution time for 3 files **from auto_examples/model_fitting**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``EELS_curve_fitting.py``)
-     - 00:17.367
+     - 00:21.185
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``plot_residual.py``)
-     - 00:00.477
+     - 00:00.489
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``simple_arctan_fit.py``)
-     - 00:00.348
+     - 00:00.343
      - 0.0
diff --git a/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt b/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt
index dba89321a..d8cd3d461 100644
--- a/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt
+++ b/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt
@@ -42,9 +42,9 @@ Fit an arctan function.
     Active: True
     Parameter Name |    Free |      Value |        Std |        Min |        Max | Linear
     ============== | ======= | ========== | ========== | ========== | ========== | ======
-                 A |    True | 1.00004802 | 0.00210701 |       None |       None |   True
-                 k |    True | 0.92833426 | 0.07460465 |       None |       None |  False
-                x0 |    True | -0.0472397 | 0.08151317 |       None |       None |  False
+                 A |    True | 1.00270307 | 0.00213650 |       None |       None |   True
+                 k |    True | 1.04120163 | 0.09013824 |       None |       None |  False
+                x0 |    True | -0.0580727 | 0.07758551 |       None |       None |  False
 
 
 
@@ -91,7 +91,7 @@ Fit an arctan function.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.348 seconds)
+   **Total running time of the script:** (0 minutes 0.343 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_simple_arctan_fit.py:
diff --git a/_sources/sg_execution_times.rst.txt b/_sources/sg_execution_times.rst.txt
index ed1d174fa..b89b0485a 100644
--- a/_sources/sg_execution_times.rst.txt
+++ b/_sources/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:18.192** total execution time for 3 files **from all galleries**:
+**00:22.018** total execution time for 3 files **from all galleries**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``../examples/model_fitting/EELS_curve_fitting.py``)
-     - 00:17.367
+     - 00:21.185
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``../examples/model_fitting/plot_residual.py``)
-     - 00:00.477
+     - 00:00.489
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``../examples/model_fitting/simple_arctan_fit.py``)
-     - 00:00.348
+     - 00:00.343
      - 0.0
diff --git a/auto_examples/model_fitting/EELS_curve_fitting.html b/auto_examples/model_fitting/EELS_curve_fitting.html
index e28aa6379..2659417e1 100644
--- a/auto_examples/model_fitting/EELS_curve_fitting.html
+++ b/auto_examples/model_fitting/EELS_curve_fitting.html
@@ -452,65 +452,64 @@
 <p>Performs curve fitting to an EELS spectrum, plots the result and saves it as
 png file.</p>
 <img src="../../_images/sphx_glr_EELS_curve_fitting_001.png" srcset="../../_images/sphx_glr_EELS_curve_fitting_001.png" alt="coreloss_spectrum Signal" class = "sphx-glr-single-img"/><div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>  0%|                                              | 0.00/42.3M [00:00&lt;?, ?B/s]
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@@ -538,7 +537,7 @@
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diff --git a/auto_examples/model_fitting/plot_residual.html b/auto_examples/model_fitting/plot_residual.html
index 7ac1a3105..93e90b929 100644
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 <p>Plot the fitted model with residual:</p>
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 <li><img src="../../_images/sphx_glr_plot_residual_002.png" srcset="../../_images/sphx_glr_plot_residual_002.png" alt="Signal" class = "sphx-glr-multi-img"/></li>
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diff --git a/auto_examples/model_fitting/sg_execution_times.html b/auto_examples/model_fitting/sg_execution_times.html
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--- a/auto_examples/model_fitting/sg_execution_times.html
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   <section id="computation-times">
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 <tr class="row-even"><td><p><a class="reference internal" href="EELS_curve_fitting.html#sphx-glr-auto-examples-model-fitting-eels-curve-fitting-py"><span class="std std-ref">EELS curve fitting</span></a> (<code class="docutils literal notranslate"><span class="pre">EELS_curve_fitting.py</span></code>)</p></td>
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 <td><p>0.0</p></td>
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diff --git a/auto_examples/model_fitting/simple_arctan_fit.html b/auto_examples/model_fitting/simple_arctan_fit.html
index 2334a3c2e..bcf16507c 100644
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@@ -455,9 +455,9 @@
 Active: True
 Parameter Name |    Free |      Value |        Std |        Min |        Max | Linear
 ============== | ======= | ========== | ========== | ========== | ========== | ======
-             A |    True | 1.00004802 | 0.00210701 |       None |       None |   True
-             k |    True | 0.92833426 | 0.07460465 |       None |       None |  False
-            x0 |    True | -0.0472397 | 0.08151317 |       None |       None |  False
+             A |    True | 1.00270307 | 0.00213650 |       None |       None |   True
+             k |    True | 1.04120163 | 0.09013824 |       None |       None |  False
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 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-model-fitting-simple-arctan-fit-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/9fccdf8a75923677d25708442159bb9b/simple_arctan_fit.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">simple_arctan_fit.ipynb</span></code></a></p>
diff --git a/changes.html b/changes.html
index ab2e08fdb..723ff4dac 100644
--- a/changes.html
+++ b/changes.html
@@ -530,7 +530,7 @@ <h3>New features<a class="headerlink" href="#id28" title="Link to this heading">
 <a class="reference external" href="https://gitlab.com/gguzzina/gosh">GOSH</a> open file format. By default, a freely
 usable dataset is downloaded from <a class="reference external" href="https://zenodo.org/record/6599071">doi:10.5281/zenodo.7645765</a>
 (<a class="reference external" href="https://github.com/hyperspy/hyperspy/issues/3082">HyperSpy #3082</a>)</p></li>
-<li><p>Add functionality to fit the <a class="reference internal" href="user_guide/eels.html#eels-fine-structure"><span class="std std-ref">EELS fine structure</span></a> using components, e.g. <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Gaussian" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.model.components1D.Gaussian</span></code></a>. (<a class="reference external" href="https://github.com/hyperspy/hyperspy/issues/3206">HyperSpy #3206</a>)</p></li>
+<li><p>Add functionality to fit the <a class="reference internal" href="user_guide/eels.html#eels-fine-structure"><span class="std std-ref">EELS fine structure</span></a> using components, e.g. <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Gaussian" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.model.components1D.Gaussian</span></code></a>. (<a class="reference external" href="https://github.com/hyperspy/hyperspy/issues/3206">HyperSpy #3206</a>)</p></li>
 </ul>
 </section>
 <section id="id29">
diff --git a/reference/components.html b/reference/components.html
index cbf1a300f..b09080d1e 100644
--- a/reference/components.html
+++ b/reference/components.html
@@ -477,7 +477,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.DoublePowerLaw">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">DoublePowerLaw</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">A</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-05</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">r</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">3.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">origin</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">shift</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">20.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ratio</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">left_cutoff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">module</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'numexpr'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">compute_gradients</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.components.DoublePowerLaw" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
 <p>Double power law component for EELS spectra.</p>
 <div class="math notranslate nohighlight">
 \[f(x) = A \cdot [s_r \cdot (x - x_0 - x_s)^{-r} + (x - x_0)^{-r}]\]</div>
@@ -551,7 +551,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.EELSArctan">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">EELSArctan</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">A</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">k</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x0</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">module</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">['numpy']</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.components.EELSArctan" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
 <p>Arctan function component for EELS (with minimum at zero).</p>
 <div class="math notranslate nohighlight">
 \[f(x) = A \cdot \left( \frac{\pi}{2} +
@@ -593,7 +593,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.EELSCLEdge">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">EELSCLEdge</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">element_subshell</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">GOS</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'dft'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gos_file_path</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.components.EELSCLEdge" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
 <p>EELS core loss ionisation edge from hydrogenic or tabulated
 GOS with splines for fine structure fitting.</p>
 <p>Hydrogenic GOS are limited to K and L shells.</p>
@@ -777,7 +777,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <li><p>parameters: a list of dictionaries of the parameters, one per
 component.</p></li>
 <li><p>_whitelist: a dictionary with keys used as references saved
-attributes, for more information, see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.export_dictionary.export_to_dictionary" title="(in HyperSpy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">export_to_dictionary()</span></code></a>.</p></li>
+attributes, for more information, see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.export_dictionary.export_to_dictionary" title="(in HyperSpy v2.2)"><code class="xref py py-func docutils literal notranslate"><span class="pre">export_to_dictionary()</span></code></a>.</p></li>
 <li><p>any field from _whitelist.keys().</p></li>
 </ul>
 </p>
@@ -869,7 +869,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.PESCoreLineShape">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">PESCoreLineShape</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">A</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">FWHM</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">origin</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ab</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">shirley</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.components.PESCoreLineShape" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
 <p>Gaussian component with a Shirley background for photoemission
 spectroscopy analysis.</p>
 <dl class="field-list simple">
@@ -893,7 +893,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.PESVoigt">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">PESVoigt</span></span><a class="headerlink" href="#exspy.components.PESVoigt" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
 <p>Voigt component for photoemission spectroscopy data analysis.</p>
 <p>Voigt profile component with support for shirley background,
 non_isochromaticity, transmission_function corrections and spin orbit
@@ -976,7 +976,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.SEE">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">SEE</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">A</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">Phi</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">B</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">module</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'numexpr'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">compute_gradients</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.components.SEE" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
 <p>Secondary electron emission component for Photoemission Spectroscopy.</p>
 <div class="math notranslate nohighlight">
 \[
@@ -1022,7 +1022,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.Vignetting">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">Vignetting</span></span><a class="headerlink" href="#exspy.components.Vignetting" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a></p>
 <p>Model the vignetting of the lens with a cos^4 law multiplied by lines on
 the edges</p>
 <dl class="field-list simple">
@@ -1038,7 +1038,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.components.VolumePlasmonDrude">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.components.</span></span><span class="sig-name descname"><span class="pre">VolumePlasmonDrude</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">intensity</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">plasmon_energy</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">15.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fwhm</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.5</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">module</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'numexpr'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">compute_gradients</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.components.VolumePlasmonDrude" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Expression</span></code></a></p>
 <p>Drude volume plasmon energy loss function component, the energy loss
 function is defined as:</p>
 <div class="math notranslate nohighlight">
@@ -1069,7 +1069,7 @@ <h1><a class="reference internal" href="#module-exspy.components" title="exspy.c
 <li><p><strong>plasmon_energy</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)"><em>float</em></a>)</p></li>
 <li><p><strong>fwhm</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)"><em>float</em></a>)</p></li>
 <li><p><strong>**kwargs</strong> – Extra keyword arguments are passed to the
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy._components.expression.Expression</span></code></a> component.</p></li>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.model/components1D.html#hyperspy.api.model.components1D.Expression" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy._components.expression.Expression</span></code></a> component.</p></li>
 </ul>
 </dd>
 </dl>
diff --git a/reference/material.html b/reference/material.html
index 4482359d5..ce0f4e6bc 100644
--- a/reference/material.html
+++ b/reference/material.html
@@ -522,7 +522,7 @@ <h1><a class="reference internal" href="#module-exspy.material" title="exspy.mat
 <dd class="field-even"><p><strong>density</strong> – The density in g/cm3.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p><a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)">numpy.ndarray</a> of <a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)">float</a> or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)">hyperspy.api.signals.BaseSignal</a></p>
+<dd class="field-odd"><p><a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)">numpy.ndarray</a> of <a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)">float</a> or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)">hyperspy.api.signals.BaseSignal</a></p>
 </dd>
 </dl>
 <p class="rubric">Examples</p>
@@ -607,7 +607,7 @@ <h1><a class="reference internal" href="#module-exspy.material" title="exspy.mat
 <dd class="field-odd"><p><strong>mass_absorption_coefficient</strong> – The Mass absorption coefficient(s) of the mixture in cm^2/g</p>
 </dd>
 <dt class="field-even">Return type<span class="colon">:</span></dt>
-<dd class="field-even"><p><a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)">numpy.ndarray</a> of <a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)">float</a> or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)">hyperspy.api.signals.BaseSignal</a></p>
+<dd class="field-even"><p><a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)">numpy.ndarray</a> of <a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)">float</a> or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)">hyperspy.api.signals.BaseSignal</a></p>
 </dd>
 </dl>
 <div class="admonition seealso">
diff --git a/reference/models.html b/reference/models.html
index 8df90824b..250e27852 100644
--- a/reference/models.html
+++ b/reference/models.html
@@ -464,7 +464,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.models.EDSModel">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.models.</span></span><span class="sig-name descname"><span class="pre">EDSModel</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">spectrum</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">auto_background</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">auto_add_lines</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.models.EDSModel" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Model1D</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Model1D</span></code></a></p>
 <p>Build and fit a model of an EDS Signal1D.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
@@ -537,7 +537,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 component</p></li>
 <li><p>_whitelist: a dictionary with keys used as references for saved
 attributes, for more information, see
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.export_dictionary.export_to_dictionary" title="(in HyperSpy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">export_to_dictionary()</span></code></a></p></li>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.export_dictionary.export_to_dictionary" title="(in HyperSpy v2.2)"><code class="xref py py-func docutils literal notranslate"><span class="pre">export_to_dictionary()</span></code></a></p></li>
 <li><p>any field from _whitelist.keys()</p></li>
 </ul>
 </p>
@@ -846,7 +846,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.models.EELSModel">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.models.</span></span><span class="sig-name descname"><span class="pre">EELSModel</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal1D</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">auto_background</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">auto_add_edges</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">low_loss</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">GOS</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'dft'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dictionary</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gos_file_path</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.models.EELSModel" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Model1D</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Model1D</span></code></a></p>
 <p>Build an EELS model.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
@@ -879,7 +879,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <dd><p>Add component to Model.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
-<dd class="field-odd"><p><strong>thing</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a>) – The component to add to the model.</p>
+<dd class="field-odd"><p><strong>thing</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/component.html#hyperspy.component.Component" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Component</span></code></a>) – The component to add to the model.</p>
 </dd>
 </dl>
 </dd></dl>
@@ -1012,7 +1012,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <dt class="sig sig-object py" id="exspy.models.EELSModel.fit">
 <span class="sig-name descname"><span class="pre">fit</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">kind</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'std'</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.models.EELSModel.fit" title="Link to this definition">#</a></dt>
 <dd><p>Fits the model to the experimental data.</p>
-<p>Read more in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/model/fitting_model.html#model-fitting" title="(in HyperSpy v2.1)"><span class="xref std std-ref">User Guide</span></a>.</p>
+<p>Read more in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/model/fitting_model.html#model-fitting" title="(in HyperSpy v2.2)"><span class="xref std std-ref">User Guide</span></a>.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
@@ -1021,6 +1021,8 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 the <a class="reference internal" href="../user_guide/eels.html#eels-fitting"><span class="std std-ref">User Guide</span></a>.</p></li>
 <li><p><strong>optimizer</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a><em> or </em><em>None</em><em>, </em><em>default None</em>) – <p>The optimization algorithm used to perform the fitting.</p>
 <ul>
+<li><p>Non-linear optimizers:</p>
+<ul>
 <li><p><code class="docutils literal notranslate"><span class="pre">&quot;lm&quot;</span></code> performs least-squares optimization using the
 Levenberg-Marquardt algorithm, and supports bounds
 on parameters.</p></li>
@@ -1034,7 +1036,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 distance regression (ODR) algorithm. It does not support
 bounds on parameters. See <code class="xref py py-mod docutils literal notranslate"><span class="pre">scipy.odr</span></code> for more details.</p></li>
 <li><p>All of the available methods for <code class="xref py py-func docutils literal notranslate"><span class="pre">scipy.optimize.minimize()</span></code>
-can be used here. See the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/model/fitting_model.html#model-fitting" title="(in HyperSpy v2.1)"><span class="xref std std-ref">User Guide</span></a>
+can be used here. See the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/model/fitting_model.html#model-fitting" title="(in HyperSpy v2.2)"><span class="xref std std-ref">User Guide</span></a>
 documentation for more details.</p></li>
 <li><p><code class="docutils literal notranslate"><span class="pre">&quot;Differential</span> <span class="pre">Evolution&quot;</span></code> is a global optimization method.
 It does support bounds on parameters. See
@@ -1049,6 +1051,23 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <code class="xref py py-func docutils literal notranslate"><span class="pre">scipy.optimize.shgo()</span></code> for more details on available
 options. Requires <code class="docutils literal notranslate"><span class="pre">scipy</span> <span class="pre">&gt;=</span> <span class="pre">1.2.0</span></code>.</p></li>
 </ul>
+</li>
+<li><p>Linear optimizers:</p>
+<ul>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;lstsq&quot;</span></code> - least square using <a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.linalg.lstsq.html#numpy.linalg.lstsq" title="(in NumPy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">numpy.linalg.lstsq()</span></code></a>.</p></li>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;ols&quot;</span></code> - Ordinary least square using
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.LinearRegression</span></code></p></li>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;nnls&quot;</span></code> - Linear regression with positive constraints on the
+regression coefficients using
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.LinearRegression</span></code></p></li>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;ridge&quot;</span></code> - least square supporting regularisation using
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.Ridge</span></code>. The parameter
+<code class="docutils literal notranslate"><span class="pre">alpha</span></code> (default set to 0.01) controlling regularization
+strength can be passed as keyword argument, see
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.Ridge</span></code> for more information.</p></li>
+</ul>
+</li>
+</ul>
 </p></li>
 <li><p><strong>loss_function</strong> ({<code class="docutils literal notranslate"><span class="pre">&quot;ls&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;ML-poisson&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;huber&quot;</span></code>, callable}, default <code class="docutils literal notranslate"><span class="pre">&quot;ls&quot;</span></code>) – <p>The loss function to use for minimization. Only <code class="docutils literal notranslate"><span class="pre">&quot;ls&quot;</span></code> is available
 if <code class="docutils literal notranslate"><span class="pre">optimizer</span></code> is one of <code class="docutils literal notranslate"><span class="pre">&quot;lm&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;trf&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;dogbox&quot;</span></code> or <code class="docutils literal notranslate"><span class="pre">&quot;odr&quot;</span></code>.</p>
@@ -1102,8 +1121,8 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <div class="admonition seealso">
 <p class="admonition-title">See also</p>
 <ul class="simple">
-<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.fit" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">fit()</span></code></a></p></li>
-<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.multifit" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">multifit()</span></code></a></p></li>
+<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.fit" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">fit()</span></code></a></p></li>
+<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.multifit" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">multifit()</span></code></a></p></li>
 <li><p><code class="xref py py-meth docutils literal notranslate"><span class="pre">smart_fit()</span></code></p></li>
 </ul>
 </div>
@@ -1317,6 +1336,8 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 given value.</p></li>
 <li><p><strong>optimizer</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a><em> or </em><em>None</em><em>, </em><em>default None</em>) – <p>The optimization algorithm used to perform the fitting.</p>
 <ul>
+<li><p>Non-linear optimizers:</p>
+<ul>
 <li><p><code class="docutils literal notranslate"><span class="pre">&quot;lm&quot;</span></code> performs least-squares optimization using the
 Levenberg-Marquardt algorithm, and supports bounds
 on parameters.</p></li>
@@ -1330,7 +1351,7 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 distance regression (ODR) algorithm. It does not support
 bounds on parameters. See <code class="xref py py-mod docutils literal notranslate"><span class="pre">scipy.odr</span></code> for more details.</p></li>
 <li><p>All of the available methods for <code class="xref py py-func docutils literal notranslate"><span class="pre">scipy.optimize.minimize()</span></code>
-can be used here. See the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/model/fitting_model.html#model-fitting" title="(in HyperSpy v2.1)"><span class="xref std std-ref">User Guide</span></a>
+can be used here. See the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/model/fitting_model.html#model-fitting" title="(in HyperSpy v2.2)"><span class="xref std std-ref">User Guide</span></a>
 documentation for more details.</p></li>
 <li><p><code class="docutils literal notranslate"><span class="pre">&quot;Differential</span> <span class="pre">Evolution&quot;</span></code> is a global optimization method.
 It does support bounds on parameters. See
@@ -1345,6 +1366,23 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <code class="xref py py-func docutils literal notranslate"><span class="pre">scipy.optimize.shgo()</span></code> for more details on available
 options. Requires <code class="docutils literal notranslate"><span class="pre">scipy</span> <span class="pre">&gt;=</span> <span class="pre">1.2.0</span></code>.</p></li>
 </ul>
+</li>
+<li><p>Linear optimizers:</p>
+<ul>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;lstsq&quot;</span></code> - least square using <a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.linalg.lstsq.html#numpy.linalg.lstsq" title="(in NumPy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">numpy.linalg.lstsq()</span></code></a>.</p></li>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;ols&quot;</span></code> - Ordinary least square using
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.LinearRegression</span></code></p></li>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;nnls&quot;</span></code> - Linear regression with positive constraints on the
+regression coefficients using
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.LinearRegression</span></code></p></li>
+<li><p><code class="docutils literal notranslate"><span class="pre">&quot;ridge&quot;</span></code> - least square supporting regularisation using
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.Ridge</span></code>. The parameter
+<code class="docutils literal notranslate"><span class="pre">alpha</span></code> (default set to 0.01) controlling regularization
+strength can be passed as keyword argument, see
+<code class="xref py py-class docutils literal notranslate"><span class="pre">sklearn.linear_model.Ridge</span></code> for more information.</p></li>
+</ul>
+</li>
+</ul>
 </p></li>
 <li><p><strong>loss_function</strong> ({<code class="docutils literal notranslate"><span class="pre">&quot;ls&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;ML-poisson&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;huber&quot;</span></code>, callable}, default <code class="docutils literal notranslate"><span class="pre">&quot;ls&quot;</span></code>) – <p>The loss function to use for minimization. Only <code class="docutils literal notranslate"><span class="pre">&quot;ls&quot;</span></code> is available
 if <code class="docutils literal notranslate"><span class="pre">optimizer</span></code> is one of <code class="docutils literal notranslate"><span class="pre">&quot;lm&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;trf&quot;</span></code>, <code class="docutils literal notranslate"><span class="pre">&quot;dogbox&quot;</span></code> or <code class="docutils literal notranslate"><span class="pre">&quot;odr&quot;</span></code>.</p>
@@ -1395,8 +1433,8 @@ <h1><a class="reference internal" href="#module-exspy.models" title="exspy.model
 <div class="admonition seealso">
 <p class="admonition-title">See also</p>
 <ul class="simple">
-<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.fit" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">fit()</span></code></a></p></li>
-<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.multifit" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">multifit()</span></code></a></p></li>
+<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.fit" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">fit()</span></code></a></p></li>
+<li><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.multifit" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">multifit()</span></code></a></p></li>
 <li><p><code class="xref py py-meth docutils literal notranslate"><span class="pre">fit()</span></code></p></li>
 </ul>
 </div>
diff --git a/reference/signals.html b/reference/signals.html
index b6a16cdf1..a04f23dcc 100644
--- a/reference/signals.html
+++ b/reference/signals.html
@@ -504,7 +504,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.signals.DielectricFunction">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.signals.</span></span><span class="sig-name descname"><span class="pre">DielectricFunction</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.DielectricFunction" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal1D.html#hyperspy.api.signals.ComplexSignal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">ComplexSignal1D</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal1D.html#hyperspy.api.signals.ComplexSignal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">ComplexSignal1D</span></code></a></p>
 <p>Signal class for dielectric functions.</p>
 <p>Create a signal instance.</p>
 <dl class="field-list simple">
@@ -512,7 +512,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -536,21 +536,21 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>zlp</strong> (float or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a>) – If the ZLP is the same for all spectra, the intengral of the ZLP
+<li><p><strong>zlp</strong> (float or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a>) – If the ZLP is the same for all spectra, the intengral of the ZLP
 can be provided as a number. Otherwise, if the ZLP intensity is not
 the same for all spectra, it can be provided as i) a Signal
 of the same dimensions as the current signal containing the ZLP
 spectra for each location ii) a Signal of signal dimension 0
 and navigation_dimension equal to the current signal containing the
 integrated ZLP intensity.</p></li>
-<li><p><strong>t</strong> (None, float or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a>) – The sample thickness in nm. If the thickness is the same for all
+<li><p><strong>t</strong> (None, float or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a>) – The sample thickness in nm. If the thickness is the same for all
 spectra it can be given by a number. Otherwise, it can be provided
 as a Signal with signal dimension 0 and navigation_dimension equal
 to the current signal.</p></li>
 </ul>
 </dd>
 <dt class="field-even">Return type<span class="colon">:</span></dt>
-<dd class="field-even"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a></p>
+<dd class="field-even"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a></p>
 </dd>
 </dl>
 </dd></dl>
@@ -580,7 +580,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 signal.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.Signal1D</span></code></a></p>
+<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.Signal1D</span></code></a></p>
 </dd>
 </dl>
 <p class="rubric">Notes</p>
@@ -606,7 +606,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -724,7 +724,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.signals.EDSSpectrum">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.signals.</span></span><span class="sig-name descname"><span class="pre">EDSSpectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwards</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.EDSSpectrum" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Signal1D</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Signal1D</span></code></a></p>
 <p>General signal class for EDS spectra.</p>
 <p>Create a signal instance.</p>
 <dl class="field-list simple">
@@ -732,7 +732,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -1074,7 +1074,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 ‘estimate_integration_windows’.
 Else provide an array for which each row corresponds to a X-ray
 line. Each row contains the left and right value of the window.</p></li>
-<li><p><strong>navigator</strong> (str, None, or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass).)</p></li>
+<li><p><strong>navigator</strong> (str, None, or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass).)</p></li>
 <li><p><strong>'auto'</strong> (<em>Allowed string values are</em>) – <ul>
 <li><p>If <code class="docutils literal notranslate"><span class="pre">'auto'</span></code>:</p>
 <ul>
@@ -1117,7 +1117,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 </li>
 <li><p>If <code class="docutils literal notranslate"><span class="pre">None</span></code>, no navigator will be provided.</p></li>
 </ul>
-<p>Alternatively a <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)
+<p>Alternatively a <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)
 instance can be provided. The navigation or signal shape must
 match the navigation shape of the signal to plot or the
 <code class="docutils literal notranslate"><span class="pre">navigation_shape</span></code> + <code class="docutils literal notranslate"><span class="pre">signal_shape</span></code> must be equal to the
@@ -1167,7 +1167,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 </li>
 <li><p>If <code class="docutils literal notranslate"><span class="pre">None</span></code>, no navigator will be provided.</p></li>
 </ul>
-<p>Alternatively a <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)
+<p>Alternatively a <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)
 instance can be provided. The navigation or signal shape must
 match the navigation shape of the signal to plot or the
 <code class="docutils literal notranslate"><span class="pre">navigation_shape</span></code> + <code class="docutils literal notranslate"><span class="pre">signal_shape</span></code> must be equal to the
@@ -1217,7 +1217,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 </li>
 <li><p>If <code class="docutils literal notranslate"><span class="pre">None</span></code>, no navigator will be provided.</p></li>
 </ul>
-<p>Alternatively a <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)
+<p>Alternatively a <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)
 instance can be provided. The navigation or signal shape must
 match the navigation shape of the signal to plot or the
 <code class="docutils literal notranslate"><span class="pre">navigation_shape</span></code> + <code class="docutils literal notranslate"><span class="pre">signal_shape</span></code> must be equal to the
@@ -1225,7 +1225,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 If the signal <code class="docutils literal notranslate"><span class="pre">dtype</span></code> is RGB or RGBA this parameter has no effect and
 the value is always set to <code class="docutils literal notranslate"><span class="pre">'slider'</span></code>.</p>
 </p></li>
-<li><p><strong>axes_manager</strong> (None or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>) – If None, the signal’s <code class="docutils literal notranslate"><span class="pre">axes_manager</span></code> attribute is used.</p></li>
+<li><p><strong>axes_manager</strong> (None or <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>) – If None, the signal’s <code class="docutils literal notranslate"><span class="pre">axes_manager</span></code> attribute is used.</p></li>
 <li><p><strong>plot_markers</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#bool" title="(in Python v3.13)"><em>bool</em></a><em>, </em><em>default True</em>) – Plot markers added using <cite>s.add_marker(marker, permanent=True)</cite>.
 Note, a large number of markers might lead to very slow plotting.</p></li>
 <li><p><strong>navigator_kwds</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a>) – Only for image navigator, additional keyword arguments for
@@ -1306,7 +1306,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <li><p><strong>dtype</strong> (<em>{None</em><em>, </em><a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.dtype.html#numpy.dtype" title="(in NumPy v2.1)"><em>numpy.dtype</em></a><em>, </em><em>&quot;same&quot;}</em>) – Specify the dtype of the output. If None, the dtype will be
 determined by the behaviour of <a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.sum.html#numpy.sum" title="(in NumPy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">numpy.sum()</span></code></a>, if <code class="docutils literal notranslate"><span class="pre">&quot;same&quot;</span></code>,
 the dtype will be kept the same. Default is None.</p></li>
-<li><p><strong>out</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass) or None) – If <code class="docutils literal notranslate"><span class="pre">None</span></code>, a new Signal is created with the result of the
+<li><p><strong>out</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass) or None) – If <code class="docutils literal notranslate"><span class="pre">None</span></code>, a new Signal is created with the result of the
 operation and returned (default). If a Signal is passed,
 it is used to receive the output of the operation, and nothing is
 returned.</p></li>
@@ -1316,7 +1316,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-even"><p>The resulting cropped signal.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><em>BaseSignal</em></a></p>
+<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><em>BaseSignal</em></a></p>
 </dd>
 <dt class="field-even">Raises<span class="colon">:</span></dt>
 <dd class="field-even"><p><a class="reference external" href="https://docs.python.org/3/library/exceptions.html#NotImplementedError" title="(in Python v3.13)"><strong>NotImplementedError</strong></a> – If trying to rebin over a non-uniform axis.</p>
@@ -1451,12 +1451,13 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>axis</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#int" title="(in Python v3.13)"><code class="xref py py-class docutils literal notranslate"><span class="pre">int</span></code></a>, <a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><code class="xref py py-class docutils literal notranslate"><span class="pre">str</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.DataAxis" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">DataAxis</span></code></a> or tuple) – Either one on its own, or many axes in a tuple can be passed. In
-both cases the axes can be passed directly, or specified using the
-index in <cite>axes_manager</cite> or the name of the axis. Any duplicates are
-removed. If <code class="docutils literal notranslate"><span class="pre">None</span></code>, the operation is performed over all navigation
-axes (default).</p></li>
-<li><p><strong>out</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass) or None) – If <code class="docutils literal notranslate"><span class="pre">None</span></code>, a new Signal is created with the result of the
+<li><p><strong>axis</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#int" title="(in Python v3.13)"><code class="xref py py-class docutils literal notranslate"><span class="pre">int</span></code></a>, <a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><code class="xref py py-class docutils literal notranslate"><span class="pre">str</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.DataAxis" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">DataAxis</span></code></a> or tuple) – Either a single or multiple axes in a tuple can be passed. In
+both cases, the axes can be passed directly, or specified using the
+index in <code class="docutils literal notranslate"><span class="pre">axes_manager</span></code> or the <em>name of the axis</em>. Any duplicates are
+removed. If <code class="docutils literal notranslate"><span class="pre">&quot;sig&quot;</span></code> or <code class="docutils literal notranslate"><span class="pre">&quot;nav&quot;</span></code>, the signal or navigation axes
+will be used, respectively. If <code class="docutils literal notranslate"><span class="pre">None</span></code>, the operation is performed
+over all navigation axes (default).</p></li>
+<li><p><strong>out</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass) or None) – If <code class="docutils literal notranslate"><span class="pre">None</span></code>, a new Signal is created with the result of the
 operation and returned (default). If a Signal is passed,
 it is used to receive the output of the operation, and nothing is
 returned.</p></li>
@@ -1471,7 +1472,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 specified axes.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><em>BaseSignal</em></a></p>
+<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><em>BaseSignal</em></a></p>
 </dd>
 </dl>
 <p class="rubric">Notes</p>
@@ -1507,7 +1508,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -1532,7 +1533,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>weight_percent</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)) – Stack of compositions as determined from an initial k_factor
+<li><p><strong>weight_percent</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass)) – Stack of compositions as determined from an initial k_factor
 quantification.</p></li>
 <li><p><strong>thickness</strong> (float or <a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">numpy.ndarray</span></code></a>) – Either a float value for thickness in nm or an array equal to the
 size of the EDX map with thickness at each position of the sample.</p></li>
@@ -1577,7 +1578,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <span class="sig-name descname"><span class="pre">decomposition</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">normalize_poissonian_noise</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">navigation_mask</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">closing</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.EDSTEMSpectrum.decomposition" title="Link to this definition">#</a></dt>
 <dd><p>Apply a decomposition to a dataset with a choice of algorithms.</p>
 <p>The results are stored in <code class="docutils literal notranslate"><span class="pre">self.learning_results</span></code>.</p>
-<p>Read more in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/mva/decomposition.html#mva-decomposition" title="(in HyperSpy v2.1)"><span class="xref std std-ref">User Guide</span></a>.</p>
+<p>Read more in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/mva/decomposition.html#mva-decomposition" title="(in HyperSpy v2.2)"><span class="xref std std-ref">User Guide</span></a>.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
@@ -1898,7 +1899,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.signals.EELSSpectrum">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.signals.</span></span><span class="sig-name descname"><span class="pre">EELSSpectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.EELSSpectrum" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Signal1D</span></code></a></p>
+<dd><p>Bases: <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">Signal1D</span></code></a></p>
 <p>Signal class for EELS spectra.</p>
 <p>Create a signal instance.</p>
 <dl class="field-list simple">
@@ -1906,7 +1907,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -2533,7 +2534,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <li><p><strong>dtype</strong> (<em>{None</em><em>, </em><a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.dtype.html#numpy.dtype" title="(in NumPy v2.1)"><em>numpy.dtype</em></a><em>, </em><em>&quot;same&quot;}</em>) – Specify the dtype of the output. If None, the dtype will be
 determined by the behaviour of <a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.sum.html#numpy.sum" title="(in NumPy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">numpy.sum()</span></code></a>, if <code class="docutils literal notranslate"><span class="pre">&quot;same&quot;</span></code>,
 the dtype will be kept the same. Default is None.</p></li>
-<li><p><strong>out</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass) or None) – If <code class="docutils literal notranslate"><span class="pre">None</span></code>, a new Signal is created with the result of the
+<li><p><strong>out</strong> (<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">BaseSignal</span></code></a> (or subclass) or None) – If <code class="docutils literal notranslate"><span class="pre">None</span></code>, a new Signal is created with the result of the
 operation and returned (default). If a Signal is passed,
 it is used to receive the output of the operation, and nothing is
 returned.</p></li>
@@ -2543,7 +2544,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-even"><p>The resulting cropped signal.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><em>BaseSignal</em></a></p>
+<dd class="field-odd"><p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><em>BaseSignal</em></a></p>
 </dd>
 <dt class="field-even">Raises<span class="colon">:</span></dt>
 <dd class="field-even"><p><a class="reference external" href="https://docs.python.org/3/library/exceptions.html#NotImplementedError" title="(in Python v3.13)"><strong>NotImplementedError</strong></a> – If trying to rebin over a non-uniform axis.</p>
@@ -2667,7 +2668,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 provided value as width of the zero loss peak mask.
 Default is None.</p></li>
 <li><p><strong>**kwargs</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a>) – Keyword arguments pass to
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.get_histogram" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">get_histogram()</span></code></a></p></li>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.get_histogram" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">get_histogram()</span></code></a></p></li>
 </ul>
 </dd>
 </dl>
@@ -2693,7 +2694,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <li><p><strong>threshold</strong> (<code class="docutils literal notranslate"><span class="pre">'auto'</span></code> or int) – if <code class="docutils literal notranslate"><span class="pre">int</span></code> set the threshold value use for the detecting the spikes.
 If <code class="docutils literal notranslate"><span class="pre">&quot;auto&quot;</span></code>, determine the threshold value as being the first zero
 value in the histogram obtained from the
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.spikes_diagnosis" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">spikes_diagnosis()</span></code></a>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.spikes_diagnosis" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">spikes_diagnosis()</span></code></a>
 method.</p></li>
 <li><p><strong>zero_loss_peak_mask_width</strong> (<em>None</em><em> or </em><a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.13)"><em>float</em></a>) – If None, the zero loss peak is not masked, otherwise, use the
 provided value as width of the zero loss peak mask.
@@ -2716,7 +2717,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 </dl>
 <div class="admonition seealso">
 <p class="admonition-title">See also</p>
-<p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.spikes_diagnosis" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">spikes_diagnosis()</span></code></a></p>
+<p><a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.spikes_diagnosis" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">spikes_diagnosis()</span></code></a></p>
 </div>
 </dd></dl>
 
@@ -2750,7 +2751,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.signals.LazyDielectricFunction">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.signals.</span></span><span class="sig-name descname"><span class="pre">LazyDielectricFunction</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.LazyDielectricFunction" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference internal" href="#exspy.signals.DielectricFunction" title="exspy.signals.dielectric_function.DielectricFunction"><code class="xref py py-class docutils literal notranslate"><span class="pre">DielectricFunction</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/signal/LazyComplexSignal1D.html#hyperspy._lazy_signals.LazyComplexSignal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">LazyComplexSignal1D</span></code></a></p>
+<dd><p>Bases: <a class="reference internal" href="#exspy.signals.DielectricFunction" title="exspy.signals.dielectric_function.DielectricFunction"><code class="xref py py-class docutils literal notranslate"><span class="pre">DielectricFunction</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/signal/LazyComplexSignal1D.html#hyperspy._lazy_signals.LazyComplexSignal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">LazyComplexSignal1D</span></code></a></p>
 <p>Lazy signal class for dielectric functions.
 The computation is delayed until explicitly requested.</p>
 <p>This class is not expected to be instantiated directly, instead use:</p>
@@ -2764,7 +2765,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -2799,7 +2800,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -2820,7 +2821,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.signals.LazyEDSSpectrum">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.signals.</span></span><span class="sig-name descname"><span class="pre">LazyEDSSpectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwards</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.LazyEDSSpectrum" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference internal" href="#exspy.signals.EDSSpectrum" title="exspy.signals.eds.EDSSpectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">EDSSpectrum</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/signal/LazySignal1D.html#hyperspy._lazy_signals.LazySignal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">LazySignal1D</span></code></a></p>
+<dd><p>Bases: <a class="reference internal" href="#exspy.signals.EDSSpectrum" title="exspy.signals.eds.EDSSpectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">EDSSpectrum</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/signal/LazySignal1D.html#hyperspy._lazy_signals.LazySignal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">LazySignal1D</span></code></a></p>
 <p>Lazy general signal class for EDS spectra.
 The computation is delayed until explicitly requested.</p>
 <p>This class is not expected to be instantiated directly, instead use:</p>
@@ -2834,7 +2835,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -2869,7 +2870,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
@@ -2890,7 +2891,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dl class="py class">
 <dt class="sig sig-object py" id="exspy.signals.LazyEELSSpectrum">
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">exspy.signals.</span></span><span class="sig-name descname"><span class="pre">LazyEELSSpectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#exspy.signals.LazyEELSSpectrum" title="Link to this definition">#</a></dt>
-<dd><p>Bases: <a class="reference internal" href="#exspy.signals.EELSSpectrum" title="exspy.signals.eels.EELSSpectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">EELSSpectrum</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/signal/LazySignal1D.html#hyperspy._lazy_signals.LazySignal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">LazySignal1D</span></code></a></p>
+<dd><p>Bases: <a class="reference internal" href="#exspy.signals.EELSSpectrum" title="exspy.signals.eels.EELSSpectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">EELSSpectrum</span></code></a>, <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/signal/LazySignal1D.html#hyperspy._lazy_signals.LazySignal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">LazySignal1D</span></code></a></p>
 <p>Lazy signal class for EELS spectra.
 The computation is delayed until explicitly requested.</p>
 <p>This class is not expected to be instantiated directly, instead use:</p>
@@ -2904,7 +2905,7 @@ <h1><a class="reference internal" href="#module-exspy.signals" title="exspy.sign
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>data</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – The signal data. It can be an array of any dimensions.</p></li>
 <li><p><strong>axes</strong> (<em>[</em><em>dict/axes</em><em>]</em><em>, </em><em>optional</em>) – List of either dictionaries or axes objects to define the axes (see
-the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
+the documentation of the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">AxesManager</span></code></a>
 class for more details).</p></li>
 <li><p><strong>attributes</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary whose items are stored as attributes.</p></li>
 <li><p><strong>metadata</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.13)"><em>dict</em></a><em>, </em><em>optional</em>) – A dictionary containing a set of parameters
diff --git a/searchindex.js b/searchindex.js
index 423afed3d..73291bd9b 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
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10], "write": 8, "x": 22, "zero": 23}})
\ No newline at end of file
diff --git a/sg_execution_times.html b/sg_execution_times.html
index 8b333940a..bfbdf5727 100644
--- a/sg_execution_times.html
+++ b/sg_execution_times.html
@@ -421,7 +421,7 @@
                   
   <section id="computation-times">
 <span id="sphx-glr-sg-execution-times"></span><h1>Computation times<a class="headerlink" href="#computation-times" title="Link to this heading">#</a></h1>
-<p><strong>00:18.192</strong> total execution time for 3 files <strong>from all galleries</strong>:</p>
+<p><strong>00:22.018</strong> total execution time for 3 files <strong>from all galleries</strong>:</p>
 <div class="docutils container">
 <style scoped>
 <link href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/5.3.0/css/bootstrap.min.css" rel="stylesheet" />
@@ -443,15 +443,15 @@
 </thead>
 <tbody>
 <tr class="row-even"><td><p><a class="reference internal" href="auto_examples/model_fitting/EELS_curve_fitting.html#sphx-glr-auto-examples-model-fitting-eels-curve-fitting-py"><span class="std std-ref">EELS curve fitting</span></a> (<code class="docutils literal notranslate"><span class="pre">../examples/model_fitting/EELS_curve_fitting.py</span></code>)</p></td>
-<td><p>00:17.367</p></td>
+<td><p>00:21.185</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="auto_examples/model_fitting/plot_residual.html#sphx-glr-auto-examples-model-fitting-plot-residual-py"><span class="std std-ref">Plot Residual</span></a> (<code class="docutils literal notranslate"><span class="pre">../examples/model_fitting/plot_residual.py</span></code>)</p></td>
-<td><p>00:00.477</p></td>
+<td><p>00:00.489</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="auto_examples/model_fitting/simple_arctan_fit.html#sphx-glr-auto-examples-model-fitting-simple-arctan-fit-py"><span class="std std-ref">Simple arctan fit</span></a> (<code class="docutils literal notranslate"><span class="pre">../examples/model_fitting/simple_arctan_fit.py</span></code>)</p></td>
-<td><p>00:00.348</p></td>
+<td><p>00:00.343</p></td>
 <td><p>0.0</p></td>
 </tr>
 </tbody>
diff --git a/user_guide/dielectric_function.html b/user_guide/dielectric_function.html
index 37f85070b..7edcff939 100644
--- a/user_guide/dielectric_function.html
+++ b/user_guide/dielectric_function.html
@@ -443,9 +443,9 @@
   <section id="dielectric-function-tools">
 <span id="dielectric-function-label"></span><h1>Dielectric function tools<a class="headerlink" href="#dielectric-function-tools" title="Link to this heading">#</a></h1>
 <p>The <a class="reference internal" href="../reference/signals.html#exspy.signals.DielectricFunction" title="exspy.signals.DielectricFunction"><code class="xref py py-class docutils literal notranslate"><span class="pre">DielectricFunction</span></code></a> class
-inherits from <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal.html#hyperspy.api.signals.ComplexSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.ComplexSignal</span></code></a> and can
+inherits from <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal.html#hyperspy.api.signals.ComplexSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.ComplexSignal</span></code></a> and can
 thus access complex properties. To convert a
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal.html#hyperspy.api.signals.ComplexSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.ComplexSignal</span></code></a> to a
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal.html#hyperspy.api.signals.ComplexSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.ComplexSignal</span></code></a> to a
 <a class="reference internal" href="../reference/signals.html#exspy.signals.DielectricFunction" title="exspy.signals.DielectricFunction"><code class="xref py py-class docutils literal notranslate"><span class="pre">DielectricFunction</span></code></a>,
 make sure that the signal dimension and signal type are properly set:</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">set_signal_type</span><span class="p">(</span><span class="s1">&#39;DielectricFunction&#39;</span><span class="p">)</span>
@@ -453,7 +453,7 @@
 </div>
 <p>Note that <a class="reference internal" href="../reference/signals.html#exspy.signals.DielectricFunction" title="exspy.signals.DielectricFunction"><code class="xref py py-class docutils literal notranslate"><span class="pre">DielectricFunction</span></code></a> is
 complex and therefore is a subclass of
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal1D.html#hyperspy.api.signals.ComplexSignal1D" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.ComplexSignal1D</span></code></a>.</p>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/ComplexSignal1D.html#hyperspy.api.signals.ComplexSignal1D" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.ComplexSignal1D</span></code></a>.</p>
 <section id="number-of-effective-electrons">
 <h2>Number of effective electrons<a class="headerlink" href="#number-of-effective-electrons" title="Link to this heading">#</a></h2>
 <p>The Bethe f-sum rule gives rise to two definitions of the effective number (see
diff --git a/user_guide/eds.html b/user_guide/eds.html
index f52b105af..9604ac85c 100644
--- a/user_guide/eds.html
+++ b/user_guide/eds.html
@@ -469,8 +469,8 @@ <h2>Spectrum loading and parameters<a class="headerlink" href="#spectrum-loading
 </div>
 <section id="loading-data">
 <h3>Loading data<a class="headerlink" href="#loading-data" title="Link to this heading">#</a></h3>
-<p>All data are loaded with the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.html#hyperspy.api.load" title="(in HyperSpy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">hyperspy.api.load()</span></code></a> function, as described in
-detail in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/io.html#loading-files" title="(in HyperSpy v2.1)"><span class="xref std std-ref">loading files</span></a> of the HyperSpy
+<p>All data are loaded with the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.html#hyperspy.api.load" title="(in HyperSpy v2.2)"><code class="xref py py-func docutils literal notranslate"><span class="pre">hyperspy.api.load()</span></code></a> function, as described in
+detail in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/io.html#loading-files" title="(in HyperSpy v2.2)"><span class="xref std std-ref">loading files</span></a> of the HyperSpy
 documentation. HyperSpy is able to import different formats, among them
 <a class="reference external" href="https://hyperspy.org/rosettasciio/user_guide/supported_formats/msa.html#msa-format" title="(in RosettaSciIO)"><span class="xref std std-ref">msa</span></a> and <a class="reference external" href="https://hyperspy.org/rosettasciio/user_guide/supported_formats/ripple.html#ripple-format" title="(in RosettaSciIO)"><span class="xref std std-ref">rpl</span></a>
 (the raw format of Oxford Instruments and Bruker).</p>
@@ -482,7 +482,7 @@ <h3>Loading data<a class="headerlink" href="#loading-data" title="Link to this h
 </pre></div>
 </div>
 <p>For a spectrum image (The .rpl file is recorded as an image in this example,
-The method <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.as_signal1D" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.as_signal1D()</span></code></a> set it back to a one
+The method <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.as_signal1D" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.as_signal1D()</span></code></a> set it back to a one
 dimensional signal with the energy axis in first position):</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">si</span> <span class="o">=</span> <span class="n">hs</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="s2">&quot;Ni_superalloy_010.rpl&quot;</span><span class="p">)</span><span class="o">.</span><span class="n">as_signal1D</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">si</span>
@@ -500,7 +500,7 @@ <h3>Loading data<a class="headerlink" href="#loading-data" title="Link to this h
 <section id="microscope-and-detector-parameters">
 <span id="eds-calibration-label"></span><h3>Microscope and detector parameters<a class="headerlink" href="#microscope-and-detector-parameters" title="Link to this heading">#</a></h3>
 <p>First, the signal type (“EDS_TEM” or “EDS_SEM”) needs to be set with the
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.set_signal_type" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.set_signal_type()</span></code></a> method. By assigning the
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.set_signal_type" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.set_signal_type()</span></code></a> method. By assigning the
 class of the object, specific EDS methods are made available.</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">hs</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="s2">&quot;Ni_superalloy_1pix.msa&quot;</span><span class="p">)</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">set_signal_type</span><span class="p">(</span><span class="s2">&quot;EDS_SEM&quot;</span><span class="p">)</span>
@@ -509,14 +509,14 @@ <h3>Loading data<a class="headerlink" href="#loading-data" title="Link to this h
 </pre></div>
 </div>
 <p>You can also specify the signal type as an argument of
-the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.html#hyperspy.api.load" title="(in HyperSpy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">hyperspy.api.load()</span></code></a> function:</p>
+the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.html#hyperspy.api.load" title="(in HyperSpy v2.2)"><code class="xref py py-func docutils literal notranslate"><span class="pre">hyperspy.api.load()</span></code></a> function:</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">hs</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="s2">&quot;Ni_superalloy_1pix.msa&quot;</span><span class="p">,</span> <span class="n">signal_type</span><span class="o">=</span><span class="s2">&quot;EDS_SEM&quot;</span><span class="p">)</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">s</span>
 <span class="go">&lt;EDSSEMSpectrum, title: Signal1D, dimensions: (|1024)&gt;</span>
 </pre></div>
 </div>
 <p>HyperSpy will automatically load any existing  microscope parameters from the
-file, and store them in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.metadata" title="(in HyperSpy v2.1)"><code class="xref py py-attr docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.metadata</span></code></a>
+file, and store them in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.metadata" title="(in HyperSpy v2.2)"><code class="xref py py-attr docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.metadata</span></code></a>
 attribute (see <a class="reference internal" href="metadata_structure.html#metadata-structure"><span class="std std-ref">eXSpy Metadata Structure</span></a>). These parameters can be displayed
 as follows:</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">hs</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="s2">&quot;Ni_superalloy_1pix.msa&quot;</span><span class="p">,</span> <span class="n">signal_type</span><span class="o">=</span><span class="s2">&quot;EDS_SEM&quot;</span><span class="p">)</span>
@@ -558,7 +558,7 @@ <h3>Loading data<a class="headerlink" href="#loading-data" title="Link to this h
 </figure>
 <p>Any microscope and detector parameters that are not found in the imported file
 will be set by default. These default values can be changed in the
-<code class="xref py py-class docutils literal notranslate"><span class="pre">Preferences</span></code> class (see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/basic_usage.html#configuring-hyperspy-label" title="(in HyperSpy v2.1)"><span class="xref std std-ref">preferences</span></a>).</p>
+<code class="xref py py-class docutils literal notranslate"><span class="pre">Preferences</span></code> class (see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/basic_usage.html#configuring-hyperspy-label" title="(in HyperSpy v2.2)"><span class="xref std std-ref">preferences</span></a>).</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">exspy</span><span class="o">.</span><span class="n">preferences</span><span class="o">.</span><span class="n">EDS</span><span class="o">.</span><span class="n">eds_detector_elevation</span> <span class="o">=</span> <span class="mi">37</span>
 </pre></div>
 </div>
@@ -578,8 +578,8 @@ <h3>Loading data<a class="headerlink" href="#loading-data" title="Link to this h
 <h3>Energy axis<a class="headerlink" href="#energy-axis" title="Link to this heading">#</a></h3>
 <p>The size, scale and units of the energy axis are automatically imported from
 the imported file, where they exist. These properties can also be set
-or adjusted manually with the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.axes.AxesManager</span></code></a>
-(see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/axes.html#setting-axis-properties" title="(in HyperSpy v2.1)"><span class="xref std std-ref">Axis properties</span></a> for more info):</p>
+or adjusted manually with the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/base_classes/axes.html#hyperspy.axes.AxesManager" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.axes.AxesManager</span></code></a>
+(see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/axes.html#setting-axis-properties" title="(in HyperSpy v2.2)"><span class="xref std std-ref">Axis properties</span></a> for more info):</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">si</span> <span class="o">=</span> <span class="n">hs</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="s2">&quot;Ni_superalloy_010.rpl&quot;</span><span class="p">,</span>
 <span class="gp">... </span>             <span class="n">signal_type</span><span class="o">=</span><span class="s2">&quot;EDS_TEM&quot;</span><span class="p">)</span><span class="o">.</span><span class="n">as_signal1D</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">si</span><span class="o">.</span><span class="n">axes_manager</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">name</span> <span class="o">=</span> <span class="s1">&#39;E&#39;</span>
@@ -621,7 +621,7 @@ <h3>Copying spectrum calibration<a class="headerlink" href="#copying-spectrum-ca
 <section id="describing-the-sample">
 <span id="eds-sample-label"></span><h2>Describing the sample<a class="headerlink" href="#describing-the-sample" title="Link to this heading">#</a></h2>
 <p>The description of the sample is also stored in the
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.metadata" title="(in HyperSpy v2.1)"><code class="xref py py-attr docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.metadata</span></code></a> attribute. It can be displayed using:</p>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.metadata" title="(in HyperSpy v2.2)"><code class="xref py py-attr docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.metadata</span></code></a> attribute. It can be displayed using:</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">exspy</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">EDS_TEM_FePt_nanoparticles</span><span class="p">()</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">add_lines</span><span class="p">()</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">metadata</span><span class="o">.</span><span class="n">Sample</span><span class="o">.</span><span class="n">thickness</span> <span class="o">=</span> <span class="mi">100</span>
@@ -746,7 +746,7 @@ <h3>Finding elements from energy<a class="headerlink" href="#finding-elements-fr
 <span id="eds-plot-label"></span><h2>Plotting<a class="headerlink" href="#plotting" title="Link to this heading">#</a></h2>
 <p>You can visualize an EDS spectrum using the
 <a class="reference internal" href="../reference/signals.html#exspy.signals.EDSSpectrum.plot" title="exspy.signals.EDSSpectrum.plot"><code class="xref py py-meth docutils literal notranslate"><span class="pre">plot()</span></code></a> method (see
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/visualisation.html#visualization-label" title="(in HyperSpy v2.1)"><span class="xref std std-ref">visualisation</span></a>). For example:</p>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/visualisation.html#visualization-label" title="(in HyperSpy v2.2)"><span class="xref std std-ref">visualisation</span></a>). For example:</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">exspy</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">EDS_SEM_TM002</span><span class="p">()</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">plot</span><span class="p">()</span>
 </pre></div>
@@ -759,7 +759,7 @@ <h3>Finding elements from energy<a class="headerlink" href="#finding-elements-fr
 </figcaption>
 </figure>
 <p>An example of multi-dimensional EDS data (e.g. 3D SEM-EDS) is given in
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/visualisation.html#visualization-3d-eds-label" title="(in HyperSpy v2.1)"><span class="xref std std-ref">visualisation multi-dimension</span></a>.</p>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/visualisation.html#visualization-3d-eds-label" title="(in HyperSpy v2.2)"><span class="xref std std-ref">visualisation multi-dimension</span></a>.</p>
 <section id="plotting-x-ray-lines">
 <span id="eds-plot-markers-label"></span><h3>Plotting X-ray lines<a class="headerlink" href="#plotting-x-ray-lines" title="Link to this heading">#</a></h3>
 <p>X-ray lines can be added as plot labels with
@@ -822,8 +822,8 @@ <h3>Finding elements from energy<a class="headerlink" href="#finding-elements-fr
 </figcaption>
 </figure>
 <p>The X-ray lines defined in <a class="reference internal" href="metadata_structure.html#sample-metadata"><span class="std std-ref">metadata.Sample.Xray_lines</span></a> are used by default.
-The EDS maps can be plotted using <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.plot/index.html#hyperspy.api.plot.plot_images" title="(in HyperSpy v2.1)"><code class="xref py py-func docutils literal notranslate"><span class="pre">hyperspy.api.plot.plot_images()</span></code></a>,
-see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/visualisation.html#plot-images" title="(in HyperSpy v2.1)"><span class="xref std std-ref">plotting several images</span></a>
+The EDS maps can be plotted using <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.plot/index.html#hyperspy.api.plot.plot_images" title="(in HyperSpy v2.2)"><code class="xref py py-func docutils literal notranslate"><span class="pre">hyperspy.api.plot.plot_images()</span></code></a>,
+see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/visualisation.html#plot-images" title="(in HyperSpy v2.2)"><span class="xref std std-ref">plotting several images</span></a>
 for more information in setting plotting parameters.</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">hs</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="s1">&#39;core_shell.hdf5&#39;</span><span class="p">)</span>
 <span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">metadata</span><span class="o">.</span><span class="n">Sample</span>
@@ -1088,7 +1088,7 @@ <h3>Finding elements from energy<a class="headerlink" href="#finding-elements-fr
 This is a much more accurate approach for quantitative EDS and should be
 used where possible. The pixel width could either be added to the metadata
 by putting the pixel area in as the <code class="docutils literal notranslate"><span class="pre">probe_area</span></code> (above) or by calibrating
-the spectrum image (see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/axes.html#setting-axis-properties" title="(in HyperSpy v2.1)"><span>Setting axis properties</span></a>).</p>
+the spectrum image (see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/axes.html#setting-axis-properties" title="(in HyperSpy v2.2)"><span>Setting axis properties</span></a>).</p>
 <p>Either approach will provide an illumination area for the cross section
 quantification. If the pixel width is not set, the code will still run with the
 default value of 1 nm with a warning message to remind the user that this is
diff --git a/user_guide/eels.html b/user_guide/eels.html
index d46a22d37..bc6d9ae1e 100644
--- a/user_guide/eels.html
+++ b/user_guide/eels.html
@@ -445,7 +445,7 @@
 <span id="eels-tools-label"></span><h2>Tools for EELS data analysis<a class="headerlink" href="#tools-for-eels-data-analysis" title="Link to this heading">#</a></h2>
 <p>The functions described in this chapter are only available for the
 <a class="reference internal" href="../reference/signals.html#exspy.signals.EELSSpectrum" title="exspy.signals.EELSSpectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">EELSSpectrum</span></code></a> class. To transform a
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.1)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a> (or subclass) into an
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal" title="(in HyperSpy v2.2)"><code class="xref py py-class docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal</span></code></a> (or subclass) into an
 <a class="reference internal" href="../reference/signals.html#exspy.signals.EELSSpectrum" title="exspy.signals.EELSSpectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">EELSSpectrum</span></code></a>:</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span><span class="o">.</span><span class="n">set_signal_type</span><span class="p">(</span><span class="s2">&quot;EELS&quot;</span><span class="p">)</span> 
 </pre></div>
@@ -460,7 +460,7 @@
 archiving purposes or to use some feature (e.g. curve fitting) that requires
 this information.  The elemental composition of the sample can be declared
 using <a class="reference internal" href="../reference/signals.html#exspy.signals.EELSSpectrum.add_elements" title="exspy.signals.EELSSpectrum.add_elements"><code class="xref py py-meth docutils literal notranslate"><span class="pre">add_elements()</span></code></a>. The
-information is stored in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.metadata" title="(in HyperSpy v2.1)"><code class="xref py py-attr docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.metadata</span></code></a>
+information is stored in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/BaseSignal.html#hyperspy.api.signals.BaseSignal.metadata" title="(in HyperSpy v2.2)"><code class="xref py py-attr docutils literal notranslate"><span class="pre">hyperspy.api.signals.BaseSignal.metadata</span></code></a>
 attribute (see <a class="reference internal" href="metadata_structure.html#metadata-structure"><span class="std std-ref">eXSpy Metadata Structure</span></a>). This information is saved to file
 when saving in the hspy format (HyperSpy’s HDF5 specification).</p>
 <p>An utility function <code class="xref py py-meth docutils literal notranslate"><span class="pre">get_edges_near_energy()</span></code> can be
@@ -526,7 +526,7 @@
 estimate the thickness from a low-loss EELS spectrum using the log-ratio
 method. If the beam energy, collection angle, convergence angle and sample
 density are known, the absolute thickness is computed using the method in
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/bibliography.html#iakoubovskii2008" title="(in HyperSpy v2.1)"><span class="xref std std-ref">[Iakoubovskii2008]</span></a>. This includes the estimation of
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/bibliography.html#iakoubovskii2008" title="(in HyperSpy v2.2)"><span class="xref std std-ref">[Iakoubovskii2008]</span></a>. This includes the estimation of
 the inelastic mean free path (iMFP). For more accurate results, it is possible
 to input the iMFP of the material if known.  If the density and/or the iMFP are
 not known, the output is the thickness relative to the (unknown) iMFP without
@@ -538,10 +538,10 @@ <h3>Zero-loss peak centre and alignment<a class="headerlink" href="#zero-loss-pe
 <a class="reference internal" href="../reference/signals.html#exspy.signals.EELSSpectrum.estimate_zero_loss_peak_centre" title="exspy.signals.EELSSpectrum.estimate_zero_loss_peak_centre"><code class="xref py py-meth docutils literal notranslate"><span class="pre">estimate_zero_loss_peak_centre()</span></code></a>
 can be used to estimate the position of the zero-loss peak (ZLP). The method assumes
 that the ZLP is the most intense feature in the spectra. For a more general
-approach see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.find_peaks1D_ohaver" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.Signal1D.find_peaks1D_ohaver()</span></code></a>.</p>
+approach see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.find_peaks1D_ohaver" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.Signal1D.find_peaks1D_ohaver()</span></code></a>.</p>
 <p>The <a class="reference internal" href="../reference/signals.html#exspy.signals.EELSSpectrum.align_zero_loss_peak" title="exspy.signals.EELSSpectrum.align_zero_loss_peak"><code class="xref py py-meth docutils literal notranslate"><span class="pre">align_zero_loss_peak()</span></code></a> can
 align the ZLP with subpixel accuracy. It is more robust and easy to use for the task
-than <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.align1D" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.Signal1D.align1D()</span></code></a>. Note that it is
+than <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/api.signals/Signal1D.html#hyperspy.api.signals.Signal1D.align1D" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.api.signals.Signal1D.align1D()</span></code></a>. Note that it is
 possible to apply the same alignment to other spectra using the <code class="docutils literal notranslate"><span class="pre">also_align</span></code>
 argument. This can be useful e.g. to align core-loss spectra acquired
 quasi-simultaneously. If there are other features in the low loss signal
@@ -592,7 +592,7 @@ <h3>Estimate elastic scattering intensity<a class="headerlink" href="#estimate-e
 <span id="eels-fitting"></span><h2>EELS curve fitting<a class="headerlink" href="#eels-curve-fitting" title="Link to this heading">#</a></h2>
 <p>HyperSpy makes it really easy to quantify EELS core-loss spectra by curve
 fitting as it is shown in the next example of quantification of a boron nitride
-EELS spectrum from the <a class="reference external" href="https://eelsdb.eu/">EELS Data Base</a> (see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/io.html#example-data-label" title="(in HyperSpy v2.1)"><span>Loading example data and data from online databases</span></a>).</p>
+EELS spectrum from the <a class="reference external" href="https://eelsdb.eu/">EELS Data Base</a> (see <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/io.html#example-data-label" title="(in HyperSpy v2.2)"><span>Loading example data and data from online databases</span></a>).</p>
 <p>Load the core-loss and low-loss spectra</p>
 <div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">s</span> <span class="o">=</span> <span class="n">exspy</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">eelsdb</span><span class="p">(</span><span class="n">title</span><span class="o">=</span><span class="s2">&quot;Hexagonal Boron Nitride&quot;</span><span class="p">,</span>
 <span class="gp">... </span>                      <span class="n">spectrum_type</span><span class="o">=</span><span class="s2">&quot;coreloss&quot;</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
diff --git a/user_guide/install.html b/user_guide/install.html
index 75751d05c..a3ba16083 100644
--- a/user_guide/install.html
+++ b/user_guide/install.html
@@ -455,7 +455,7 @@ <h1>Installation<a class="headerlink" href="#installation" title="Link to this h
 <li><p><a class="reference internal" href="#conda"><span class="std std-ref">Installation using conda</span></a> (recommended if you are also working with other <em>python</em> packages).</p></li>
 <li><p><a class="reference internal" href="#pip"><span class="std std-ref">Installation using pip</span></a>.</p></li>
 <li><p>Installing the development version from <a class="reference external" href="https://github.com/hyperspy/exspy/">GitHub</a>.
-Refer to the appropriate section in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/install.html#install-dev" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy user guide</span></a> (replacing <code class="docutils literal notranslate"><span class="pre">hyperspy</span></code> by <code class="docutils literal notranslate"><span class="pre">exspy</span></code>).</p></li>
+Refer to the appropriate section in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/install.html#install-dev" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy user guide</span></a> (replacing <code class="docutils literal notranslate"><span class="pre">hyperspy</span></code> by <code class="docutils literal notranslate"><span class="pre">exspy</span></code>).</p></li>
 </ol>
 <section id="installation-using-conda">
 <span id="conda"></span><h2>Installation using conda<a class="headerlink" href="#installation-using-conda" title="Link to this heading">#</a></h2>
@@ -465,7 +465,7 @@ <h3>1. Creating a conda environment<a class="headerlink" href="#creating-a-conda
 <p>eXSpy requires Python 3 and <code class="docutils literal notranslate"><span class="pre">conda</span></code> – we suggest using the Python 3 version
 of <a class="reference external" href="https://conda-forge.org/miniforge/">Miniforge</a>.</p>
 <p>We recommend creating a new environment for the eXSpy package (or installing
-it in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/install.html#anaconda-install" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy</span></a>
+it in the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/install.html#anaconda-install" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy</span></a>
 environment, if you have one already). To create a new environment:</p>
 <ol class="arabic simple">
 <li><p>Load the miniforge prompt.</p></li>
@@ -487,7 +487,7 @@ <h3>2. Installing the package in the new environment<a class="headerlink" href="
 <div class="admonition note">
 <p class="admonition-title">Note</p>
 <p>If you run into trouble, check the more detailed documentation in the
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/install.html#anaconda-install" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy user guide</span></a>.</p>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/user_guide/install.html#anaconda-install" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy user guide</span></a>.</p>
 </div>
 </section>
 <section id="getting-started">
diff --git a/user_guide/metadata_structure.html b/user_guide/metadata_structure.html
index dc58a0d23..11eeacef3 100644
--- a/user_guide/metadata_structure.html
+++ b/user_guide/metadata_structure.html
@@ -441,9 +441,9 @@
                   
   <section id="exspy-metadata-structure">
 <span id="metadata-structure"></span><h1>eXSpy Metadata Structure<a class="headerlink" href="#exspy-metadata-structure" title="Link to this heading">#</a></h1>
-<p><strong>eXSpy</strong> extends the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#metadata-structure" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy metadata structure</span></a>
+<p><strong>eXSpy</strong> extends the <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#metadata-structure" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy metadata structure</span></a>
 with conventions for metadata specific to its signal types. Refer to the
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#metadata-structure" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy metadata documentation</span></a>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#metadata-structure" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy metadata documentation</span></a>
 for general metadata fields.</p>
 <p>The metadata of any <strong>signal objects</strong> is stored in the <code class="docutils literal notranslate"><span class="pre">metadata</span></code> attribute,
 which has a tree structure. By convention, the node labels are capitalized and
@@ -452,9 +452,9 @@
 label followed by the <code class="docutils literal notranslate"><span class="pre">_units</span></code> suffix.</p>
 <p>Besides directly accessing the metadata tree structure, e.g.
 <code class="docutils literal notranslate"><span class="pre">s.metadata.Signal.signal_type</span></code>, the HyperSpy methods
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.utils.DictionaryTreeBrowser.set_item" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.misc.utils.DictionaryTreeBrowser.set_item()</span></code></a>,
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.utils.DictionaryTreeBrowser.has_item" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.misc.utils.DictionaryTreeBrowser.has_item()</span></code></a> and
-<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.utils.DictionaryTreeBrowser.get_item" title="(in HyperSpy v2.1)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.misc.utils.DictionaryTreeBrowser.get_item()</span></code></a>
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.utils.DictionaryTreeBrowser.set_item" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.misc.utils.DictionaryTreeBrowser.set_item()</span></code></a>,
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.utils.DictionaryTreeBrowser.has_item" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.misc.utils.DictionaryTreeBrowser.has_item()</span></code></a> and
+<a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/utils/index.html#hyperspy.misc.utils.DictionaryTreeBrowser.get_item" title="(in HyperSpy v2.2)"><code class="xref py py-meth docutils literal notranslate"><span class="pre">hyperspy.misc.utils.DictionaryTreeBrowser.get_item()</span></code></a>
 can be used to add to, search for and read from items in the metadata tree,
 respectively.</p>
 <p>The EELS of EDS specific metadata structure is represented in the following
@@ -529,7 +529,7 @@
 </div>
 <section id="general">
 <h2>General<a class="headerlink" href="#general" title="Link to this heading">#</a></h2>
-<p>See <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#general-metadata" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy-Metadata-General</span></a>.</p>
+<p>See <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#general-metadata" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy-Metadata-General</span></a>.</p>
 </section>
 <section id="sample">
 <span id="sample-metadata"></span><h2>Sample<a class="headerlink" href="#sample" title="Link to this heading">#</a></h2>
@@ -544,7 +544,7 @@ <h2>General<a class="headerlink" href="#general" title="Link to this heading">#<
 and the L beta line of Nickel.</p>
 </dd>
 </dl>
-<p>See also <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#sample-metadata" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy-Metadata-Sample</span></a>.</p>
+<p>See also <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#sample-metadata" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy-Metadata-Sample</span></a>.</p>
 </section>
 <section id="signal">
 <h2>Signal<a class="headerlink" href="#signal" title="Link to this heading">#</a></h2>
@@ -554,7 +554,7 @@ <h2>Signal<a class="headerlink" href="#signal" title="Link to this heading">#</a
 specific signal class is <code class="docutils literal notranslate"><span class="pre">EELS</span></code>, <code class="docutils literal notranslate"><span class="pre">EDS</span></code>, <code class="docutils literal notranslate"><span class="pre">EDS_SEM</span></code> or <code class="docutils literal notranslate"><span class="pre">EDS_TEM</span></code>.</p>
 </dd>
 </dl>
-<p>See also <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#signal-metadata" title="(in HyperSpy v2.1)"><span class="xref std std-ref">HyperSpy-Metadata-Sample</span></a>.</p>
+<p>See also <a class="reference external" href="https://hyperspy.org/hyperspy-doc/current/reference/metadata.html#signal-metadata" title="(in HyperSpy v2.2)"><span class="xref std std-ref">HyperSpy-Metadata-Sample</span></a>.</p>
 </section>
 <section id="acquisition-instrument">
 <span id="source-metadata"></span><h2>Acquisition_instrument<a class="headerlink" href="#acquisition-instrument" title="Link to this heading">#</a></h2>