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accuracy_sim
accuracy_sim
 
 
dimensionality_sim
dimensionality_sim
 
 
gen_db
gen_db
 
 
grc_pc
grc_pc
 
 
mf_grc_analysis
mf_grc_analysis
 
 
mf_grc_model
mf_grc_model
 
 
pfs_pc_analysis
pfs_pc_analysis
 
 
purkinje
purkinje
 
 
README.md
README.md
 
 
check_random_grcs.py
check_random_grcs.py
 
 
grc_dendrite_count_dist_db_210225.gz
grc_dendrite_count_dist_db_210225.gz
 
 
grc_dendrite_len_dist_db_201109.gz
grc_dendrite_len_dist_db_201109.gz
 
 
grc_dendrite_len_dist_db_210225.gz
grc_dendrite_len_dist_db_210225.gz
 
 
lib_weight_correlation.py
lib_weight_correlation.py
 
 
mesh_tool.py
mesh_tool.py
 
 
my_plot.py
my_plot.py
 
 
my_plot_data.py
my_plot_data.py
 
 
pfs_density_db_210306.gz
pfs_density_db_210306.gz
 
 
rosette_size_db_210116.gz
rosette_size_db_210116.gz
 
 
tools.py
tools.py
 
 
tools2.py
tools2.py
 
 
tools_mf_graph.py
tools_mf_graph.py
 
 
tools_pattern.py
tools_pattern.py
 
 
weight_database.py
weight_database.py
 
 

README.md

The directory is generally seggregated by the analysis type (MF-GrC or GrC-PC).

  • analysis/
    • mf_grc_analysis/: MF-GrC analyses
    • grc_pc/: GrC-PC analyses
    • pfs_pc_analysis/: pf-GrC analyses
    • purkinje/: Code for detecting GrC axons to PC contacts
    • mf_grc_model/: Code for making MF-GrC simulation model used for dimensionality simulation
    • dimensionality_sim/: Simulation and plotting code for measuring dimensionality and separability signal
    • accuracy_sim/: Simulation and plotting code for PC accuracy simulation